RNA–Protein interactions for RNA: YDR227W

SIR4, Transcript of SIR protein involved in assembly of silent chromatin domains, yeastyeast

Gene SIR4, Length 4,077 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SIR4YDR227W TYR1P20049 452 aa1.72□□□□□ -2.13
SIR4YDR227W MRPS28P21771 286 aa1.72□□□□□ -2.13
SIR4YDR227W ACH1P32316 526 aa1.72□□□□□ -2.13
SIR4YDR227W VAM7P32912 316 aa1.72□□□□□ -2.13
SIR4YDR227W SLM6P38343 150 aa1.72□□□□□ -2.13
SIR4YDR227W BDH2P39713 417 aa1.72□□□□□ -2.13
SIR4YDR227W TMA22P47089 198 aaPredicted RBP1.72□□□□□ -2.13
SIR4YDR227W YGR015CP53208 328 aa1.72□□□□□ -2.13
SIR4YDR227W YML108WQ03759 105 aa1.72□□□□□ -2.13
SIR4YDR227W TRM12Q04235 462 aa1.72□□□□□ -2.13
SIR4YDR227W YET3Q07451 203 aa1.72□□□□□ -2.13
SIR4YDR227W YOL014WQ08110 124 aa1.72□□□□□ -2.13
SIR4YDR227W BAG7Q12128 409 aa1.72□□□□□ -2.13
SIR4YDR227W USB1Q12208 290 aaKnown RBP1.72□□□□□ -2.13
SIR4YDR227W ARP6Q12509 438 aa1.72□□□□□ -2.13
SIR4YDR227W YBR255C-AQ3E776 120 aa1.72□□□□□ -2.13
SIR4YDR227W BI3Q9ZZW7 517 aa1.72□□□□□ -2.13
SIR4YDR227W KTI12P34253 313 aaKnown RBP1.72□□□□□ -2.13
SIR4YDR227W YHR122WP38829 231 aa1.72□□□□□ -2.13
SIR4YDR227W SNM1P40993 198 aa1.72□□□□□ -2.13
SIR4YDR227W SNO2P53823 222 aa1.72□□□□□ -2.13
SIR4YDR227W IRC15Q02733 499 aa1.72□□□□□ -2.13
SIR4YDR227W GOT1Q03554 138 aa1.72□□□□□ -2.13
SIR4YDR227W YPD1Q07688 167 aa1.72□□□□□ -2.13
SIR4YDR227W YNG1Q08465 219 aa1.72□□□□□ -2.13
SIR4YDR227W YFR010W-AP0C5N0 62 aa1.72□□□□□ -2.13
SIR4YDR227W CLG1P35190 452 aa1.72□□□□□ -2.13
SIR4YDR227W YBR137WP38276 179 aa1.72□□□□□ -2.13
SIR4YDR227W YBR220CP38318 560 aa1.72□□□□□ -2.13
SIR4YDR227W SDH8P38345 138 aa1.72□□□□□ -2.13
SIR4YDR227W YIL086CP40503 102 aa1.72□□□□□ -2.13
SIR4YDR227W ABF2Q02486 183 aa1.72□□□□□ -2.13
SIR4YDR227W YDL242WQ07746 117 aa1.72□□□□□ -2.13
SIR4YDR227W Q0297Q9ZZV8 51 aa1.72□□□□□ -2.13
SIR4YDR227W CBP6P07253 162 aaPredicted RBP1.71□□□□□ -2.13
SIR4YDR227W GCN3P14741 305 aa1.71□□□□□ -2.13
SIR4YDR227W ILV6P25605 309 aaKnown RBP1.71□□□□□ -2.13
SIR4YDR227W YCR100CP25606 316 aa1.71□□□□□ -2.13
SIR4YDR227W ARC40P38328 384 aaKnown RBP1.71□□□□□ -2.13
SIR4YDR227W YHR035WP38769 630 aa1.71□□□□□ -2.13
SIR4YDR227W CTF8P38877 133 aa1.71□□□□□ -2.13
SIR4YDR227W MRPL49P40858 161 aaPredicted RBP1.71□□□□□ -2.13
SIR4YDR227W LCB3P47013 409 aa1.71□□□□□ -2.13
SIR4YDR227W VMA10P48836 114 aaKnown RBP1.71□□□□□ -2.13
SIR4YDR227W YIP1P53039 248 aa1.71□□□□□ -2.13
SIR4YDR227W RCF2P53721 224 aa1.71□□□□□ -2.13
SIR4YDR227W COS1P53822 381 aa1.71□□□□□ -2.13
SIR4YDR227W NRK1P53915 240 aa1.71□□□□□ -2.13
