RNA–Protein interactions for RNA: ENST00000594298.5

SHKBP1-203, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-203ENST00000594298 LTB4R2Q9NPC1 389 aa19.16■□□□□ 0.66
SHKBP1-203ENST00000594298 MTF2Q9Y483 593 aaPredicted RBP19.16■□□□□ 0.66
SHKBP1-203ENST00000594298 FAM170BA6NMN3 283 aa19.15■□□□□ 0.66
SHKBP1-203ENST00000594298 H7C4K7 107 aa19.15■□□□□ 0.66
SHKBP1-203ENST00000594298 LRG1P02750 347 aa19.15■□□□□ 0.66
SHKBP1-203ENST00000594298 UBXN2BQ14CS0 331 aa19.15■□□□□ 0.66
SHKBP1-203ENST00000594298 PRSS36Q5K4E3 855 aa19.15■□□□□ 0.66
SHKBP1-203ENST00000594298 KRI1Q8N9T8 703 aaKnown RBP19.15■□□□□ 0.66
SHKBP1-203ENST00000594298 CLDN23Q96B33 292 aa19.15■□□□□ 0.66
SHKBP1-203ENST00000594298 ELSPBP1Q96BH3 223 aa19.15■□□□□ 0.66
SHKBP1-203ENST00000594298 MCRS1Q96EZ8 462 aa19.15■□□□□ 0.66
SHKBP1-203ENST00000594298 PNMA5Q96PV4 448 aa19.15■□□□□ 0.66
SHKBP1-203ENST00000594298 NELL2Q99435 816 aa19.15■□□□□ 0.66
SHKBP1-203ENST00000594298 CCDC39Q9UFE4 941 aa19.15■□□□□ 0.66
SHKBP1-203ENST00000594298 KCNG1Q9UIX4 513 aa19.15■□□□□ 0.66
SHKBP1-203ENST00000594298 FBXO2Q9UK22 296 aaPredicted RBP19.15■□□□□ 0.66
SHKBP1-203ENST00000594298 CFAP45Q9UL16 551 aa19.15■□□□□ 0.66
SHKBP1-203ENST00000594298 GVINP1Q7Z2Y8 2422 aa19.14■□□□□ 0.66
SHKBP1-203ENST00000594298 PRRG1O14668 218 aa19.14■□□□□ 0.65
SHKBP1-203ENST00000594298 MEFVO15553 781 aaPredicted RBP19.14■□□□□ 0.65
SHKBP1-203ENST00000594298 GUCY2CP25092 1073 aa19.14■□□□□ 0.65
SHKBP1-203ENST00000594298 TMEM119Q4V9L6 283 aa19.14■□□□□ 0.65
SHKBP1-203ENST00000594298 ZBTB41Q5SVQ8 909 aa19.14■□□□□ 0.65
SHKBP1-203ENST00000594298 TPGS2Q68CL5 300 aa19.14■□□□□ 0.65
SHKBP1-203ENST00000594298 POTEHQ6S545 545 aa19.14■□□□□ 0.65
SHKBP1-203ENST00000594298 SYT2Q8N9I0 419 aaPredicted RBP19.14■□□□□ 0.65
SHKBP1-203ENST00000594298 SPIRE2Q8WWL2 714 aa19.14■□□□□ 0.65
SHKBP1-203ENST00000594298 RUBCNQ92622 972 aa19.14■□□□□ 0.65
SHKBP1-203ENST00000594298 SUSD3Q96L08 255 aa19.14■□□□□ 0.65
SHKBP1-203ENST00000594298 PLIN2Q99541 437 aa19.14■□□□□ 0.65
SHKBP1-203ENST00000594298 TCHPQ9BT92 498 aa19.14■□□□□ 0.65
SHKBP1-203ENST00000594298 PLA2G2FQ9BZM2 168 aa19.14■□□□□ 0.65
SHKBP1-203ENST00000594298 CCSER1Q9C0I3 900 aa19.14■□□□□ 0.65
SHKBP1-203ENST00000594298 SPATA6Q9NWH7 488 aaPredicted RBP19.14■□□□□ 0.65
SHKBP1-203ENST00000594298 KCND2Q9NZV8 630 aa19.14■□□□□ 0.65
SHKBP1-203ENST00000594298 FBXL5Q9UKA1 691 aa19.14■□□□□ 0.65
SHKBP1-203ENST00000594298 MAFFQ9ULX9 164 aa19.14■□□□□ 0.65
SHKBP1-203ENST00000594298 NUB1Q9Y5A7 615 aa19.14■□□□□ 0.65
SHKBP1-203ENST00000594298 MYH15Q9Y2K3 1946 aa19.13■□□□□ 0.65
