RNA–Protein interactions for RNA: YLR132C

USB1, Transcript of Putative phosphodiesterase specific for U6 snRNA 3' end modification, yeastyeast

Gene USB1, Length 873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
USB1YLR132C BNA6P43619 295 aa2.72□□□□□ -1.97
USB1YLR132C HOC1P47124 396 aa2.72□□□□□ -1.97
USB1YLR132C ASI3P53983 676 aa2.72□□□□□ -1.97
USB1YLR132C ATG17Q06410 417 aa2.72□□□□□ -1.97
USB1YLR132C SDO1Q07953 250 aaKnown RBP2.72□□□□□ -1.97
USB1YLR132C SNF8Q12483 233 aa2.72□□□□□ -1.97
USB1YLR132C HIS3P06633 220 aa2.71□□□□□ -1.98
USB1YLR132C ADE1P27616 306 aa2.71□□□□□ -1.98
USB1YLR132C MAL32P38158 584 aa2.71□□□□□ -1.98
USB1YLR132C FZO1P38297 855 aa2.71□□□□□ -1.98
USB1YLR132C SSH1P38353 490 aaKnown RBP2.71□□□□□ -1.98
USB1YLR132C BIG1P38813 335 aa2.71□□□□□ -1.98
USB1YLR132C AGX1P43567 385 aa2.71□□□□□ -1.98
USB1YLR132C SYF2P53277 215 aaPredicted RBP2.71□□□□□ -1.98
USB1YLR132C MAL12P53341 584 aa2.71□□□□□ -1.98
USB1YLR132C DIA1P54005 336 aa2.71□□□□□ -1.98
USB1YLR132C FEX1Q08913 375 aa2.71□□□□□ -1.98
USB1YLR132C FEX2Q08991 375 aa2.71□□□□□ -1.98
USB1YLR132C MDM32Q12171 622 aa2.71□□□□□ -1.98
USB1YLR132C NSP1P14907 823 aaKnown RBP2.7□□□□□ -1.98
USB1YLR132C DPB2P24482 689 aaPredicted RBP2.7□□□□□ -1.98
USB1YLR132C TAH1P25638 111 aaPredicted RBP2.7□□□□□ -1.98
USB1YLR132C RNP1P32385 249 aa2.7□□□□□ -1.98
USB1YLR132C ICE2P40499 491 aa2.7□□□□□ -1.98
USB1YLR132C YJR141WP47172 347 aaPredicted RBP2.7□□□□□ -1.98
USB1YLR132C RRS1Q08746 203 aaKnown RBP2.7□□□□□ -1.98
USB1YLR132C SNU23Q12368 194 aaPredicted RBP2.7□□□□□ -1.98
USB1YLR132C KRE1P17260 313 aa2.69□□□□□ -1.98
USB1YLR132C PHO13P19881 312 aa2.69□□□□□ -1.98
USB1YLR132C JEN1P36035 616 aa2.69□□□□□ -1.98
USB1YLR132C YJR149WP47177 404 aa2.69□□□□□ -1.98
USB1YLR132C USE1P53146 245 aa2.69□□□□□ -1.98
USB1YLR132C YPR098CQ06089 161 aa2.69□□□□□ -1.98
USB1YLR132C BOP2Q06150 570 aa2.69□□□□□ -1.98
USB1YLR132C YPR147CQ06522 304 aaKnown RBP2.69□□□□□ -1.98
USB1YLR132C PAM18Q07914 168 aa2.69□□□□□ -1.98
USB1YLR132C YBL112CQ3E7Y4 105 aa2.69□□□□□ -1.98
USB1YLR132C YBL008W-AQ3E821 79 aa2.69□□□□□ -1.98
USB1YLR132C YOR032W-AQ8TGS1 66 aa2.69□□□□□ -1.98
USB1YLR132C BLM10P43583 2143 aa2.68□□□□□ -1.98
USB1YLR132C YLR462WO13556 202 aa2.68□□□□□ -1.98
USB1YLR132C QCR6P00127 147 aa2.68□□□□□ -1.98
USB1YLR132C TDH2P00358 332 aaKnown RBP2.68□□□□□ -1.98
USB1YLR132C STP22P25604 385 aa2.68□□□□□ -1.98
USB1YLR132C UTR5P32630 166 aa2.68□□□□□ -1.98
USB1YLR132C MRPL39P36533 70 aa2.68□□□□□ -1.98
USB1YLR132C FMC1P40491 155 aa2.68□□□□□ -1.98
USB1YLR132C YJL028WP47062 111 aa2.68□□□□□ -1.98
USB1YLR132C LIA1P47120 325 aaKnown RBP2.68□□□□□ -1.98
