RNA–Protein interactions for RNA: YKL139W

CTK1, Transcript of Catalytic (alpha) subunit of C-terminal domain kinase I (CTDK-I), yeastyeast

Gene CTK1, Length 1,587 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTK1YKL139W RPL35BP0CX85 120 aaKnown RBP2.76□□□□□ -1.97
CTK1YKL139W DPM1P14020 267 aaKnown RBP2.76□□□□□ -1.97
CTK1YKL139W RSA4P25382 515 aaKnown RBP2.76□□□□□ -1.97
CTK1YKL139W SHG1P38337 142 aa2.76□□□□□ -1.97
CTK1YKL139W CTR2P38865 189 aa2.76□□□□□ -1.97
CTK1YKL139W SMD3P43321 101 aaKnown RBP2.76□□□□□ -1.97
CTK1YKL139W YIP3P53633 176 aa2.76□□□□□ -1.97
CTK1YKL139W FUS2Q05670 677 aa2.76□□□□□ -1.97
CTK1YKL139W GGA1Q06336 557 aa2.76□□□□□ -1.97
CTK1YKL139W NOC4Q06512 552 aaPredicted RBP2.76□□□□□ -1.97
CTK1YKL139W IGO2Q9P305 131 aa2.76□□□□□ -1.97
CTK1YKL139W POP4P38336 279 aa2.75□□□□□ -1.97
CTK1YKL139W YGL088WP53151 121 aa2.75□□□□□ -1.97
CTK1YKL139W ARO80Q04052 950 aa2.75□□□□□ -1.97
CTK1YKL139W YET3Q07451 203 aa2.75□□□□□ -1.97
CTK1YKL139W PRM7Q12459 698 aa2.75□□□□□ -1.97
CTK1YKL139W RPL9AP05738 191 aaKnown RBP2.74□□□□□ -1.97
CTK1YKL139W MIG1P27705 504 aa2.74□□□□□ -1.97
CTK1YKL139W UTP30P36144 274 aaKnown RBP2.74□□□□□ -1.97
CTK1YKL139W AST2P39945 430 aaKnown RBP2.74□□□□□ -1.97
CTK1YKL139W HMF1P40037 129 aaKnown RBP2.74□□□□□ -1.97
CTK1YKL139W RPL9BP51401 191 aaKnown RBP2.74□□□□□ -1.97
CTK1YKL139W YGR026WP53217 278 aa2.74□□□□□ -1.97
CTK1YKL139W RTC4P53850 401 aa2.74□□□□□ -1.97
CTK1YKL139W NRK1P53915 240 aa2.74□□□□□ -1.97
CTK1YKL139W COG5P53951 403 aa2.74□□□□□ -1.97
CTK1YKL139W GRX8Q05926 109 aa2.74□□□□□ -1.97
CTK1YKL139W AKR2Q12013 749 aa2.74□□□□□ -1.97
CTK1YKL139W YPL162CQ12042 273 aa2.74□□□□□ -1.97
CTK1YKL139W PSF1Q12488 208 aa2.74□□□□□ -1.97
CTK1YKL139W YLR156WP0CE96 114 aa2.74□□□□□ -1.97
CTK1YKL139W YLR159WP0CE97 114 aa2.74□□□□□ -1.97
CTK1YKL139W YLR161WP0CE98 114 aa2.74□□□□□ -1.97
CTK1YKL139W GCY1P14065 312 aaKnown RBP RIP-Chip data2.74□□□□□ -1.97not detected
CTK1YKL139W MAG1P22134 296 aaKnown RBP2.74□□□□□ -1.97
CTK1YKL139W TAH1P25638 111 aaPredicted RBP2.74□□□□□ -1.97
CTK1YKL139W VMA11P32842 164 aa2.74□□□□□ -1.97
CTK1YKL139W PDS1P40316 373 aaPredicted RBP2.74□□□□□ -1.97
CTK1YKL139W RSM25P40496 264 aa2.74□□□□□ -1.97
CTK1YKL139W TRM12Q04235 462 aa2.74□□□□□ -1.97
CTK1YKL139W SIR2P06700 562 aa2.73□□□□□ -1.97
CTK1YKL139W GRX2P17695 143 aaKnown RBP2.73□□□□□ -1.97
CTK1YKL139W CCA1P21269 546 aa2.73□□□□□ -1.97
CTK1YKL139W SEC17P32602 292 aa2.73□□□□□ -1.97
CTK1YKL139W VPS51P36116 164 aa2.73□□□□□ -1.97
CTK1YKL139W SRP14P38985 146 aa2.73□□□□□ -1.97
CTK1YKL139W MRPL49P40858 161 aaPredicted RBP2.73□□□□□ -1.97
CTK1YKL139W APJ1P53940 528 aa2.73□□□□□ -1.97
