RNA–Protein interactions for RNA: YDL212W

SHR3, Transcript of Endoplasmic reticulum packaging chaperone, yeastyeast

Gene SHR3, Length 633 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHR3YDL212W ARC19P33204 171 aaKnown RBP1.88□□□□□ -2.11
SHR3YDL212W PRP18P33411 251 aaPredicted RBP1.88□□□□□ -2.11
SHR3YDL212W ADO1P47143 340 aaKnown RBP1.88□□□□□ -2.11
SHR3YDL212W BXI1P48558 297 aa1.88□□□□□ -2.11
SHR3YDL212W SNZ1Q03148 297 aa1.88□□□□□ -2.11
SHR3YDL212W YML108WQ03759 105 aa1.88□□□□□ -2.11
SHR3YDL212W YDR248CQ03786 193 aa1.88□□□□□ -2.11
SHR3YDL212W YRA1Q12159 226 aaKnown RBP1.88□□□□□ -2.11
SHR3YDL212W NCB2Q92317 146 aa1.88□□□□□ -2.11
SHR3YDL212W JIP3O13555 125 aa1.87□□□□□ -2.11
SHR3YDL212W REP2P03872 296 aa1.87□□□□□ -2.11
SHR3YDL212W MATALPHA2P0CY08 210 aa1.87□□□□□ -2.11
SHR3YDL212W HMLALPHA2P0CY09 210 aa1.87□□□□□ -2.11
SHR3YDL212W CBF1P17106 351 aa1.87□□□□□ -2.11
SHR3YDL212W STE18P18852 110 aa1.87□□□□□ -2.11
SHR3YDL212W APS1P35181 156 aa1.87□□□□□ -2.11
SHR3YDL212W RFC4P40339 323 aaKnown RBP1.87□□□□□ -2.11
SHR3YDL212W FAR7P43592 221 aa1.87□□□□□ -2.11
SHR3YDL212W PRM8P53174 237 aa1.87□□□□□ -2.11
SHR3YDL212W SPG3Q04398 127 aaPredicted RBP1.87□□□□□ -2.11
SHR3YDL212W YMR226CQ05016 267 aaKnown RBP1.87□□□□□ -2.11
SHR3YDL212W SMD2Q06217 110 aaKnown RBP1.87□□□□□ -2.11
SHR3YDL212W JLP1Q12358 412 aa1.87□□□□□ -2.11
SHR3YDL212W KSS1P14681 368 aa1.86□□□□□ -2.11
SHR3YDL212W YPK2P18961 677 aa1.86□□□□□ -2.11
SHR3YDL212W APA2P22108 325 aa1.86□□□□□ -2.11
SHR3YDL212W TCA17P32613 152 aa1.86□□□□□ -2.11
SHR3YDL212W ERV15P38312 142 aa1.86□□□□□ -2.11
SHR3YDL212W PEP8P40335 379 aa1.86□□□□□ -2.11
SHR3YDL212W YKE4P40544 346 aa1.86□□□□□ -2.11
SHR3YDL212W CUS2P53830 285 aaPredicted RBP1.86□□□□□ -2.11
SHR3YDL212W RAD9P14737 1309 aa1.86□□□□□ -2.11
SHR3YDL212W RPL27AP0C2H6 136 aaKnown RBP1.85□□□□□ -2.11
SHR3YDL212W RPL27BP0C2H7 136 aaKnown RBP1.85□□□□□ -2.11
SHR3YDL212W ATG22P25568 528 aa1.85□□□□□ -2.11
SHR3YDL212W MEI4P29467 408 aa1.85□□□□□ -2.11
SHR3YDL212W TAF14P35189 244 aa1.85□□□□□ -2.11
SHR3YDL212W ECM4P36156 370 aa1.85□□□□□ -2.11
SHR3YDL212W POP4P38336 279 aa1.85□□□□□ -2.11
SHR3YDL212W YNR062CP53748 327 aa1.85□□□□□ -2.11
SHR3YDL212W CYT2Q00873 224 aa1.85□□□□□ -2.11
SHR3YDL212W USB1Q12208 290 aaKnown RBP1.85□□□□□ -2.11
SHR3YDL212W TDA8Q6B2U8 126 aa1.85□□□□□ -2.11
SHR3YDL212W SEC4P07560 215 aaKnown RBP1.84□□□□□ -2.11
SHR3YDL212W YLR156WP0CE96 114 aa1.84□□□□□ -2.11
SHR3YDL212W YLR159WP0CE97 114 aa1.84□□□□□ -2.11
SHR3YDL212W YLR161WP0CE98 114 aa1.84□□□□□ -2.11
SHR3YDL212W DDI2P0CH63 225 aa1.84□□□□□ -2.11
