RNA–Protein interactions for RNA: YHL022C

SPO11, Transcript of Meiosis-specific protein that initiates meiotic recombination, yeast

Gene SPO11, Length 1,197 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPO11	YHL022C	SPT3	P06844	337 aa		1.07	□□□□□ -2.24
SPO11	YHL022C	YER188C-A	P0C0V2	99 aa		1.07	□□□□□ -2.24
SPO11	YHL022C	RPO26	P20435	155 aa		1.07	□□□□□ -2.24
SPO11	YHL022C	MRPL17	P36528	281 aa		1.07	□□□□□ -2.24
SPO11	YHL022C	YEL067C	P39978	195 aa		1.07	□□□□□ -2.24
SPO11	YHL022C	NUP84	P52891	726 aa		1.07	□□□□□ -2.24
SPO11	YHL022C	PRM8	P53174	237 aa		1.07	□□□□□ -2.24
SPO11	YHL022C	GAS3	Q03655	524 aa		1.07	□□□□□ -2.24
SPO11	YHL022C	TUS1	Q06412	1307 aa		1.07	□□□□□ -2.24
SPO11	YHL022C	AQY2	P0CD90	149 aa		1.06	□□□□□ -2.24
SPO11	YHL022C	KNH1	P50112	268 aa		1.06	□□□□□ -2.24
SPO11	YHL022C	YNL134C	P53912	376 aa	Known RBP	1.06	□□□□□ -2.24
SPO11	YHL022C	SRL4	Q03085	281 aa		1.06	□□□□□ -2.24
SPO11	YHL022C	GPM2	Q12008	311 aa		1.06	□□□□□ -2.24
SPO11	YHL022C	ATG40	Q99325	256 aa		1.06	□□□□□ -2.24
SPO11	YHL022C	PBN1	P25580	416 aa		1.05	□□□□□ -2.24
SPO11	YHL022C	NTF2	P33331	125 aa	Known RBP	1.05	□□□□□ -2.24
SPO11	YHL022C	SHE2	P36068	246 aa	Known RBP RIP-Chip data	1.05	□□□□□ -2.24	not detected
SPO11	YHL022C	RRT8	Q08219	342 aa		1.05	□□□□□ -2.24
SPO11	YHL022C	MED4	Q12343	284 aa		1.05	□□□□□ -2.24
SPO11	YHL022C	CDC10	P25342	322 aa	Known RBP	1.04	□□□□□ -2.24
SPO11	YHL022C	HUA1	P40325	198 aa		1.04	□□□□□ -2.24
SPO11	YHL022C	NSP1	P14907	823 aa	Known RBP	1.03	□□□□□ -2.24
SPO11	YHL022C	YUH1	P35127	236 aa		1.03	□□□□□ -2.24
SPO11	YHL022C	SRY1	P36007	326 aa		1.03	□□□□□ -2.24
SPO11	YHL022C	GVP36	P40531	326 aa	Known RBP	1.03	□□□□□ -2.24
SPO11	YHL022C	YAE1	P47118	141 aa	Predicted RBP	1.03	□□□□□ -2.24
SPO11	YHL022C	DRS2	P39524	1355 aa		1.03	□□□□□ -2.24
SPO11	YHL022C	OPY1	P38271	328 aa		1.02	□□□□□ -2.25
SPO11	YHL022C	FMC1	P40491	155 aa		1.02	□□□□□ -2.25
SPO11	YHL022C	TIM9	O74700	87 aa		1.01	□□□□□ -2.25
SPO11	YHL022C	LDB7	P38210	180 aa		1.01	□□□□□ -2.25
SPO11	YHL022C	SOK1	P40317	901 aa		1.01	□□□□□ -2.25
SPO11	YHL022C	EAF6	P47128	113 aa		1.01	□□□□□ -2.25
SPO11	YHL022C	RPL37B	P51402	88 aa	Known RBP	1.01	□□□□□ -2.25
SPO11	YHL022C	CDC123	Q05791	360 aa		1.01	□□□□□ -2.25
SPO11	YHL022C	MCP1	Q12106	302 aa		1.01	□□□□□ -2.25
SPO11	YHL022C	YLR236C	A0A023PZG4	107 aa		1	□□□□□ -2.25
SPO11	YHL022C	URA6	P15700	204 aa		1	□□□□□ -2.25
SPO11	YHL022C	SEC17	P32602	292 aa		1	□□□□□ -2.25
SPO11	YHL022C	SKG1	P36169	355 aa		1	□□□□□ -2.25
SPO11	YHL022C	YBR285W	P38354	144 aa		1	□□□□□ -2.25
SPO11	YHL022C	SIP3	P38717	1229 aa		1	□□□□□ -2.25
SPO11	YHL022C	EDC3	P39998	551 aa	Known RBP	1	□□□□□ -2.25
SPO11	YHL022C	FLX1	P40464	311 aa		1	□□□□□ -2.25
SPO11	YHL022C	LIA1	P47120	325 aa	Known RBP	1	□□□□□ -2.25
SPO11	YHL022C	ARO8	P53090	500 aa	Known RBP	1	□□□□□ -2.25
SPO11	YHL022C	RCE1	Q03530	315 aa		1	□□□□□ -2.25
SPO11	YHL022C	AIM36	Q03798	255 aa		1	□□□□□ -2.25
SPO11	YHL022C	YLR283W	Q05867	314 aa		1	□□□□□ -2.25
SPO11	YHL022C	TDA8	Q6B2U8	126 aa		1	□□□□□ -2.25
SPO11	YHL022C	TCA17	P32613	152 aa		0.99	□□□□□ -2.25
SPO11	YHL022C	PRE6	P40303	254 aa	Known RBP	0.99	□□□□□ -2.25
SPO11	YHL022C	FAR7	P43592	221 aa		0.99	□□□□□ -2.25
SPO11	YHL022C	RPC17	P47076	161 aa		0.99	□□□□□ -2.25
SPO11	YHL022C	CUE4	Q04201	117 aa	Predicted RBP	0.99	□□□□□ -2.25
SPO11	YHL022C	COX15	P40086	486 aa		0.98	□□□□□ -2.25
SPO11	YHL022C	FYV6	P53913	173 aa		0.98	□□□□□ -2.25
SPO11	YHL022C	CDC28	P00546	298 aa	Known RBP	0.97	□□□□□ -2.25
SPO11	YHL022C	SEC11	P15367	167 aa		0.97	□□□□□ -2.25
SPO11	YHL022C	DBF2	P22204	572 aa		0.97	□□□□□ -2.25
SPO11	YHL022C	APS1	P35181	156 aa		0.97	□□□□□ -2.25
SPO11	YHL022C	YFL065C	P43539	102 aa		0.97	□□□□□ -2.25
SPO11	YHL022C	MIC26	P50087	233 aa		0.97	□□□□□ -2.25
SPO11	YHL022C	BRR6	P53062	197 aa		0.97	□□□□□ -2.25
SPO11	YHL022C	CWC27	Q02770	301 aa		0.97	□□□□□ -2.25
SPO11	YHL022C	SIR2	P06700	562 aa		0.96	□□□□□ -2.26
SPO11	YHL022C	UTP30	P36144	274 aa	Known RBP	0.96	□□□□□ -2.26
SPO11	YHL022C	YHL042W	P38729	150 aa		0.96	□□□□□ -2.26
SPO11	YHL022C	YNL247W	P53852	767 aa	Known RBP	0.96	□□□□□ -2.26
SPO11	YHL022C	YHR007C-A	Q07074	71 aa		0.96	□□□□□ -2.26
SPO11	YHL022C	INO80	P53115	1489 aa		0.96	□□□□□ -2.26
SPO11	YHL022C	SSO1	P32867	290 aa		0.95	□□□□□ -2.26
SPO11	YHL022C	PET117	Q02771	107 aa		0.95	□□□□□ -2.26
SPO11	YHL022C	YHR212W-A	P0CX91	67 aa		0.94	□□□□□ -2.26
SPO11	YHL022C	URA5	P13298	226 aa	Known RBP	0.94	□□□□□ -2.26
SPO11	YHL022C	YCR016W	P25617	290 aa	Known RBP	0.94	□□□□□ -2.26
SPO11	YHL022C	VMA22	P38784	181 aa		0.94	□□□□□ -2.26
SPO11	YHL022C	YER034W	P40022	185 aa	Known RBP	0.94	□□□□□ -2.26
SPO11	YHL022C	BXI1	P48558	297 aa		0.94	□□□□□ -2.26
SPO11	YHL022C	RAD28	Q12021	506 aa		0.94	□□□□□ -2.26
SPO11	YHL022C	ACC1	Q00955	2233 aa	Known RBP	0.94	□□□□□ -2.26
SPO11	YHL022C	YDR249C	Q03787	373 aa		0.93	□□□□□ -2.26
SPO11	YHL022C	MATALPHA1	P0CY06	175 aa		0.92	□□□□□ -2.26
SPO11	YHL022C	HMLALPHA1	P0CY07	175 aa		0.92	□□□□□ -2.26
SPO11	YHL022C	BET1	P22804	142 aa		0.92	□□□□□ -2.26
SPO11	YHL022C	MSN4	P33749	630 aa		0.92	□□□□□ -2.26
SPO11	YHL022C	LAP3	Q01532	483 aa	Known RBP RIP-Chip data	0.92	□□□□□ -2.26	not detected
SPO11	YHL022C	SLH1	P53327	1967 aa	Known RBP	0.92	□□□□□ -2.26
SPO11	YHL022C	KSS1	P14681	368 aa		0.91	□□□□□ -2.26
SPO11	YHL022C	IDH1	P28834	360 aa	Known RBP RIP-Chip data	0.91	□□□□□ -2.26	not detected
SPO11	YHL022C	YOL160W	Q08321	113 aa		0.91	□□□□□ -2.26
SPO11	YHL022C	YIL177C	P40434	1758 aa		0.91	□□□□□ -2.26
SPO11	YHL022C	YJL225C	P40889	1758 aa		0.91	□□□□□ -2.26
SPO11	YHL022C	SEC4	P07560	215 aa	Known RBP	0.9	□□□□□ -2.27
SPO11	YHL022C	AST2	P39945	430 aa	Known RBP	0.9	□□□□□ -2.27
SPO11	YHL022C	RMD6	P39975	231 aa		0.9	□□□□□ -2.27
SPO11	YHL022C	HYR1	P40581	163 aa	Known RBP	0.9	□□□□□ -2.27
SPO11	YHL022C	YGR050C	P53231	118 aa		0.9	□□□□□ -2.27
SPO11	YHL022C	YDR274C	P87283	123 aa		0.9	□□□□□ -2.27

Retrieved 100 of 5,963 RNA–protein pairs in 70.5 ms