RNA–Protein interactions for RNA: YLR399C

BDF1, Transcript of Protein involved in transcription initiation, yeast

Gene BDF1, Length 2,061 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
BDF1	YLR399C	PET191	Q02772	108 aa		10.85	□□□□□ -0.67
BDF1	YLR399C	POR1	P04840	283 aa	Known RBP	10.85	□□□□□ -0.67
BDF1	YLR399C	PRE1	P22141	198 aa	Known RBP	10.85	□□□□□ -0.67
BDF1	YLR399C	MEK1	P24719	497 aa	Predicted RBP	10.85	□□□□□ -0.67
BDF1	YLR399C	RNA15	P25299	296 aa	Predicted RBP	10.85	□□□□□ -0.67
BDF1	YLR399C	YCR025C	P25352	136 aa		10.85	□□□□□ -0.67
BDF1	YLR399C	CDC40	P40968	455 aa	Predicted RBP	10.85	□□□□□ -0.67
BDF1	YLR399C	IZH3	Q07959	543 aa		10.85	□□□□□ -0.67
BDF1	YLR399C	XYL2	Q07993	356 aa		10.85	□□□□□ -0.67
BDF1	YLR399C	YKR104W	P0CE69	306 aa		10.84	□□□□□ -0.67
BDF1	YLR399C	RPL20A	P0CX23	172 aa	Known RBP	10.84	□□□□□ -0.67
BDF1	YLR399C	RPL20B	P0CX24	172 aa	Predicted RBP	10.84	□□□□□ -0.67
BDF1	YLR399C	RPL1A	P0CX43	217 aa	Known RBP	10.84	□□□□□ -0.67
BDF1	YLR399C	RPL1B	P0CX44	217 aa	Known RBP	10.84	□□□□□ -0.67
BDF1	YLR399C	SPO7	P18410	259 aa		10.84	□□□□□ -0.67
BDF1	YLR399C	RPB8	P20436	146 aa		10.84	□□□□□ -0.67
BDF1	YLR399C	YKL075C	P36083	450 aa		10.84	□□□□□ -0.67
BDF1	YLR399C	PFA4	Q12006	378 aa		10.84	□□□□□ -0.67
BDF1	YLR399C	GPX1	P36014	167 aa		10.83	□□□□□ -0.68
BDF1	YLR399C	IRC24	P40580	263 aa		10.83	□□□□□ -0.68
BDF1	YLR399C	MTO1	P53070	669 aa		10.83	□□□□□ -0.68
BDF1	YLR399C	VPS68	Q12016	184 aa		10.83	□□□□□ -0.68
BDF1	YLR399C	NUP1	P20676	1076 aa		10.83	□□□□□ -0.68
BDF1	YLR399C	RNH201	P53942	307 aa		10.83	□□□□□ -0.68
BDF1	YLR399C	YLR030W	Q07967	263 aa		10.83	□□□□□ -0.68
BDF1	YLR399C	YMR084W	A2P2R3	262 aa		10.82	□□□□□ -0.68
BDF1	YLR399C	COX2	P00410	251 aa		10.82	□□□□□ -0.68
BDF1	YLR399C	MNS1	P32906	549 aa		10.82	□□□□□ -0.68
BDF1	YLR399C	LST7	P53237	242 aa		10.82	□□□□□ -0.68
BDF1	YLR399C	DFG5	Q05031	458 aa		10.82	□□□□□ -0.68
BDF1	YLR399C	MAK32	P23060	363 aa		10.81	□□□□□ -0.68
BDF1	YLR399C	TCA17	P32613	152 aa		10.81	□□□□□ -0.68
BDF1	YLR399C	XBP1	P40489	647 aa		10.81	□□□□□ -0.68
BDF1	YLR399C	HIT1	P46973	164 aa		10.81	□□□□□ -0.68
BDF1	YLR399C	RHO3	Q00245	231 aa	Known RBP	10.81	□□□□□ -0.68
BDF1	YLR399C	YMR090W	Q04304	227 aa	Known RBP	10.81	□□□□□ -0.68
BDF1	YLR399C	PRR2	Q12310	699 aa		10.81	□□□□□ -0.68
BDF1	YLR399C	FRE7	Q12333	620 aa		10.81	□□□□□ -0.68
BDF1	YLR399C	COX5B	P00425	151 aa		10.81	□□□□□ -0.68
BDF1	YLR399C	YLL053C	P0CD98	152 aa		10.81	□□□□□ -0.68
BDF1	YLR399C	PPA2	P28239	310 aa		10.81	□□□□□ -0.68
BDF1	YLR399C	YNL208W	P40159	199 aa	Known RBP	10.81	□□□□□ -0.68
BDF1	YLR399C	CIN5	P40917	295 aa		10.81	□□□□□ -0.68
BDF1	YLR399C	YLR179C	Q06252	201 aa	Known RBP	10.81	□□□□□ -0.68
BDF1	YLR399C	STP4	Q07351	490 aa		10.81	□□□□□ -0.68
BDF1	YLR399C	MCH1	Q07376	486 aa		10.81	□□□□□ -0.68
BDF1	YLR399C	BSC6	Q08280	497 aa		10.81	□□□□□ -0.68
BDF1	YLR399C	MPP6	P53725	186 aa	Predicted RBP	10.8	□□□□□ -0.68
