RNA–Protein interactions for RNA: YBR258C

SHG1, Transcript of Subunit of the COMPASS (Set1C) complex, yeastyeast

Gene SHG1, Length 429 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHG1YBR258C OST6Q03723 332 aa2.07□□□□□ -2.08
SHG1YBR258C YMR166CQ03829 368 aa2.07□□□□□ -2.08
SHG1YBR258C MIX14Q04341 121 aa2.07□□□□□ -2.08
SHG1YBR258C CTS2Q06350 511 aa2.07□□□□□ -2.08
SHG1YBR258C YOR268CQ08734 132 aa2.07□□□□□ -2.08
SHG1YBR258C YPL247CQ12523 523 aa2.07□□□□□ -2.08
SHG1YBR258C YGR035W-AQ45U48 73 aa2.07□□□□□ -2.08
SHG1YBR258C YEL009C-AA0A023PZF2 135 aa2.06□□□□□ -2.08
SHG1YBR258C STP22P25604 385 aa2.06□□□□□ -2.08
SHG1YBR258C UTR5P32630 166 aa2.06□□□□□ -2.08
SHG1YBR258C RPT5P33297 434 aaKnown RBP2.06□□□□□ -2.08
SHG1YBR258C GDH2P33327 1092 aaKnown RBP2.06□□□□□ -2.08
SHG1YBR258C YKR032WP36127 104 aa2.06□□□□□ -2.08
SHG1YBR258C TEM1P38987 245 aa2.06□□□□□ -2.08
SHG1YBR258C YJR012CP47087 207 aa2.06□□□□□ -2.08
SHG1YBR258C YJR141WP47172 347 aaPredicted RBP2.06□□□□□ -2.08
SHG1YBR258C RAD17P48581 401 aa2.06□□□□□ -2.08
SHG1YBR258C YLR036CQ07986 203 aa2.06□□□□□ -2.08
SHG1YBR258C RPL26AP05743 127 aaKnown RBP2.05□□□□□ -2.08
SHG1YBR258C DPM1P14020 267 aaKnown RBP2.05□□□□□ -2.08
SHG1YBR258C EHD3P28817 500 aa2.05□□□□□ -2.08
SHG1YBR258C YRA2P36036 203 aaKnown RBP RIP-Chip data2.05□□□□□ -2.08not detected
SHG1YBR258C HEK2P38199 381 aaKnown RBP RIP-Chip data2.05□□□□□ -2.08 RIP-Chip
SHG1YBR258C ICE2P40499 491 aa2.05□□□□□ -2.08
SHG1YBR258C YJL028WP47062 111 aa2.05□□□□□ -2.08
SHG1YBR258C RPL26BP53221 127 aaKnown RBP2.05□□□□□ -2.08
SHG1YBR258C LAP3Q01532 483 aaKnown RBP RIP-Chip data2.05□□□□□ -2.08not detected
SHG1YBR258C YOL019WQ08157 551 aa2.05□□□□□ -2.08
SHG1YBR258C UIP4Q08926 304 aa2.05□□□□□ -2.08
SHG1YBR258C YPL150WQ12152 901 aa2.05□□□□□ -2.08
SHG1YBR258C RTR2Q12378 196 aa2.05□□□□□ -2.08
SHG1YBR258C RSR1P13856 272 aa2.04□□□□□ -2.08
SHG1YBR258C DPB2P24482 689 aaPredicted RBP2.04□□□□□ -2.08
SHG1YBR258C PRS4P38063 326 aaPredicted RBP2.04□□□□□ -2.08
SHG1YBR258C SMB1P40018 196 aaKnown RBP2.04□□□□□ -2.08
SHG1YBR258C PIR5P46999 287 aa2.04□□□□□ -2.08
SHG1YBR258C YJL118WP47022 219 aa2.04□□□□□ -2.08
SHG1YBR258C HOC1P47124 396 aa2.04□□□□□ -2.08
SHG1YBR258C HOP2P53187 214 aa2.04□□□□□ -2.08
SHG1YBR258C LDB18Q07887 179 aa2.04□□□□□ -2.08
SHG1YBR258C RRT8Q08219 342 aa2.04□□□□□ -2.08
SHG1YBR258C CSM4Q08955 156 aa2.04□□□□□ -2.08
SHG1YBR258C HOM6P31116 359 aaKnown RBP2.03□□□□□ -2.08
SHG1YBR258C QRI5P32344 111 aa2.03□□□□□ -2.08
SHG1YBR258C CLB6P32943 380 aa2.03□□□□□ -2.08
SHG1YBR258C THO1P40040 218 aaKnown RBP2.03□□□□□ -2.08
SHG1YBR258C COG3P40094 801 aa2.03□□□□□ -2.08
