RNA–Protein interactions for RNA: ENST00000624931.1

PCF11-207, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

Gene PCF11, Length 1,720 nt, Biotype TEC, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-207ENST00000624931 PCDHB13Q9Y5F0 798 aa18.84■□□□□ 0.61
PCF11-207ENST00000624931 PODXLO00592 558 aa18.83■□□□□ 0.61
PCF11-207ENST00000624931 DDX3YO15523 660 aaKnown RBP18.83■□□□□ 0.61
PCF11-207ENST00000624931 MAFO75444 373 aaPredicted RBP18.83■□□□□ 0.61
PCF11-207ENST00000624931 AKAP3O75969 853 aa18.83■□□□□ 0.61
PCF11-207ENST00000624931 MAPTP10636 758 aaKnown RBP18.83■□□□□ 0.61
PCF11-207ENST00000624931 HOXD8P13378 290 aaPredicted RBP18.83■□□□□ 0.61
PCF11-207ENST00000624931 ELNP15502 786 aa18.83■□□□□ 0.61
PCF11-207ENST00000624931 ARL2P36404 184 aa18.83■□□□□ 0.61
PCF11-207ENST00000624931 BEX3Q00994 111 aa18.83■□□□□ 0.61
PCF11-207ENST00000624931 TCERG1LQ5VWI1 586 aa18.83■□□□□ 0.61
PCF11-207ENST00000624931 OSBPL7Q9BZF2 842 aa18.83■□□□□ 0.61
PCF11-207ENST00000624931 CCDC134Q9H6E4 229 aa18.83■□□□□ 0.61
PCF11-207ENST00000624931 CNOT8Q9UFF9 292 aaKnown RBP18.83■□□□□ 0.61
PCF11-207ENST00000624931 DENND3A2RUS2 1198 aa18.83■□□□□ 0.6
PCF11-207ENST00000624931 AGTP01019 485 aa18.83■□□□□ 0.6
PCF11-207ENST00000624931 FGGP02679 453 aa18.83■□□□□ 0.6
PCF11-207ENST00000624931 CYBAP13498 195 aa18.83■□□□□ 0.6
PCF11-207ENST00000624931 ITGA4P13612 1032 aa18.83■□□□□ 0.6
PCF11-207ENST00000624931 INSRRP14616 1297 aa18.83■□□□□ 0.6
PCF11-207ENST00000624931 TMOD1P28289 359 aa18.83■□□□□ 0.6
PCF11-207ENST00000624931 SCTRP47872 440 aa18.83■□□□□ 0.6
PCF11-207ENST00000624931 CASP4P49662 377 aa18.83■□□□□ 0.6
PCF11-207ENST00000624931 GTF2BQ00403 316 aa18.83■□□□□ 0.6
PCF11-207ENST00000624931 ADCY2Q08462 1091 aa18.83■□□□□ 0.6
PCF11-207ENST00000624931 PPP2R5AQ15172 486 aa18.83■□□□□ 0.6
PCF11-207ENST00000624931 CYB5D1Q6P9G0 228 aa18.83■□□□□ 0.6
PCF11-207ENST00000624931 SYCP3Q8IZU3 236 aa18.83■□□□□ 0.6
PCF11-207ENST00000624931 CCT6BQ92526 530 aa18.83■□□□□ 0.6
PCF11-207ENST00000624931 BORCS6Q96GS4 357 aa18.83■□□□□ 0.6
PCF11-207ENST00000624931 ACCSQ96QU6 501 aa18.83■□□□□ 0.6
PCF11-207ENST00000624931 JPH2Q9BR39 696 aaPredicted RBP18.83■□□□□ 0.6
PCF11-207ENST00000624931 CFHR5Q9BXR6 569 aa18.83■□□□□ 0.6
PCF11-207ENST00000624931 NSRP1Q9H0G5 558 aaKnown RBP18.83■□□□□ 0.6
PCF11-207ENST00000624931 AGPAT3Q9NRZ7 376 aa18.83■□□□□ 0.6
PCF11-207ENST00000624931 MTRF1LQ9UGC7 380 aaKnown RBP18.83■□□□□ 0.6
PCF11-207ENST00000624931 USP20Q9Y2K6 914 aa18.83■□□□□ 0.6
PCF11-207ENST00000624931 CASP8AP2Q9UKL3 1982 aa18.82■□□□□ 0.6
PCF11-207ENST00000624931 ANKRD62A6NC57 917 aa18.82■□□□□ 0.6
PCF11-207ENST00000624931 HBP1O60381 514 aa18.82■□□□□ 0.6
PCF11-207ENST00000624931 GJB1P08034 283 aa18.82■□□□□ 0.6
PCF11-207ENST00000624931 CHRNA3P32297 505 aa18.82■□□□□ 0.6
PCF11-207ENST00000624931 FLT3P36888 993 aa18.82■□□□□ 0.6
PCF11-207ENST00000624931 SLC26A2P50443 739 aa18.82■□□□□ 0.6
PCF11-207ENST00000624931 PMS2P54278 862 aa18.82■□□□□ 0.6
PCF11-207ENST00000624931 KIF22Q14807 665 aa18.82■□□□□ 0.6
PCF11-207ENST00000624931 DENND2CQ68D51 928 aa18.82■□□□□ 0.6
PCF11-207ENST00000624931 TAS1R3Q7RTX0 852 aa18.82■□□□□ 0.6
