RNA–Protein interactions for RNA: YDL006W

PTC1, Transcript of Type 2C protein phosphatase (PP2C), yeastyeast

Gene PTC1, Length 846 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PTC1YDL006W YOR343CQ12484 108 aa3.71□□□□□ -1.82
PTC1YDL006W YEL009C-AA0A023PZF2 135 aa3.7□□□□□ -1.82
PTC1YDL006W MSW1P04803 379 aa3.7□□□□□ -1.82
PTC1YDL006W SCO1P23833 295 aa3.7□□□□□ -1.82
PTC1YDL006W AHC2P25649 128 aa3.7□□□□□ -1.82
PTC1YDL006W ZUO1P32527 433 aaKnown RBP3.7□□□□□ -1.82
PTC1YDL006W YAE1P47118 141 aaPredicted RBP3.7□□□□□ -1.82
PTC1YDL006W SUR7P54003 302 aa3.7□□□□□ -1.82
PTC1YDL006W TSA2Q04120 196 aa3.7□□□□□ -1.82
PTC1YDL006W MSC3Q05812 728 aa3.7□□□□□ -1.82
PTC1YDL006W LIP2Q06005 328 aa3.7□□□□□ -1.82
PTC1YDL006W GPN3Q06543 272 aa3.7□□□□□ -1.82
PTC1YDL006W MSH5Q12175 901 aa3.7□□□□□ -1.82
PTC1YDL006W YPR1Q12458 312 aa3.7□□□□□ -1.82
PTC1YDL006W DCP1Q12517 231 aaPredicted RBP3.7□□□□□ -1.82
PTC1YDL006W Q0144Q9ZZW2 109 aa3.7□□□□□ -1.82
PTC1YDL006W IRA2P19158 3079 aa3.69□□□□□ -1.82
PTC1YDL006W CTA1P15202 515 aa3.69□□□□□ -1.82
PTC1YDL006W ZRC1P20107 442 aa3.69□□□□□ -1.82
PTC1YDL006W UTR1P21373 530 aa3.69□□□□□ -1.82
PTC1YDL006W HXT2P23585 541 aa3.69□□□□□ -1.82
PTC1YDL006W LDS1P31379 325 aa3.69□□□□□ -1.82
PTC1YDL006W MRPS5P33759 307 aa3.69□□□□□ -1.82
PTC1YDL006W COS9P36034 407 aa3.69□□□□□ -1.82
PTC1YDL006W SRP102P36057 244 aaPredicted RBP3.69□□□□□ -1.82
PTC1YDL006W SHE2P36068 246 aaKnown RBP RIP-Chip data3.69□□□□□ -1.82not detected
PTC1YDL006W PEX32P38292 413 aa3.69□□□□□ -1.82
PTC1YDL006W PHB1P40961 287 aa3.69□□□□□ -1.82
PTC1YDL006W MNN5P46982 586 aa3.69□□□□□ -1.82
PTC1YDL006W SAY1P53324 424 aa3.69□□□□□ -1.82
PTC1YDL006W PAU12P53343 120 aa3.69□□□□□ -1.82
PTC1YDL006W RVB1Q03940 463 aaKnown RBP3.69□□□□□ -1.82
PTC1YDL006W BNA7Q04066 261 aa3.69□□□□□ -1.82
PTC1YDL006W NNT1Q05874 261 aa3.69□□□□□ -1.82
PTC1YDL006W MIM1Q08176 113 aa3.69□□□□□ -1.82
PTC1YDL006W SYC1Q08553 188 aaPredicted RBP3.69□□□□□ -1.82
PTC1YDL006W NIP7Q08962 181 aaKnown RBP3.69□□□□□ -1.82
PTC1YDL006W YLR099W-AQ3E798 87 aa3.69□□□□□ -1.82
PTC1YDL006W UBA3Q99344 299 aa3.69□□□□□ -1.82
PTC1YDL006W SIR2P06700 562 aa3.68□□□□□ -1.82
PTC1YDL006W PRB1P09232 635 aa3.68□□□□□ -1.82
PTC1YDL006W MDH2P22133 377 aa3.68□□□□□ -1.82
PTC1YDL006W PRE7P23724 241 aaKnown RBP3.68□□□□□ -1.82
PTC1YDL006W CAM1P29547 415 aaKnown RBP3.68□□□□□ -1.82
PTC1YDL006W DOA4P32571 926 aa3.68□□□□□ -1.82
PTC1YDL006W PAU24P38155 120 aa3.68□□□□□ -1.82
PTC1YDL006W RFC4P40339 323 aaKnown RBP3.68□□□□□ -1.82
PTC1YDL006W GDS1P41913 522 aa3.68□□□□□ -1.82
PTC1YDL006W CCC1P47818 322 aa3.68□□□□□ -1.82
