RNA–Protein interactions for RNA: YDR489W

SLD5, Transcript of Subunit of the GINS complex (Sld5p, Psf1p, Psf2p, Psf3p), yeastyeast

Gene SLD5, Length 885 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SLD5YDR489W YLR159WP0CE97 114 aa1.76□□□□□ -2.13
SLD5YDR489W YLR161WP0CE98 114 aa1.76□□□□□ -2.13
SLD5YDR489W NTG1P31378 399 aa1.76□□□□□ -2.13
SLD5YDR489W UTP30P36144 274 aaKnown RBP1.76□□□□□ -2.13
SLD5YDR489W ERV15P38312 142 aa1.76□□□□□ -2.13
SLD5YDR489W YHR022CP38763 256 aa1.76□□□□□ -2.13
SLD5YDR489W ICE2P40499 491 aa1.76□□□□□ -2.13
SLD5YDR489W YGR050CP53231 118 aa1.76□□□□□ -2.13
SLD5YDR489W CYT2Q00873 224 aa1.76□□□□□ -2.13
SLD5YDR489W PET191Q02772 108 aa1.76□□□□□ -2.13
SLD5YDR489W BOL1Q3E793 110 aa1.76□□□□□ -2.13
SLD5YDR489W CYR1P08678 2026 aaKnown RBP1.75□□□□□ -2.13
SLD5YDR489W PET9P18239 318 aaKnown RBP1.75□□□□□ -2.13
SLD5YDR489W ATG22P25568 528 aa1.75□□□□□ -2.13
SLD5YDR489W YKT6P36015 200 aaKnown RBP1.75□□□□□ -2.13
SLD5YDR489W BMT5P40493 336 aa1.75□□□□□ -2.13
SLD5YDR489W IRC18P47056 224 aa1.75□□□□□ -2.13
SLD5YDR489W AIF1P52923 378 aa1.75□□□□□ -2.13
SLD5YDR489W DOC1P53068 250 aa1.75□□□□□ -2.13
SLD5YDR489W PDR17P53844 350 aa1.75□□□□□ -2.13
SLD5YDR489W BNA7Q04066 261 aa1.75□□□□□ -2.13
SLD5YDR489W MCP1Q12106 302 aa1.75□□□□□ -2.13
SLD5YDR489W ADF1Q2V2Q1 113 aa1.75□□□□□ -2.13
SLD5YDR489W TUS1Q06412 1307 aa1.74□□□□□ -2.13
SLD5YDR489W CDC36P06100 191 aaPredicted RBP1.74□□□□□ -2.13
SLD5YDR489W CDC7P06243 507 aa1.74□□□□□ -2.13
SLD5YDR489W RFA3P26755 122 aaKnown RBP1.74□□□□□ -2.13
SLD5YDR489W IDH1P28834 360 aaKnown RBP RIP-Chip data1.74□□□□□ -2.13not detected
SLD5YDR489W IKI1P38874 309 aa1.74□□□□□ -2.13
SLD5YDR489W PGD1P40356 397 aa1.74□□□□□ -2.13
SLD5YDR489W RPL33BP41056 107 aaKnown RBP1.74□□□□□ -2.13
SLD5YDR489W BAT2P47176 376 aaKnown RBP1.74□□□□□ -2.13
SLD5YDR489W ERG25P53045 309 aa1.74□□□□□ -2.13
SLD5YDR489W BOL2P53082 120 aa1.74□□□□□ -2.13
SLD5YDR489W SWP1Q02795 286 aa1.74□□□□□ -2.13
SLD5YDR489W YNG1Q08465 219 aa1.74□□□□□ -2.13
SLD5YDR489W TDA8Q6B2U8 126 aa1.74□□□□□ -2.13
SLD5YDR489W YCL012CQ8J0M4 134 aa1.74□□□□□ -2.13
SLD5YDR489W YIL177CP40434 1758 aa1.74□□□□□ -2.13
SLD5YDR489W YJL225CP40889 1758 aa1.74□□□□□ -2.13
SLD5YDR489W GCN3P14741 305 aa1.73□□□□□ -2.13
SLD5YDR489W MRPL17P36528 281 aa1.73□□□□□ -2.13
SLD5YDR489W YCR087C-AP37263 153 aa1.73□□□□□ -2.13
SLD5YDR489W PEP8P40335 379 aa1.73□□□□□ -2.13
SLD5YDR489W YRB2P40517 327 aa1.73□□□□□ -2.13
SLD5YDR489W GAS3Q03655 524 aa1.73□□□□□ -2.13
SLD5YDR489W YDR249CQ03787 373 aa1.73□□□□□ -2.13
SLD5YDR489W GGA1Q06336 557 aa1.73□□□□□ -2.13
SLD5YDR489W RPL27BP0C2H7 136 aaKnown RBP1.72□□□□□ -2.13
