RNA–Protein interactions for RNA: YGR135W

PRE9, Transcript of Alpha 3 subunit of the 20S proteasome, yeastyeast

Gene PRE9, Length 777 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE9YGR135W PAA1Q12447 191 aaKnown RBP3.75□□□□□ -1.81
PRE9YGR135W AIM45Q12480 344 aaKnown RBP3.75□□□□□ -1.81
PRE9YGR135W SET6Q12529 373 aa3.75□□□□□ -1.81
PRE9YGR135W TPI1P00942 248 aaKnown RBP3.74□□□□□ -1.81
PRE9YGR135W STE7P06784 515 aa3.74□□□□□ -1.81
PRE9YGR135W ADH3P07246 375 aaKnown RBP3.74□□□□□ -1.81
PRE9YGR135W CPA1P07258 411 aaKnown RBP3.74□□□□□ -1.81
PRE9YGR135W ARF2P19146 181 aaKnown RBP3.74□□□□□ -1.81
PRE9YGR135W SEC59P20048 519 aa3.74□□□□□ -1.81
PRE9YGR135W SCL1P21243 252 aaKnown RBP3.74□□□□□ -1.81
PRE9YGR135W YSR3P23501 404 aa3.74□□□□□ -1.81
PRE9YGR135W CPR4P25334 318 aa3.74□□□□□ -1.81
PRE9YGR135W MGM101P32787 269 aaKnown RBP3.74□□□□□ -1.81
PRE9YGR135W SNC2P33328 115 aa3.74□□□□□ -1.81
PRE9YGR135W ECM15P35195 104 aa3.74□□□□□ -1.81
PRE9YGR135W HOT13P36078 116 aa3.74□□□□□ -1.81
PRE9YGR135W MAL32P38158 584 aa3.74□□□□□ -1.81
PRE9YGR135W SDS24P38314 527 aa3.74□□□□□ -1.81
PRE9YGR135W VPS52P39904 641 aa3.74□□□□□ -1.81
PRE9YGR135W PAC2P39937 518 aa3.74□□□□□ -1.81
PRE9YGR135W SMB1P40018 196 aaKnown RBP3.74□□□□□ -1.81
PRE9YGR135W RAD17P48581 401 aa3.74□□□□□ -1.81
PRE9YGR135W NIF3P53081 288 aa3.74□□□□□ -1.81
PRE9YGR135W YGL204CP53089 101 aa3.74□□□□□ -1.81
PRE9YGR135W MAL12P53341 584 aa3.74□□□□□ -1.81
PRE9YGR135W ACT1P60010 375 aaKnown RBP3.74□□□□□ -1.81
PRE9YGR135W BUD25P85052 153 aa3.74□□□□□ -1.81
PRE9YGR135W CUE4Q04201 117 aaPredicted RBP3.74□□□□□ -1.81
PRE9YGR135W SEC13Q04491 297 aaKnown RBP3.74□□□□□ -1.81
PRE9YGR135W TAZ1Q06510 381 aa3.74□□□□□ -1.81
PRE9YGR135W RRT7Q07829 113 aa3.74□□□□□ -1.81
PRE9YGR135W ORT1Q12375 292 aa3.74□□□□□ -1.81
PRE9YGR135W TRR1P29509 319 aaKnown RBP3.73□□□□□ -1.81
PRE9YGR135W DEG1P31115 442 aaKnown RBP3.73□□□□□ -1.81
PRE9YGR135W FMT1P32785 401 aa3.73□□□□□ -1.81
PRE9YGR135W MNS1P32906 549 aa3.73□□□□□ -1.81
PRE9YGR135W YKL097CP34245 136 aa3.73□□□□□ -1.81
PRE9YGR135W PAN3P36102 679 aaPredicted RBP3.73□□□□□ -1.81
PRE9YGR135W MRPL28P36527 147 aa3.73□□□□□ -1.81
PRE9YGR135W YPT31P38555 223 aaKnown RBP3.73□□□□□ -1.81
PRE9YGR135W TRR2P38816 342 aa3.73□□□□□ -1.81
PRE9YGR135W FLX1P40464 311 aa3.73□□□□□ -1.81
PRE9YGR135W PAU15P40585 124 aa3.73□□□□□ -1.81
PRE9YGR135W SYS1P41544 203 aa3.73□□□□□ -1.81
PRE9YGR135W CIN2P46670 268 aa3.73□□□□□ -1.81
PRE9YGR135W YJR056CP47115 236 aa3.73□□□□□ -1.81
PRE9YGR135W ADO1P47143 340 aaKnown RBP3.73□□□□□ -1.81
PRE9YGR135W AVT4P50944 713 aa3.73□□□□□ -1.81