SIR4YDR227W YDC1Q02896 317 aa1.71□□□□□ -2.13
SIR4YDR227W FMN1Q03778 218 aa1.71□□□□□ -2.13
SIR4YDR227W YDR249CQ03787 373 aa1.71□□□□□ -2.13
SIR4YDR227W HNT1Q04344 158 aaKnown RBP1.71□□□□□ -2.13
SIR4YDR227W UPS1Q05776 175 aa1.71□□□□□ -2.13
SIR4YDR227W YLR224WQ05947 369 aa1.71□□□□□ -2.13
SIR4YDR227W RPL35AP0CX84 120 aaKnown RBP1.71□□□□□ -2.14
SIR4YDR227W RPL35BP0CX85 120 aaKnown RBP1.71□□□□□ -2.14
SIR4YDR227W ZIP1P31111 875 aa1.71□□□□□ -2.14
SIR4YDR227W SNC2P33328 115 aa1.71□□□□□ -2.14
SIR4YDR227W RTS2P40962 232 aa1.71□□□□□ -2.14
SIR4YDR227W AZF1P41696 914 aa1.71□□□□□ -2.14
SIR4YDR227W TTI2P47168 421 aa1.71□□□□□ -2.14
SIR4YDR227W AVT4P50944 713 aa1.71□□□□□ -2.14
SIR4YDR227W YGR017WP53210 297 aa1.71□□□□□ -2.14
SIR4YDR227W MRX8Q05473 314 aa1.71□□□□□ -2.14
SIR4YDR227W LIP2Q06005 328 aa1.71□□□□□ -2.14
SIR4YDR227W RNH203Q12338 110 aa1.71□□□□□ -2.14
SIR4YDR227W BBP1Q12365 385 aa1.71□□□□□ -2.14
SIR4YDR227W TRM13Q12383 476 aa1.71□□□□□ -2.14
SIR4YDR227W PBI2P0CT04 75 aaKnown RBP1.71□□□□□ -2.14
SIR4YDR227W YNL208WP40159 199 aaKnown RBP1.71□□□□□ -2.14
SIR4YDR227W OST2P46964 130 aa1.71□□□□□ -2.14
SIR4YDR227W YKE2P52553 114 aa1.71□□□□□ -2.14
SIR4YDR227W ACT1P60010 375 aaKnown RBP1.71□□□□□ -2.14
SIR4YDR227W PIR3Q03180 325 aa1.71□□□□□ -2.14
SIR4YDR227W SWF1Q04629 336 aa1.71□□□□□ -2.14
SIR4YDR227W FMP42Q04991 504 aa1.71□□□□□ -2.14
SIR4YDR227W RNH202Q05635 350 aa1.71□□□□□ -2.14
SIR4YDR227W LDB18Q07887 179 aa1.71□□□□□ -2.14
SIR4YDR227W THP3Q12049 470 aaKnown RBP1.71□□□□□ -2.14
SIR4YDR227W YPR011CQ12251 326 aa1.71□□□□□ -2.14
SIR4YDR227W DCN1Q12395 269 aa1.71□□□□□ -2.14
SIR4YDR227W YBL008W-AQ3E821 79 aa1.71□□□□□ -2.14
SIR4YDR227W STT4P37297 1900 aa1.71□□□□□ -2.14
SIR4YDR227W UBC5P15732 148 aa1.71□□□□□ -2.14
SIR4YDR227W MRPL17P36528 281 aa1.71□□□□□ -2.14
SIR4YDR227W YBR090CP38253 122 aa1.71□□□□□ -2.14
SIR4YDR227W MED8P38304 223 aa1.71□□□□□ -2.14
SIR4YDR227W CCT4P39078 528 aaKnown RBP1.71□□□□□ -2.14
SIR4YDR227W GAT4P40569 121 aa1.71□□□□□ -2.14
SIR4YDR227W UFD1P53044 361 aa1.71□□□□□ -2.14
SIR4YDR227W NCE103P53615 221 aa1.71□□□□□ -2.14
SIR4YDR227W ATG39Q06159 398 aa1.71□□□□□ -2.14
SIR4YDR227W SSC1P0CS90 654 aaKnown RBP1.7□□□□□ -2.14
SIR4YDR227W SIP2P34164 415 aaKnown RBP1.7□□□□□ -2.14
SIR4YDR227W RPS20P38701 121 aaKnown RBP1.7□□□□□ -2.14
SIR4YDR227W NVJ1P38881 321 aa1.7□□□□□ -2.14
SIR4YDR227W MST28P39552 234 aa1.7□□□□□ -2.14
SIR4YDR227W ARG2P40360 574 aa1.7□□□□□ -2.14
SIR4YDR227W YJL213WP40896 331 aa1.7□□□□□ -2.14
SIR4YDR227W ILM1P47155 203 aa1.7□□□□□ -2.14
Retrieved 100 of 5,963 RNA–protein pairs in 77.4 ms