USB1YLR132C MDM34P53083 459 aa2.68□□□□□ -1.98
USB1YLR132C YMR166CQ03829 368 aa2.68□□□□□ -1.98
USB1YLR132C YDR124WQ04608 324 aa2.68□□□□□ -1.98
USB1YLR132C HRT1Q08273 121 aa2.68□□□□□ -1.98
USB1YLR132C CSM4Q08955 156 aa2.68□□□□□ -1.98
USB1YLR132C DAS2Q12084 232 aa2.68□□□□□ -1.98
USB1YLR132C COS2P0CX12 379 aa2.67□□□□□ -1.98
USB1YLR132C COS3P0CX13 379 aa2.67□□□□□ -1.98
USB1YLR132C SRB4P32569 687 aa2.67□□□□□ -1.98
USB1YLR132C SUI1P32911 108 aaKnown RBP2.67□□□□□ -1.98
USB1YLR132C SDH4P37298 181 aa2.67□□□□□ -1.98
USB1YLR132C SMB1P40018 196 aaKnown RBP2.67□□□□□ -1.98
USB1YLR132C GOT1Q03554 138 aa2.67□□□□□ -1.98
USB1YLR132C KRE28Q04431 385 aa2.67□□□□□ -1.98
USB1YLR132C MSH5Q12175 901 aa2.67□□□□□ -1.98
USB1YLR132C YOR029WQ12243 111 aa2.67□□□□□ -1.98
USB1YLR132C FLO9P39712 1322 aa2.67□□□□□ -1.98
USB1YLR132C HOM6P31116 359 aaKnown RBP2.66□□□□□ -1.98
USB1YLR132C RPT5P33297 434 aaKnown RBP2.66□□□□□ -1.98
USB1YLR132C YER084WP40057 128 aa2.66□□□□□ -1.98
USB1YLR132C APQ12P40532 138 aa2.66□□□□□ -1.98
USB1YLR132C FCF1Q05498 189 aaPredicted RBP2.66□□□□□ -1.98
USB1YLR132C SPO77Q06134 477 aa2.66□□□□□ -1.98
USB1YLR132C YPR174CQ06616 221 aaPredicted RBP2.66□□□□□ -1.98
USB1YLR132C RRP40Q08285 240 aaKnown RBP2.66□□□□□ -1.98
USB1YLR132C Q0297Q9ZZV8 51 aa2.66□□□□□ -1.98
USB1YLR132C TOM40P23644 387 aaKnown RBP2.65□□□□□ -1.99
USB1YLR132C YHB1P39676 399 aaKnown RBP2.65□□□□□ -1.99
USB1YLR132C YER188WP40103 239 aa2.65□□□□□ -1.99
USB1YLR132C SRL4Q03085 281 aa2.65□□□□□ -1.99
USB1YLR132C GAS3Q03655 524 aa2.65□□□□□ -1.99
USB1YLR132C CGI121Q03705 181 aaKnown RBP2.65□□□□□ -1.99
USB1YLR132C YCT1Q12235 531 aa2.65□□□□□ -1.99
USB1YLR132C YPL247CQ12523 523 aa2.65□□□□□ -1.99
USB1YLR132C YGP1P38616 354 aaKnown RBP2.64□□□□□ -1.99
USB1YLR132C GRE3P38715 327 aaKnown RBP RIP-Chip data2.64□□□□□ -1.99not detected
USB1YLR132C TCD1P38756 429 aa2.64□□□□□ -1.99
USB1YLR132C MNN5P46982 586 aa2.64□□□□□ -1.99
USB1YLR132C RAD17P48581 401 aa2.64□□□□□ -1.99
USB1YLR132C BOL2P53082 120 aa2.64□□□□□ -1.99
USB1YLR132C MRH4P53166 561 aa2.64□□□□□ -1.99
USB1YLR132C GRH1Q04410 372 aaKnown RBP2.64□□□□□ -1.99
USB1YLR132C SPG4Q04438 115 aa2.64□□□□□ -1.99
USB1YLR132C CDC123Q05791 360 aa2.64□□□□□ -1.99
USB1YLR132C SYC1Q08553 188 aaPredicted RBP2.64□□□□□ -1.99
USB1YLR132C YPR011CQ12251 326 aa2.64□□□□□ -1.99
USB1YLR132C ATG31Q12421 196 aa2.64□□□□□ -1.99
USB1YLR132C MDN1Q12019 4910 aaKnown RBP2.64□□□□□ -1.99
USB1YLR132C CDC36P06100 191 aaPredicted RBP2.63□□□□□ -1.99
USB1YLR132C YSF3P0C074 85 aaPredicted RBP2.63□□□□□ -1.99
USB1YLR132C YFR010W-AP0C5N0 62 aa2.63□□□□□ -1.99
Retrieved 100 of 5,963 RNA–protein pairs in 41.4 ms