RNA–Protein interactions for RNA: YBR106W

PHO88, Transcript of Probable membrane protein, yeastyeast

Gene PHO88, Length 567 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PHO88YBR106W ADH1P00330 348 aaKnown RBP2.71□□□□□ -1.98
PHO88YBR106W SPT3P06844 337 aa2.71□□□□□ -1.98
PHO88YBR106W ZWF1P11412 505 aaKnown RBP2.71□□□□□ -1.98
PHO88YBR106W GCY1P14065 312 aaKnown RBP RIP-Chip data2.71□□□□□ -1.98not detected
PHO88YBR106W CLG1P35190 452 aa2.71□□□□□ -1.98
PHO88YBR106W YKL075CP36083 450 aa2.71□□□□□ -1.98
PHO88YBR106W UTH1P36135 365 aa2.71□□□□□ -1.98
PHO88YBR106W HEK2P38199 381 aaKnown RBP RIP-Chip data2.71□□□□□ -1.98not detected
PHO88YBR106W ATG12P38316 186 aa2.71□□□□□ -1.98
PHO88YBR106W TRR2P38816 342 aa2.71□□□□□ -1.98
PHO88YBR106W IKI1P38874 309 aa2.71□□□□□ -1.98
PHO88YBR106W TEM1P38987 245 aa2.71□□□□□ -1.98
PHO88YBR106W BMT5P40493 336 aa2.71□□□□□ -1.98
PHO88YBR106W COS4P43542 379 aa2.71□□□□□ -1.98
PHO88YBR106W ILM1P47155 203 aa2.71□□□□□ -1.98
PHO88YBR106W FLC3P53121 802 aa2.71□□□□□ -1.98
PHO88YBR106W NSA1P53136 463 aaPredicted RBP2.71□□□□□ -1.98
PHO88YBR106W MRH4P53166 561 aa2.71□□□□□ -1.98
PHO88YBR106W NQM1P53228 333 aaPredicted RBP2.71□□□□□ -1.98
PHO88YBR106W SWT21P53873 357 aaPredicted RBP2.71□□□□□ -1.98
PHO88YBR106W ACT1P60010 375 aaKnown RBP2.71□□□□□ -1.98
PHO88YBR106W RHO3Q00245 231 aaKnown RBP2.71□□□□□ -1.98
PHO88YBR106W GOT1Q03554 138 aa2.71□□□□□ -1.98
PHO88YBR106W COQ10Q08058 207 aa2.71□□□□□ -1.98
PHO88YBR106W SYC1Q08553 188 aaPredicted RBP2.71□□□□□ -1.98
PHO88YBR106W ISD11Q6Q560 94 aa2.71□□□□□ -1.98
PHO88YBR106W YOL085CQ99345 113 aa2.71□□□□□ -1.98
PHO88YBR106W YKR104WP0CE69 306 aa2.7□□□□□ -1.98
PHO88YBR106W YCR102CP25608 368 aa2.7□□□□□ -1.98
PHO88YBR106W ATG15P25641 520 aa2.7□□□□□ -1.98
PHO88YBR106W SPS18P32572 300 aa2.7□□□□□ -1.98
PHO88YBR106W PRX1P34227 261 aaKnown RBP2.7□□□□□ -1.98
PHO88YBR106W CSG2P35206 410 aa2.7□□□□□ -1.98
PHO88YBR106W GOS1P38736 223 aa2.7□□□□□ -1.98
PHO88YBR106W YMR144WP40214 342 aaKnown RBP2.7□□□□□ -1.98
PHO88YBR106W MRPL49P40858 161 aaPredicted RBP2.7□□□□□ -1.98
PHO88YBR106W CIN5P40917 295 aa2.7□□□□□ -1.98
PHO88YBR106W PHB1P40961 287 aa2.7□□□□□ -1.98
PHO88YBR106W MCM22P47167 239 aa2.7□□□□□ -1.98
PHO88YBR106W MGA1P53050 456 aa2.7□□□□□ -1.98
PHO88YBR106W GTR2P53290 341 aa2.7□□□□□ -1.98
PHO88YBR106W FYV6P53913 173 aa2.7□□□□□ -1.98
PHO88YBR106W SPG4Q04438 115 aa2.7□□□□□ -1.98
PHO88YBR106W YML096WQ04489 525 aa2.7□□□□□ -1.98
PHO88YBR106W YOR289WQ12012 251 aaPredicted RBP2.7□□□□□ -1.98
PHO88YBR106W IES3Q12345 250 aa2.7□□□□□ -1.98
PHO88YBR106W RPL28P02406 149 aaKnown RBP2.69□□□□□ -1.98
PHO88YBR106W BCY1P07278 416 aaKnown RBP2.69□□□□□ -1.98
PHO88YBR106W RPS28BP0C0X0 67 aaKnown RBP2.69□□□□□ -1.98