BDF1	YLR399C	HHT1	P61830	136 aa		10.8	□□□□□ -0.68
BDF1	YLR399C	APS2	Q00381	147 aa		10.8	□□□□□ -0.68
BDF1	YLR399C	URA5	P13298	226 aa	Known RBP	10.8	□□□□□ -0.68
BDF1	YLR399C	YGL010W	P25338	174 aa		10.8	□□□□□ -0.68
BDF1	YLR399C	RFA3	P26755	122 aa	Known RBP	10.8	□□□□□ -0.68
BDF1	YLR399C	DAD2	P36162	133 aa		10.8	□□□□□ -0.68
BDF1	YLR399C	FRM2	P37261	193 aa		10.8	□□□□□ -0.68
BDF1	YLR399C	DAD3	P69850	94 aa		10.8	□□□□□ -0.68
BDF1	YLR399C	STP3	Q05937	343 aa		10.8	□□□□□ -0.68
BDF1	YLR399C	REX3	Q12090	404 aa		10.8	□□□□□ -0.68
BDF1	YLR399C	YEL057C	P39983	233 aa		10.79	□□□□□ -0.68
BDF1	YLR399C	RIB4	P50861	169 aa	Predicted RBP	10.79	□□□□□ -0.68
BDF1	YLR399C	ERG25	P53045	309 aa		10.79	□□□□□ -0.68
BDF1	YLR399C	FHN1	P53279	174 aa		10.79	□□□□□ -0.68
BDF1	YLR399C	HOL1	P53389	586 aa		10.79	□□□□□ -0.68
BDF1	YLR399C	MSO1	P53604	210 aa	Known RBP	10.79	□□□□□ -0.68
BDF1	YLR399C	UPS3	Q04006	179 aa		10.79	□□□□□ -0.68
BDF1	YLR399C	AHT1	P29589	182 aa		10.78	□□□□□ -0.68
BDF1	YLR399C	ERG2	P32352	222 aa		10.78	□□□□□ -0.68
BDF1	YLR399C	CWP1	P28319	239 aa		10.78	□□□□□ -0.68
BDF1	YLR399C	COQ10	Q08058	207 aa		10.78	□□□□□ -0.68
BDF1	YLR399C	ENB1	Q08299	606 aa		10.78	□□□□□ -0.68
BDF1	YLR399C	YBR197C	P38306	217 aa		10.77	□□□□□ -0.69
BDF1	YLR399C	SOL3	P38858	249 aa		10.77	□□□□□ -0.69
BDF1	YLR399C	PIC2	P40035	300 aa		10.77	□□□□□ -0.69
BDF1	YLR399C	MRPL1	Q04599	285 aa		10.77	□□□□□ -0.69
BDF1	YLR399C	UTR5	P32630	166 aa		10.77	□□□□□ -0.69
BDF1	YLR399C	GIS1	Q03833	894 aa		10.77	□□□□□ -0.69
BDF1	YLR399C	PAU23	Q07987	124 aa		10.77	□□□□□ -0.69
BDF1	YLR399C	TPT1	Q12272	230 aa	Known RBP	10.77	□□□□□ -0.69
BDF1	YLR399C	PAU17	Q12370	124 aa		10.77	□□□□□ -0.69
BDF1	YLR399C	MSW1	P04803	379 aa		10.76	□□□□□ -0.69
BDF1	YLR399C	MIX23	P38162	196 aa		10.76	□□□□□ -0.69
BDF1	YLR399C	TTI2	P47168	421 aa		10.76	□□□□□ -0.69
BDF1	YLR399C	RPN14	P53196	417 aa		10.76	□□□□□ -0.69
BDF1	YLR399C	ISA2	Q12425	185 aa		10.76	□□□□□ -0.69
BDF1	YLR399C	FMP49	A0A023PZB3	126 aa		10.75	□□□□□ -0.69
BDF1	YLR399C	YAL037W	P39728	267 aa		10.75	□□□□□ -0.69
BDF1	YLR399C	CYT1	P07143	309 aa		10.75	□□□□□ -0.69
BDF1	YLR399C	SWD2	P36104	329 aa	Predicted RBP	10.75	□□□□□ -0.69
BDF1	YLR399C	THG1	P53215	237 aa	Known RBP	10.75	□□□□□ -0.69
BDF1	YLR399C	SAM50	P53969	484 aa		10.75	□□□□□ -0.69
BDF1	YLR399C	NAT3	Q06504	195 aa		10.75	□□□□□ -0.69
BDF1	YLR399C	RFU1	Q08003	200 aa		10.75	□□□□□ -0.69
BDF1	YLR399C	MDH2	P22133	377 aa		10.74	□□□□□ -0.69
BDF1	YLR399C	PEX4	P29340	183 aa		10.74	□□□□□ -0.69
BDF1	YLR399C	SHB17	P36136	271 aa	Known RBP	10.74	□□□□□ -0.69
BDF1	YLR399C	DOG1	P38774	246 aa		10.74	□□□□□ -0.69
BDF1	YLR399C	PAC1	P39946	494 aa	Known RBP	10.74	□□□□□ -0.69
BDF1	YLR399C	CUZ1	P53899	274 aa		10.74	□□□□□ -0.69
BDF1	YLR399C	CGI121	Q03705	181 aa	Known RBP	10.74	□□□□□ -0.69
BDF1	YLR399C	YOL024W	Q08172	172 aa		10.74	□□□□□ -0.69

Retrieved 100 of 5,963 RNA–protein pairs in 34.5 ms