PRE9YGR135W EMC4P53073 190 aa3.73□□□□□ -1.81
PRE9YGR135W SAM50P53969 484 aa3.73□□□□□ -1.81
PRE9YGR135W SYM1Q06563 197 aa3.73□□□□□ -1.81
PRE9YGR135W MRX9Q07349 420 aaKnown RBP3.73□□□□□ -1.81
PRE9YGR135W BRX1Q08235 291 aaKnown RBP3.73□□□□□ -1.81
PRE9YGR135W YPQ1Q12010 308 aa3.73□□□□□ -1.81
PRE9YGR135W ATX2Q12067 313 aa3.73□□□□□ -1.81
PRE9YGR135W YDL211CQ12121 372 aa3.73□□□□□ -1.81
PRE9YGR135W YPR064WQ12492 139 aa3.73□□□□□ -1.81
PRE9YGR135W COX19Q3E731 98 aa3.73□□□□□ -1.81
PRE9YGR135W YCL001W-BQ96VH2 84 aa3.73□□□□□ -1.81
PRE9YGR135W UBR1P19812 1950 aa3.72□□□□□ -1.81
PRE9YGR135W SLH1P53327 1967 aaKnown RBP3.72□□□□□ -1.81
PRE9YGR135W MCK1P21965 375 aaKnown RBP3.72□□□□□ -1.81
PRE9YGR135W PPH21P23594 369 aa3.72□□□□□ -1.81
PRE9YGR135W PBN1P25580 416 aa3.72□□□□□ -1.81
PRE9YGR135W SHG1P38337 142 aa3.72□□□□□ -1.81
PRE9YGR135W ECM34P38728 170 aa3.72□□□□□ -1.81
PRE9YGR135W GIM4P40005 111 aaKnown RBP3.72□□□□□ -1.81
PRE9YGR135W SPC25P40014 221 aa3.72□□□□□ -1.81
PRE9YGR135W BTT1P40314 149 aaPredicted RBP3.72□□□□□ -1.81
PRE9YGR135W SFH5P47008 294 aa3.72□□□□□ -1.81
PRE9YGR135W GPI14P47088 403 aaKnown RBP3.72□□□□□ -1.81
PRE9YGR135W YDL186WP48568 277 aa3.72□□□□□ -1.81
PRE9YGR135W YGL235WP53071 178 aa3.72□□□□□ -1.81
PRE9YGR135W HCH1P53834 153 aa3.72□□□□□ -1.81
PRE9YGR135W GIM3P53900 129 aa3.72□□□□□ -1.81
PRE9YGR135W CYT2Q00873 224 aa3.72□□□□□ -1.81
PRE9YGR135W RSM10Q03201 203 aa3.72□□□□□ -1.81
PRE9YGR135W YDR415CQ04033 374 aaPredicted RBP3.72□□□□□ -1.81
PRE9YGR135W NAT4Q04751 285 aa3.72□□□□□ -1.81
PRE9YGR135W PAL1Q05518 499 aaKnown RBP3.72□□□□□ -1.81
PRE9YGR135W BNA5Q05979 453 aa3.72□□□□□ -1.81
PRE9YGR135W CTR3Q06686 241 aa3.72□□□□□ -1.81
PRE9YGR135W FCF2Q12035 217 aaPredicted RBP3.72□□□□□ -1.81
PRE9YGR135W YLR118CQ12354 227 aa3.72□□□□□ -1.81
PRE9YGR135W HMS1Q12398 434 aa3.72□□□□□ -1.81
PRE9YGR135W YLR146W-AQ2V2P1 62 aa3.72□□□□□ -1.81
PRE9YGR135W DET1Q99288 334 aaKnown RBP3.72□□□□□ -1.81
PRE9YGR135W ODC2Q99297 307 aa3.72□□□□□ -1.81
PRE9YGR135W MSB2P32334 1306 aa3.71□□□□□ -1.81
PRE9YGR135W GDH1P07262 454 aaKnown RBP3.71□□□□□ -1.82
PRE9YGR135W MTF1P14908 341 aaKnown RBP3.71□□□□□ -1.82
PRE9YGR135W FUN14P18411 198 aa3.71□□□□□ -1.82
PRE9YGR135W LSB5P25369 354 aa3.71□□□□□ -1.82
PRE9YGR135W MET30P39014 640 aa3.71□□□□□ -1.82
PRE9YGR135W DLS1P40366 167 aa3.71□□□□□ -1.82
PRE9YGR135W AVT7P40501 490 aa3.71□□□□□ -1.82
PRE9YGR135W BNS1P50084 137 aa3.71□□□□□ -1.82
PRE9YGR135W MGA1P53050 456 aa3.71□□□□□ -1.82
PRE9YGR135W IZH1Q03419 316 aa3.71□□□□□ -1.82
PRE9YGR135W TMA23Q03525 211 aa3.71□□□□□ -1.82
Retrieved 100 of 5,963 RNA–protein pairs in 14.3 ms