PHO88YBR106W YOL163WP0CF20 169 aa2.69□□□□□ -1.98
PHO88YBR106W TCA17P32613 152 aa2.69□□□□□ -1.98
PHO88YBR106W UTP11P34247 250 aaPredicted RBP2.69□□□□□ -1.98
PHO88YBR106W ECM13P38195 257 aa2.69□□□□□ -1.98
PHO88YBR106W TRM7P38238 310 aaKnown RBP2.69□□□□□ -1.98
PHO88YBR106W YHL049CP38722 271 aa2.69□□□□□ -1.98
PHO88YBR106W SPL2P38839 148 aa2.69□□□□□ -1.98
PHO88YBR106W BDH1P39714 382 aa2.69□□□□□ -1.98
PHO88YBR106W YGR201CP42936 225 aa2.69□□□□□ -1.98
PHO88YBR106W YFH7P43591 353 aa2.69□□□□□ -1.98
PHO88YBR106W BUD13P46947 266 aaPredicted RBP2.69□□□□□ -1.98
PHO88YBR106W UFD1P53044 361 aa2.69□□□□□ -1.98
PHO88YBR106W YGR018CP53211 109 aa2.69□□□□□ -1.98
PHO88YBR106W FMP41P53889 259 aaKnown RBP2.69□□□□□ -1.98
PHO88YBR106W HEM25Q07534 307 aa2.69□□□□□ -1.98
PHO88YBR106W YLR036CQ07986 203 aa2.69□□□□□ -1.98
PHO88YBR106W RRP40Q08285 240 aaKnown RBP2.69□□□□□ -1.98
PHO88YBR106W YDL211CQ12121 372 aa2.69□□□□□ -1.98
PHO88YBR106W YPS3Q12303 508 aa2.69□□□□□ -1.98
PHO88YBR106W RPS28AQ3E7X9 67 aaPredicted RBP2.69□□□□□ -1.98
PHO88YBR106W PET54P10834 293 aa2.68□□□□□ -1.98
PHO88YBR106W URA6P15700 204 aa2.68□□□□□ -1.98
PHO88YBR106W COX10P21592 462 aa2.68□□□□□ -1.98
PHO88YBR106W CDC10P25342 322 aaKnown RBP2.68□□□□□ -1.98
PHO88YBR106W MDH3P32419 343 aaKnown RBP RIP-Chip data2.68□□□□□ -1.98not detected
PHO88YBR106W YER076CP40049 302 aa2.68□□□□□ -1.98
PHO88YBR106W COG3P40094 801 aa2.68□□□□□ -1.98
PHO88YBR106W YER189WP40104 122 aa2.68□□□□□ -1.98
PHO88YBR106W IRC18P47056 224 aa2.68□□□□□ -1.98
PHO88YBR106W PGU1P47180 361 aa2.68□□□□□ -1.98
PHO88YBR106W SMD1Q02260 146 aaPredicted RBP2.68□□□□□ -1.98
PHO88YBR106W PIN3Q06449 215 aa2.68□□□□□ -1.98
PHO88YBR106W LOA1Q06508 300 aa2.68□□□□□ -1.98
PHO88YBR106W YPD1Q07688 167 aa2.68□□□□□ -1.98
PHO88YBR106W SLD7Q08457 257 aa2.68□□□□□ -1.98
PHO88YBR106W YLR053CQ12026 108 aa2.68□□□□□ -1.98
PHO88YBR106W USB1Q12208 290 aaKnown RBP2.68□□□□□ -1.98
PHO88YBR106W PST1Q12355 444 aa2.68□□□□□ -1.98
PHO88YBR106W JLP1Q12358 412 aa2.68□□□□□ -1.98
PHO88YBR106W DCN1Q12395 269 aa2.68□□□□□ -1.98
PHO88YBR106W EMP46Q12396 444 aa2.68□□□□□ -1.98
PHO88YBR106W YAL063C-AQ3E791 96 aa2.68□□□□□ -1.98
PHO88YBR106W YBL008W-AQ3E821 79 aa2.68□□□□□ -1.98
PHO88YBR106W COS2P0CX12 379 aa2.67□□□□□ -1.98
PHO88YBR106W COS3P0CX13 379 aa2.67□□□□□ -1.98
PHO88YBR106W DPM1P14020 267 aaKnown RBP2.67□□□□□ -1.98
PHO88YBR106W UBC8P28263 218 aa2.67□□□□□ -1.98
PHO88YBR106W TRR1P29509 319 aaKnown RBP2.67□□□□□ -1.98
PHO88YBR106W GRE3P38715 327 aaKnown RBP RIP-Chip data2.67□□□□□ -1.98not detected
PHO88YBR106W YJR141WP47172 347 aaPredicted RBP2.67□□□□□ -1.98
PHO88YBR106W HST4P53688 370 aa2.67□□□□□ -1.98
Retrieved 100 of 5,963 RNA–protein pairs in 15.4 ms