PTC1YDL006W MKC7P53379 596 aa3.68□□□□□ -1.82
PTC1YDL006W HAL1Q01766 294 aa3.68□□□□□ -1.82
PTC1YDL006W ADD37Q03233 198 aa3.68□□□□□ -1.82
PTC1YDL006W MRX8Q05473 314 aa3.68□□□□□ -1.82
PTC1YDL006W CTS2Q06350 511 aa3.68□□□□□ -1.82
PTC1YDL006W RTC5Q12108 567 aaKnown RBP3.68□□□□□ -1.82
PTC1YDL006W MCT1Q12283 360 aa3.68□□□□□ -1.82
PTC1YDL006W SUS1Q6WNK7 96 aa3.68□□□□□ -1.82
PTC1YDL006W CBP6P07253 162 aaPredicted RBP3.67□□□□□ -1.82
PTC1YDL006W COX9P07255 59 aa3.67□□□□□ -1.82
PTC1YDL006W RPL23AP0CX41 137 aaKnown RBP3.67□□□□□ -1.82
PTC1YDL006W RPL23BP0CX42 137 aaKnown RBP3.67□□□□□ -1.82
PTC1YDL006W MRP1P10662 321 aaKnown RBP3.67□□□□□ -1.82
PTC1YDL006W STE18P18852 110 aa3.67□□□□□ -1.82
PTC1YDL006W MEK1P24719 497 aaPredicted RBP3.67□□□□□ -1.82
PTC1YDL006W PPA2P28239 310 aa3.67□□□□□ -1.82
PTC1YDL006W ERG9P29704 444 aa3.67□□□□□ -1.82
PTC1YDL006W YJL218WP40892 196 aaKnown RBP3.67□□□□□ -1.82
PTC1YDL006W YGL114WP53134 725 aa3.67□□□□□ -1.82
PTC1YDL006W VHT1P53241 593 aa3.67□□□□□ -1.82
PTC1YDL006W YDR102CQ03864 110 aa3.67□□□□□ -1.82
PTC1YDL006W YMR252CQ04814 134 aa3.67□□□□□ -1.82
PTC1YDL006W GRE1Q08969 168 aa3.67□□□□□ -1.82
PTC1YDL006W YHR214C-EQ8TGK0 99 aa3.67□□□□□ -1.82
PTC1YDL006W QCR7P00128 127 aa3.66□□□□□ -1.82
PTC1YDL006W MIR1P23641 311 aaKnown RBP3.66□□□□□ -1.82
PTC1YDL006W PAU2P32612 120 aa3.66□□□□□ -1.82
PTC1YDL006W TMA19P35691 167 aaKnown RBP3.66□□□□□ -1.82
PTC1YDL006W FCY21P40039 528 aa3.66□□□□□ -1.82
PTC1YDL006W TIR3P40552 269 aa3.66□□□□□ -1.82
PTC1YDL006W SER2P42941 309 aa3.66□□□□□ -1.82
PTC1YDL006W PAM16P42949 149 aa3.66□□□□□ -1.82
PTC1YDL006W ADO1P47143 340 aaKnown RBP3.66□□□□□ -1.82
PTC1YDL006W CWC23P52868 283 aaPredicted RBP3.66□□□□□ -1.82
PTC1YDL006W RPN14P53196 417 aa3.66□□□□□ -1.82
PTC1YDL006W ASI3P53983 676 aa3.66□□□□□ -1.82
PTC1YDL006W PET191Q02772 108 aa3.66□□□□□ -1.82
PTC1YDL006W DIG2Q03373 323 aaKnown RBP3.66□□□□□ -1.82
PTC1YDL006W AIM36Q03798 255 aa3.66□□□□□ -1.82
PTC1YDL006W GPI17Q04080 534 aa3.66□□□□□ -1.82
PTC1YDL006W FSH2Q05015 223 aa3.66□□□□□ -1.82
PTC1YDL006W GAS2Q06135 555 aa3.66□□□□□ -1.82
PTC1YDL006W TIR4Q12218 487 aaPredicted RBP3.66□□□□□ -1.82
PTC1YDL006W FLO9P39712 1322 aa3.66□□□□□ -1.82
PTC1YDL006W YLL053CP0CD98 152 aa3.65□□□□□ -1.83
PTC1YDL006W DBF2P22204 572 aa3.65□□□□□ -1.83
PTC1YDL006W PCL1P24867 279 aa3.65□□□□□ -1.83
PTC1YDL006W HOM6P31116 359 aaKnown RBP3.65□□□□□ -1.83
PTC1YDL006W SFK1P35735 353 aa3.65□□□□□ -1.83
PTC1YDL006W RCN1P36054 211 aa3.65□□□□□ -1.83
PTC1YDL006W MRPL39P36533 70 aa3.65□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 21.6 ms