SHR3YDL212W DDI3P0CH64 225 aa1.84□□□□□ -2.11
SHR3YDL212W YHR022CP38763 256 aa1.84□□□□□ -2.11
SHR3YDL212W BMT5P40493 336 aa1.84□□□□□ -2.11
SHR3YDL212W AIF1P52923 378 aa1.84□□□□□ -2.11
SHR3YDL212W HOP2P53187 214 aa1.84□□□□□ -2.11
SHR3YDL212W GAS3Q03655 524 aa1.84□□□□□ -2.11
SHR3YDL212W PET9P18239 318 aaKnown RBP1.83□□□□□ -2.12
SHR3YDL212W IDH1P28834 360 aaKnown RBP RIP-Chip data1.83□□□□□ -2.12not detected
SHR3YDL212W SEC17P32602 292 aa1.83□□□□□ -2.12
SHR3YDL212W PGD1P40356 397 aa1.83□□□□□ -2.12
SHR3YDL212W RPL33BP41056 107 aaKnown RBP1.83□□□□□ -2.12
SHR3YDL212W ERG25P53045 309 aa1.83□□□□□ -2.12
SHR3YDL212W PDR17P53844 350 aa1.83□□□□□ -2.12
SHR3YDL212W IKI3Q06706 1349 aaKnown RBP1.83□□□□□ -2.12
SHR3YDL212W HTB1P02293 131 aaKnown RBP1.82□□□□□ -2.12
SHR3YDL212W HTB2P02294 131 aa1.82□□□□□ -2.12
SHR3YDL212W UTP30P36144 274 aaKnown RBP1.82□□□□□ -2.12
SHR3YDL212W ICE2P40499 491 aa1.82□□□□□ -2.12
SHR3YDL212W IRC18P47056 224 aa1.82□□□□□ -2.12
SHR3YDL212W EFM5P53200 248 aaKnown RBP1.82□□□□□ -2.12
SHR3YDL212W PET191Q02772 108 aa1.82□□□□□ -2.12
SHR3YDL212W CMC2Q3E7A4 109 aa1.82□□□□□ -2.12
SHR3YDL212W TUS1Q06412 1307 aa1.82□□□□□ -2.12
SHR3YDL212W GCN3P14741 305 aa1.81□□□□□ -2.12
SHR3YDL212W RFA3P26755 122 aaKnown RBP1.81□□□□□ -2.12
SHR3YDL212W ATP7P30902 174 aa1.81□□□□□ -2.12
SHR3YDL212W SPS18P32572 300 aa1.81□□□□□ -2.12
SHR3YDL212W SVP26P38869 228 aa1.81□□□□□ -2.12
SHR3YDL212W SEC72P39742 193 aaKnown RBP1.81□□□□□ -2.12
SHR3YDL212W YER135CP40082 130 aa1.81□□□□□ -2.12
SHR3YDL212W BOL2P53082 120 aa1.81□□□□□ -2.12
SHR3YDL212W YGR050CP53231 118 aa1.81□□□□□ -2.12
SHR3YDL212W NOP19P53317 196 aaPredicted RBP1.81□□□□□ -2.12
SHR3YDL212W GIM5Q04493 163 aa1.81□□□□□ -2.12
SHR3YDL212W ABP140Q08641 628 aaKnown RBP1.81□□□□□ -2.12
SHR3YDL212W GPM2Q12008 311 aa1.81□□□□□ -2.12
SHR3YDL212W MCP1Q12106 302 aa1.81□□□□□ -2.12
SHR3YDL212W YHR214C-EQ8TGK0 99 aa1.81□□□□□ -2.12
SHR3YDL212W MRPL28P36527 147 aa1.8□□□□□ -2.12
SHR3YDL212W DSE2P38844 325 aa1.8□□□□□ -2.12
SHR3YDL212W IKI1P38874 309 aa1.8□□□□□ -2.12
SHR3YDL212W AGE2P40529 298 aa1.8□□□□□ -2.12
SHR3YDL212W DOC1P53068 250 aa1.8□□□□□ -2.12
SHR3YDL212W GET1P53192 235 aa1.8□□□□□ -2.12
SHR3YDL212W SWP1Q02795 286 aa1.8□□□□□ -2.12
SHR3YDL212W FUS2Q05670 677 aa1.8□□□□□ -2.12
SHR3YDL212W QCR7P00128 127 aa1.79□□□□□ -2.12
SHR3YDL212W MDH2P22133 377 aa1.79□□□□□ -2.12
SHR3YDL212W ADE1P27616 306 aa1.79□□□□□ -2.12
SHR3YDL212W PTM1P32857 523 aa1.79□□□□□ -2.12
SHR3YDL212W MRPL17P36528 281 aa1.79□□□□□ -2.12
SHR3YDL212W YCR087C-AP37263 153 aa1.79□□□□□ -2.12
Retrieved 100 of 5,963 RNA–protein pairs in 35.1 ms