CTK1YKL139W PRM15Q03262 622 aa2.73□□□□□ -1.97
CTK1YKL139W YOL024WQ08172 172 aa2.73□□□□□ -1.97
CTK1YKL139W YFR032C-BQ8TGU2 87 aa2.73□□□□□ -1.97
CTK1YKL139W IKI3Q06706 1349 aaKnown RBP2.73□□□□□ -1.97
CTK1YKL139W CDC8P00572 216 aa2.72□□□□□ -1.97
CTK1YKL139W REP2P03872 296 aa2.72□□□□□ -1.97
CTK1YKL139W TRX3P25372 127 aa2.72□□□□□ -1.97
CTK1YKL139W SKG1P36169 355 aa2.72□□□□□ -1.97
CTK1YKL139W YNL184CP53876 108 aa2.72□□□□□ -1.97
CTK1YKL139W YLR036CQ07986 203 aa2.72□□□□□ -1.97
CTK1YKL139W PUT1P09368 476 aa2.71□□□□□ -1.98
CTK1YKL139W TRR1P29509 319 aaKnown RBP2.71□□□□□ -1.98
CTK1YKL139W SDH4P37298 181 aa2.71□□□□□ -1.98
CTK1YKL139W SPO73P40031 143 aa2.71□□□□□ -1.98
CTK1YKL139W UBC12P52491 188 aa2.71□□□□□ -1.98
CTK1YKL139W RDS3Q06835 107 aaPredicted RBP2.71□□□□□ -1.98
CTK1YKL139W SPA2P23201 1466 aaKnown RBP2.71□□□□□ -1.98
CTK1YKL139W SNX4P47057 423 aa2.7□□□□□ -1.98
CTK1YKL139W YJR146WP47174 117 aa2.7□□□□□ -1.98
CTK1YKL139W DSK2P48510 373 aa2.7□□□□□ -1.98
CTK1YKL139W YLR460CP54007 376 aa2.7□□□□□ -1.98
CTK1YKL139W YDR249CQ03787 373 aa2.7□□□□□ -1.98
CTK1YKL139W MCP1Q12106 302 aa2.7□□□□□ -1.98
CTK1YKL139W RPL26AP05743 127 aaKnown RBP2.7□□□□□ -1.98
CTK1YKL139W NOP1P15646 327 aaKnown RBP2.7□□□□□ -1.98
CTK1YKL139W SCM4P32564 187 aa2.7□□□□□ -1.98
CTK1YKL139W GLE2P40066 365 aa2.7□□□□□ -1.98
CTK1YKL139W YJL144WP47009 104 aa2.7□□□□□ -1.98
CTK1YKL139W RPL26BP53221 127 aaKnown RBP2.7□□□□□ -1.98
CTK1YKL139W MBF1O14467 151 aaKnown RBP2.69□□□□□ -1.98
CTK1YKL139W MSW1P04803 379 aa2.69□□□□□ -1.98
CTK1YKL139W BET1P22804 142 aa2.69□□□□□ -1.98
CTK1YKL139W CNB1P25296 175 aa2.69□□□□□ -1.98
CTK1YKL139W YKR041WP36134 250 aa2.69□□□□□ -1.98
CTK1YKL139W YNL140CP53910 189 aa2.69□□□□□ -1.98
CTK1YKL139W ARR2Q06597 130 aa2.69□□□□□ -1.98
CTK1YKL139W YPR096CO13587 100 aa2.68□□□□□ -1.98
CTK1YKL139W RPB3P16370 318 aaKnown RBP2.68□□□□□ -1.98
CTK1YKL139W SCO1P23833 295 aa2.68□□□□□ -1.98
CTK1YKL139W YHL026CP38740 315 aa2.68□□□□□ -1.98
CTK1YKL139W YER121WP40076 114 aa2.68□□□□□ -1.98
CTK1YKL139W MNN5P46982 586 aa2.68□□□□□ -1.98
CTK1YKL139W SLM2P53955 656 aa2.68□□□□□ -1.98
CTK1YKL139W SPG3Q04398 127 aaPredicted RBP2.68□□□□□ -1.98
CTK1YKL139W BRX1Q08235 291 aaKnown RBP2.68□□□□□ -1.98
CTK1YKL139W SNF4P12904 322 aa2.67□□□□□ -1.98
CTK1YKL139W URA5P13298 226 aaKnown RBP2.67□□□□□ -1.98
CTK1YKL139W YCR090CP25654 182 aaKnown RBP2.67□□□□□ -1.98
CTK1YKL139W YER076CP40049 302 aa2.67□□□□□ -1.98
CTK1YKL139W ICE2P40499 491 aa2.67□□□□□ -1.98
CTK1YKL139W AIF1P52923 378 aa2.67□□□□□ -1.98
CTK1YKL139W SWP1Q02795 286 aa2.67□□□□□ -1.98
Retrieved 100 of 5,963 RNA–protein pairs in 20.4 ms