SLD5YDR489W MGM101P32787 269 aaKnown RBP1.72□□□□□ -2.13
SLD5YDR489W DSE2P38844 325 aa1.72□□□□□ -2.13
SLD5YDR489W AVT2P39981 480 aa1.72□□□□□ -2.13
SLD5YDR489W YER135CP40082 130 aa1.72□□□□□ -2.13
SLD5YDR489W CUS2P53830 285 aaPredicted RBP1.72□□□□□ -2.13
SLD5YDR489W LSM7P53905 115 aaKnown RBP1.72□□□□□ -2.13
SLD5YDR489W MDH2P22133 377 aa1.71□□□□□ -2.14
SLD5YDR489W SPS18P32572 300 aa1.71□□□□□ -2.14
SLD5YDR489W MRPL28P36527 147 aa1.71□□□□□ -2.14
SLD5YDR489W UMP1P38293 148 aa1.71□□□□□ -2.14
SLD5YDR489W AGE2P40529 298 aa1.71□□□□□ -2.14
SLD5YDR489W TIR3P40552 269 aa1.71□□□□□ -2.14
SLD5YDR489W COG5P53951 403 aa1.71□□□□□ -2.14
SLD5YDR489W SNZ1Q03148 297 aa1.71□□□□□ -2.14
SLD5YDR489W MRPS17Q03246 237 aaPredicted RBP1.71□□□□□ -2.14
SLD5YDR489W CWC21Q03375 135 aaKnown RBP1.71□□□□□ -2.14
SLD5YDR489W TSC3Q3E790 80 aa1.71□□□□□ -2.14
SLD5YDR489W PDR18P53756 1333 aa1.7□□□□□ -2.14
SLD5YDR489W PTM1P32857 523 aa1.7□□□□□ -2.14
SLD5YDR489W YPL162CQ12042 273 aa1.7□□□□□ -2.14
SLD5YDR489W YHR214C-EQ8TGK0 99 aa1.7□□□□□ -2.14
SLD5YDR489W TIM9O74700 87 aa1.69□□□□□ -2.14
SLD5YDR489W HTB1P02293 131 aaKnown RBP1.69□□□□□ -2.14
SLD5YDR489W HTB2P02294 131 aa1.69□□□□□ -2.14
SLD5YDR489W MER1P16523 270 aa1.69□□□□□ -2.14
SLD5YDR489W MAG1P22134 296 aaKnown RBP1.69□□□□□ -2.14
SLD5YDR489W LSM4P40070 187 aaKnown RBP1.69□□□□□ -2.14
SLD5YDR489W SML1Q04964 104 aa1.69□□□□□ -2.14
SLD5YDR489W ABP140Q08641 628 aaKnown RBP1.69□□□□□ -2.14
SLD5YDR489W FSF1Q12029 327 aaKnown RBP1.69□□□□□ -2.14
SLD5YDR489W KSS1P14681 368 aa1.68□□□□□ -2.14
SLD5YDR489W RPB3P16370 318 aaKnown RBP1.68□□□□□ -2.14
SLD5YDR489W MRPS28P21771 286 aa1.68□□□□□ -2.14
SLD5YDR489W FZF1P32805 299 aa1.68□□□□□ -2.14
SLD5YDR489W RFC4P40339 323 aaKnown RBP1.68□□□□□ -2.14
SLD5YDR489W GVP36P40531 326 aaKnown RBP1.68□□□□□ -2.14
SLD5YDR489W ERG10P41338 398 aaKnown RBP1.68□□□□□ -2.14
SLD5YDR489W NOP19P53317 196 aaPredicted RBP1.68□□□□□ -2.14
SLD5YDR489W YNR077CP53758 84 aa1.68□□□□□ -2.14
SLD5YDR489W YMR226CQ05016 267 aaKnown RBP1.68□□□□□ -2.14
SLD5YDR489W GPM2Q12008 311 aa1.68□□□□□ -2.14
SLD5YDR489W QCR7P00128 127 aa1.67□□□□□ -2.14
SLD5YDR489W ATP15P21306 62 aa1.67□□□□□ -2.14
SLD5YDR489W AST2P39945 430 aaKnown RBP1.67□□□□□ -2.14
SLD5YDR489W RMD6P39975 231 aa1.67□□□□□ -2.14
SLD5YDR489W YNL217WP40152 326 aa1.67□□□□□ -2.14
SLD5YDR489W YFR054CP43622 192 aa1.67□□□□□ -2.14
SLD5YDR489W BUD25P85052 153 aa1.67□□□□□ -2.14
SLD5YDR489W GET4Q12125 312 aa1.67□□□□□ -2.14
SLD5YDR489W YFR032C-BQ8TGU2 87 aa1.67□□□□□ -2.14
SLD5YDR489W URA5P13298 226 aaKnown RBP1.66□□□□□ -2.14
Retrieved 100 of 5,963 RNA–protein pairs in 74.5 ms