SHG1YBR258C RPL10P41805 221 aaKnown RBP2.03□□□□□ -2.08
SHG1YBR258C NIF3P53081 288 aa2.03□□□□□ -2.08
SHG1YBR258C CAB4P53332 305 aa2.03□□□□□ -2.08
SHG1YBR258C EBS1Q03466 884 aaKnown RBP2.03□□□□□ -2.08
SHG1YBR258C PEX10Q05568 337 aa2.03□□□□□ -2.08
SHG1YBR258C SDO1Q07953 250 aaKnown RBP2.03□□□□□ -2.08
SHG1YBR258C SGA1P08019 549 aa2.02□□□□□ -2.09
SHG1YBR258C TAH1P25638 111 aaPredicted RBP2.02□□□□□ -2.09
SHG1YBR258C VMA11P32842 164 aa2.02□□□□□ -2.09
SHG1YBR258C YUH1P35127 236 aa2.02□□□□□ -2.09
SHG1YBR258C SNZ3P43545 298 aa2.02□□□□□ -2.09
SHG1YBR258C MDM34P53083 459 aa2.02□□□□□ -2.09
SHG1YBR258C SSU72P53538 206 aaPredicted RBP2.02□□□□□ -2.09
SHG1YBR258C SNZ2P53824 298 aa2.02□□□□□ -2.09
SHG1YBR258C PRM15Q03262 622 aa2.02□□□□□ -2.09
SHG1YBR258C MIX17Q03667 156 aa2.02□□□□□ -2.09
SHG1YBR258C YMR114CQ04471 368 aaKnown RBP2.02□□□□□ -2.09
SHG1YBR258C ATG17Q06410 417 aa2.02□□□□□ -2.09
SHG1YBR258C YPR174CQ06616 221 aaPredicted RBP2.02□□□□□ -2.09
SHG1YBR258C YPR202WQ08993 238 aa2.02□□□□□ -2.09
SHG1YBR258C EFG1Q3E705 233 aaKnown RBP2.02□□□□□ -2.09
SHG1YBR258C YPL119C-AQ3E751 87 aa2.02□□□□□ -2.09
SHG1YBR258C SEY1Q99287 776 aa2.02□□□□□ -2.09
SHG1YBR258C RAD10P06838 210 aa2.01□□□□□ -2.09
SHG1YBR258C MRP1P10662 321 aaKnown RBP2.01□□□□□ -2.09
SHG1YBR258C RNA15P25299 296 aaPredicted RBP2.01□□□□□ -2.09
SHG1YBR258C RNP1P32385 249 aa2.01□□□□□ -2.09
SHG1YBR258C BIG1P38813 335 aa2.01□□□□□ -2.09
SHG1YBR258C AYR1P40471 297 aa2.01□□□□□ -2.09
SHG1YBR258C YJL016WP47072 561 aa2.01□□□□□ -2.09
SHG1YBR258C SBH2P52871 88 aa2.01□□□□□ -2.09
SHG1YBR258C MRH4P53166 561 aa2.01□□□□□ -2.09
SHG1YBR258C ASI3P53983 676 aa2.01□□□□□ -2.09
SHG1YBR258C BOP2Q06150 570 aa2.01□□□□□ -2.09
SHG1YBR258C YLR173WQ06247 608 aa2.01□□□□□ -2.09
SHG1YBR258C COQ10Q08058 207 aa2.01□□□□□ -2.09
SHG1YBR258C YBR096WP38256 230 aa2□□□□□ -2.09
SHG1YBR258C YBR220CP38318 560 aa2□□□□□ -2.09
SHG1YBR258C MRPL49P40858 161 aaPredicted RBP2□□□□□ -2.09
SHG1YBR258C YJR146WP47174 117 aa2□□□□□ -2.09
SHG1YBR258C YGL034CP53186 121 aa2□□□□□ -2.09
SHG1YBR258C SRL4Q03085 281 aa2□□□□□ -2.09
SHG1YBR258C CSI2Q08054 341 aa2□□□□□ -2.09
SHG1YBR258C YJL197C-AP0C5P0 93 aa1.99□□□□□ -2.09
SHG1YBR258C ADE1P27616 306 aa1.99□□□□□ -2.09
SHG1YBR258C JEN1P36035 616 aa1.99□□□□□ -2.09
SHG1YBR258C LDB7P38210 180 aa1.99□□□□□ -2.09
SHG1YBR258C GOS1P38736 223 aa1.99□□□□□ -2.09
SHG1YBR258C YHR127WP38833 243 aaKnown RBP1.99□□□□□ -2.09
SHG1YBR258C PEX12Q04370 399 aa1.99□□□□□ -2.09
SHG1YBR258C YDR124WQ04608 324 aa1.99□□□□□ -2.09
SHG1YBR258C RAF1Q06891 181 aa1.99□□□□□ -2.09
SHG1YBR258C SYC1Q08553 188 aaPredicted RBP1.99□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 24.3 ms