PCF11-207ENST00000624931 SLC35G2Q8TBE7 412 aa18.82■□□□□ 0.6
PCF11-207ENST00000624931 SPIRE2Q8WWL2 714 aa18.82■□□□□ 0.6
PCF11-207ENST00000624931 ZNF668Q96K58 619 aaPredicted RBP18.82■□□□□ 0.6
PCF11-207ENST00000624931 IFT74Q96LB3 600 aa18.82■□□□□ 0.6
PCF11-207ENST00000624931 ST6GALNAC4Q9H4F1 302 aa18.82■□□□□ 0.6
PCF11-207ENST00000624931 SIP14410 1827 aa18.81■□□□□ 0.6
PCF11-207ENST00000624931 MYADML2A6NDP7 307 aa18.81■□□□□ 0.6
PCF11-207ENST00000624931 LRRIQ4A6NIV6 560 aa18.81■□□□□ 0.6
PCF11-207ENST00000624931 CCT8L1PA6NM43 557 aa18.81■□□□□ 0.6
PCF11-207ENST00000624931 H3BRB1 525 aa18.81■□□□□ 0.6
PCF11-207ENST00000624931 KIF1CO43896 1103 aaKnown RBP18.81■□□□□ 0.6
PCF11-207ENST00000624931 EVI5O60447 810 aa18.81■□□□□ 0.6
PCF11-207ENST00000624931 BUB1BO60566 1050 aaPredicted RBP18.81■□□□□ 0.6
PCF11-207ENST00000624931 EZRP15311 586 aaKnown RBP18.81■□□□□ 0.6
PCF11-207ENST00000624931 MMP13P45452 471 aa18.81■□□□□ 0.6
PCF11-207ENST00000624931 CYP2J2P51589 502 aa18.81■□□□□ 0.6
PCF11-207ENST00000624931 CLCN3P51790 818 aa18.81■□□□□ 0.6
PCF11-207ENST00000624931 RTP1P59025 263 aa18.81■□□□□ 0.6
PCF11-207ENST00000624931 CAPSQ13938 189 aa18.81■□□□□ 0.6
PCF11-207ENST00000624931 SLMAPQ14BN4 828 aa18.81■□□□□ 0.6
PCF11-207ENST00000624931 DGKDQ16760 1214 aa18.81■□□□□ 0.6
PCF11-207ENST00000624931 MFSD14CQ5VZR4 134 aa18.81■□□□□ 0.6
PCF11-207ENST00000624931 FAM186BQ8IYM0 893 aa18.81■□□□□ 0.6
PCF11-207ENST00000624931 HVCN1Q96D96 273 aa18.81■□□□□ 0.6
PCF11-207ENST00000624931 TUT1Q9H6E5 874 aaKnown RBP18.81■□□□□ 0.6
PCF11-207ENST00000624931 ZDHHC18Q9NUE0 388 aa18.81■□□□□ 0.6
PCF11-207ENST00000624931 TBX20Q9UMR3 447 aa18.81■□□□□ 0.6
PCF11-207ENST00000624931 ATP8A1Q9Y2Q0 1164 aa18.81■□□□□ 0.6
PCF11-207ENST00000624931 CFAP73A6NFT4 308 aa18.8■□□□□ 0.6
PCF11-207ENST00000624931 A6NJR5 290 aa18.8■□□□□ 0.6
PCF11-207ENST00000624931 GPR25O00155 361 aa18.8■□□□□ 0.6
PCF11-207ENST00000624931 C22orf31O95567 290 aa18.8■□□□□ 0.6
PCF11-207ENST00000624931 TNFAIP3P21580 790 aa18.8■□□□□ 0.6
PCF11-207ENST00000624931 IRF5Q13568 498 aa18.8■□□□□ 0.6
PCF11-207ENST00000624931 ALCAMQ13740 583 aa18.8■□□□□ 0.6
PCF11-207ENST00000624931 MYBPC2Q14324 1141 aa18.8■□□□□ 0.6
PCF11-207ENST00000624931 QPCTQ16769 361 aa18.8■□□□□ 0.6
PCF11-207ENST00000624931 UBL4BQ8N7F7 174 aa18.8■□□□□ 0.6
PCF11-207ENST00000624931 ZSWIM2Q8NEG5 633 aa18.8■□□□□ 0.6
PCF11-207ENST00000624931 LNX1Q8TBB1 728 aaPredicted RBP18.8■□□□□ 0.6
PCF11-207ENST00000624931 SYT11Q9BT88 431 aa18.8■□□□□ 0.6
PCF11-207ENST00000624931 DPH5Q9H2P9 285 aa18.8■□□□□ 0.6
PCF11-207ENST00000624931 IGKV6-21A0A0C4DH24 114 aa18.8■□□□□ 0.6
PCF11-207ENST00000624931 ANKRD63C9JTQ0 380 aa18.8■□□□□ 0.6
PCF11-207ENST00000624931 DNM1LO00429 736 aa18.8■□□□□ 0.6
PCF11-207ENST00000624931 AKR1A1P14550 325 aa18.8■□□□□ 0.6
PCF11-207ENST00000624931 CNGA1P29973 690 aa18.8■□□□□ 0.6
PCF11-207ENST00000624931 CACNB2Q08289 660 aaPredicted RBP18.8■□□□□ 0.6
PCF11-207ENST00000624931 C11orf63Q6NUN7 778 aa18.8■□□□□ 0.6
PCF11-207ENST00000624931 PRPF31Q8WWY3 499 aaKnown RBP18.8■□□□□ 0.6
PCF11-207ENST00000624931 RPS6KC1Q96S38 1066 aa18.8■□□□□ 0.6
PCF11-207ENST00000624931 CBWD1Q9BRT8 395 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms