RNA–Protein interactions for RNA: YDL165W

CDC36, Transcript of Component of the CCR4-NOT core complex, yeastyeast

Gene CDC36, Length 576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC36YDL165W RCE1Q03530 315 aa1.16□□□□□ -2.22
CDC36YDL165W CAB5Q03941 241 aa1.16□□□□□ -2.22
CDC36YDL165W RAV2Q03956 351 aa1.16□□□□□ -2.22
CDC36YDL165W HSP31Q04432 237 aa1.16□□□□□ -2.22
CDC36YDL165W LIP2Q06005 328 aa1.16□□□□□ -2.22
CDC36YDL165W YLR446WQ06204 433 aa1.16□□□□□ -2.22
CDC36YDL165W MCH1Q07376 486 aa1.16□□□□□ -2.22
CDC36YDL165W GRE1Q08969 168 aa1.16□□□□□ -2.22
CDC36YDL165W MMT2Q08970 484 aa1.16□□□□□ -2.22
CDC36YDL165W SAM4Q08985 325 aaKnown RBP1.16□□□□□ -2.22
CDC36YDL165W USB1Q12208 290 aaKnown RBP1.16□□□□□ -2.22
CDC36YDL165W ATG5Q12380 294 aa1.16□□□□□ -2.22
CDC36YDL165W KTI11Q3E840 82 aa1.16□□□□□ -2.22
CDC36YDL165W YCL012CQ8J0M4 134 aa1.16□□□□□ -2.22
CDC36YDL165W IZH4Q99393 312 aa1.16□□□□□ -2.22
CDC36YDL165W MYO2P19524 1574 aaKnown RBP1.16□□□□□ -2.22
CDC36YDL165W PDR5P33302 1511 aaKnown RBP1.15□□□□□ -2.22
CDC36YDL165W YCF1P39109 1515 aaKnown RBP1.15□□□□□ -2.22
CDC36YDL165W HIR3P47171 1648 aa1.15□□□□□ -2.22
CDC36YDL165W YLR462WO13556 202 aa1.15□□□□□ -2.23
CDC36YDL165W ADE4P04046 510 aaKnown RBP1.15□□□□□ -2.23
CDC36YDL165W RHO1P06780 209 aaKnown RBP1.15□□□□□ -2.23
CDC36YDL165W CDC21P06785 304 aa1.15□□□□□ -2.23
CDC36YDL165W RPS19AP07280 144 aaKnown RBP1.15□□□□□ -2.23
CDC36YDL165W RPS19BP07281 144 aaPredicted RBP1.15□□□□□ -2.23
CDC36YDL165W RPS16AP0CX51 143 aaKnown RBP1.15□□□□□ -2.23
CDC36YDL165W RPS16BP0CX52 143 aaKnown RBP1.15□□□□□ -2.23
CDC36YDL165W TIR1P10863 254 aa1.15□□□□□ -2.23
CDC36YDL165W INO4P13902 151 aa1.15□□□□□ -2.23
CDC36YDL165W CUP2P15315 225 aa1.15□□□□□ -2.23
CDC36YDL165W RPB3P16370 318 aaKnown RBP1.15□□□□□ -2.23
CDC36YDL165W FCY2P17064 533 aa1.15□□□□□ -2.23
CDC36YDL165W PHO85P17157 305 aa1.15□□□□□ -2.23
CDC36YDL165W YMR31P19955 123 aa1.15□□□□□ -2.23
CDC36YDL165W PHO80P20052 293 aa1.15□□□□□ -2.23
CDC36YDL165W EPT1P22140 391 aa1.15□□□□□ -2.23
CDC36YDL165W SCO1P23833 295 aa1.15□□□□□ -2.23
CDC36YDL165W ATG15P25641 520 aa1.15□□□□□ -2.23
CDC36YDL165W RFA3P26755 122 aaKnown RBP1.15□□□□□ -2.23
CDC36YDL165W ACB1P31787 87 aa1.15□□□□□ -2.23
CDC36YDL165W MUD1P32605 298 aaKnown RBP1.15□□□□□ -2.23
CDC36YDL165W CLB6P32943 380 aa1.15□□□□□ -2.23
CDC36YDL165W SNC2P33328 115 aa1.15□□□□□ -2.23
CDC36YDL165W SRY1P36007 326 aa1.15□□□□□ -2.23
CDC36YDL165W MRPL11P36521 249 aaPredicted RBP1.15□□□□□ -2.23
CDC36YDL165W YBR090CP38253 122 aa1.15□□□□□ -2.23
CDC36YDL165W RPS20P38701 121 aaKnown RBP1.15□□□□□ -2.23
CDC36YDL165W ARN2P38724 620 aa1.15□□□□□ -2.23
CDC36YDL165W RPL14BP38754 138 aaKnown RBP1.15□□□□□ -2.23
CDC36YDL165W DOG1P38774 246 aa1.15□□□□□ -2.23
CDC36YDL165W YPT35P38815 214 aaKnown RBP1.15□□□□□ -2.23
CDC36YDL165W IPT1P38954 527 aa1.15□□□□□ -2.23
CDC36YDL165W IRC22P40006 225 aa1.15□□□□□ -2.23
CDC36YDL165W ISC1P40015 477 aaKnown RBP1.15□□□□□ -2.23
CDC36YDL165W BTT1P40314 149 aaPredicted RBP1.15□□□□□ -2.23
CDC36YDL165W COA1P40452 197 aa1.15□□□□□ -2.23
CDC36YDL165W BMT5P40493 336 aa1.15□□□□□ -2.23
CDC36YDL165W LYS12P40495 371 aaKnown RBP1.15□□□□□ -2.23
CDC36YDL165W YPS6P40583 537 aa1.15□□□□□ -2.23
CDC36YDL165W YCH1P42937 148 aa1.15□□□□□ -2.23
CDC36YDL165W YFL064CP43540 174 aa1.15□□□□□ -2.23
CDC36YDL165W MOB2P43563 287 aa1.15□□□□□ -2.23
CDC36YDL165W WWM1P43582 211 aaKnown RBP1.15□□□□□ -2.23
CDC36YDL165W ERJ5P43613 295 aaPredicted RBP1.15□□□□□ -2.23
CDC36YDL165W YFR057WP43625 151 aa1.15□□□□□ -2.23
CDC36YDL165W CIN2P46670 268 aa1.15□□□□□ -2.23
CDC36YDL165W YJR015WP47090 510 aa1.15□□□□□ -2.23
CDC36YDL165W STE24P47154 453 aa1.15□□□□□ -2.23
CDC36YDL165W MIC26P50087 233 aa1.15□□□□□ -2.23
CDC36YDL165W MGA1P53050 456 aa1.15□□□□□ -2.23
CDC36YDL165W CDH1P53197 566 aa1.15□□□□□ -2.23
CDC36YDL165W CLD1P53264 445 aa1.15□□□□□ -2.23
CDC36YDL165W TIM13P53299 105 aa1.15□□□□□ -2.23
CDC36YDL165W MTM1P53320 366 aa1.15□□□□□ -2.23
CDC36YDL165W RHO5P53879 331 aaKnown RBP1.15□□□□□ -2.23
CDC36YDL165W FMP41P53889 259 aaKnown RBP1.15□□□□□ -2.23
CDC36YDL165W IBD2P53892 351 aa1.15□□□□□ -2.23
CDC36YDL165W LSM7P53905 115 aaKnown RBP1.15□□□□□ -2.23
CDC36YDL165W DAD3P69850 94 aa1.15□□□□□ -2.23
CDC36YDL165W AIM11P87275 137 aa1.15□□□□□ -2.23
CDC36YDL165W MRPS16Q02608 121 aa1.15□□□□□ -2.23
CDC36YDL165W RSM10Q03201 203 aa1.15□□□□□ -2.23
CDC36YDL165W YML018CQ03730 393 aa1.15□□□□□ -2.23
CDC36YDL165W UPS3Q04006 179 aa1.15□□□□□ -2.23
CDC36YDL165W SEC13Q04491 297 aaKnown RBP1.15□□□□□ -2.23
CDC36YDL165W YMR315WQ04869 349 aaKnown RBP1.15□□□□□ -2.23
CDC36YDL165W RNH202Q05635 350 aa1.15□□□□□ -2.23
CDC36YDL165W TAZ1Q06510 381 aa1.15□□□□□ -2.23
CDC36YDL165W SWC7Q06707 132 aa1.15□□□□□ -2.23
CDC36YDL165W ASA1Q06822 443 aa1.15□□□□□ -2.23
CDC36YDL165W PEX27Q08580 376 aa1.15□□□□□ -2.23
CDC36YDL165W RAD28Q12021 506 aa1.15□□□□□ -2.23
CDC36YDL165W MCP1Q12106 302 aa1.15□□□□□ -2.23
CDC36YDL165W YPL245WQ12179 454 aaKnown RBP1.15□□□□□ -2.23
CDC36YDL165W FRE8Q12209 686 aa1.15□□□□□ -2.23
CDC36YDL165W YOR029WQ12243 111 aa1.15□□□□□ -2.23
CDC36YDL165W YLR126CQ12288 251 aa1.15□□□□□ -2.23
CDC36YDL165W PST1Q12355 444 aa1.15□□□□□ -2.23
CDC36YDL165W AIM45Q12480 344 aaKnown RBP1.15□□□□□ -2.23
CDC36YDL165W YDL007C-AQ2V2Q0 85 aa1.15□□□□□ -2.23
Retrieved 100 of 5,963 RNA–protein pairs in 52.5 ms