SHKBP1-203ENST00000594298 DCHS1Q96JQ0 3298 aa19.13■□□□□ 0.65
SHKBP1-203ENST00000594298 ZNF197O14709 1029 aa19.13■□□□□ 0.65
SHKBP1-203ENST00000594298 SPTLC2O15270 562 aa19.13■□□□□ 0.65
SHKBP1-203ENST00000594298 LAMTOR5O43504 91 aa19.13■□□□□ 0.65
SHKBP1-203ENST00000594298 TOM1L1O75674 476 aa19.13■□□□□ 0.65
SHKBP1-203ENST00000594298 YEATS4O95619 227 aa19.13■□□□□ 0.65
SHKBP1-203ENST00000594298 PLA2G4BP0C869 781 aa19.13■□□□□ 0.65
SHKBP1-203ENST00000594298 CEBPBP17676 345 aa19.13■□□□□ 0.65
SHKBP1-203ENST00000594298 RPS9P46781 194 aaKnown RBP19.13■□□□□ 0.65
SHKBP1-203ENST00000594298 TPRG1Q6ZUI0 275 aa19.13■□□□□ 0.65
SHKBP1-203ENST00000594298 KCNK18Q7Z418 384 aa19.13■□□□□ 0.65
SHKBP1-203ENST00000594298 SUMF1Q8NBK3 374 aa19.13■□□□□ 0.65
SHKBP1-203ENST00000594298 LINC00301Q8NCQ3 95 aa19.13■□□□□ 0.65
SHKBP1-203ENST00000594298 DNASE1L2Q92874 299 aa19.13■□□□□ 0.65
SHKBP1-203ENST00000594298 C18orf25Q96B23 403 aaPredicted RBP19.13■□□□□ 0.65
SHKBP1-203ENST00000594298 CYP4F11Q9HBI6 524 aa19.13■□□□□ 0.65
SHKBP1-203ENST00000594298 TFIP11Q9UBB9 837 aaKnown RBP19.13■□□□□ 0.65
SHKBP1-203ENST00000594298 INSL5Q9Y5Q6 135 aa19.13■□□□□ 0.65
SHKBP1-203ENST00000594298 DOCK6Q96HP0 2047 aa19.13■□□□□ 0.65
SHKBP1-203ENST00000594298 NOTCH4Q99466 2003 aa19.13■□□□□ 0.65
SHKBP1-203ENST00000594298 COL4A3Q01955 1670 aa19.12■□□□□ 0.65
SHKBP1-203ENST00000594298 SPTLC1O15269 473 aa19.12■□□□□ 0.65
SHKBP1-203ENST00000594298 SLC16A4O15374 487 aa19.12■□□□□ 0.65
SHKBP1-203ENST00000594298 NCAM2O15394 837 aa19.12■□□□□ 0.65
SHKBP1-203ENST00000594298 KINO60870 393 aaKnown RBP19.12■□□□□ 0.65
SHKBP1-203ENST00000594298 PPP6R2O75170 966 aa19.12■□□□□ 0.65
SHKBP1-203ENST00000594298 SEC24AO95486 1093 aa19.12■□□□□ 0.65
SHKBP1-203ENST00000594298 CD72P21854 359 aa19.12■□□□□ 0.65
SHKBP1-203ENST00000594298 FCARP24071 287 aa19.12■□□□□ 0.65
SHKBP1-203ENST00000594298 GRIN1Q05586 938 aa19.12■□□□□ 0.65
SHKBP1-203ENST00000594298 STRN3Q13033 797 aa19.12■□□□□ 0.65
SHKBP1-203ENST00000594298 SLC10A6Q3KNW5 377 aa19.12■□□□□ 0.65
SHKBP1-203ENST00000594298 CTXN3Q4LDR2 81 aa19.12■□□□□ 0.65
SHKBP1-203ENST00000594298 TANGO2Q6ICL3 276 aa19.12■□□□□ 0.65
SHKBP1-203ENST00000594298 ZNF852Q6ZMS4 543 aa19.12■□□□□ 0.65
SHKBP1-203ENST00000594298 KIAA2013Q8IYS2 634 aa19.12■□□□□ 0.65
SHKBP1-203ENST00000594298 RMDN1Q96DB5 314 aa19.12■□□□□ 0.65
SHKBP1-203ENST00000594298 CORO1BQ9BR76 489 aa19.12■□□□□ 0.65
SHKBP1-203ENST00000594298 MRPS17Q9Y2R5 130 aaKnown RBP19.12■□□□□ 0.65
SHKBP1-203ENST00000594298 PCDHGA2Q9Y5H1 932 aa19.12■□□□□ 0.65
SHKBP1-203ENST00000594298 ATP6V1DQ9Y5K8 247 aa19.12■□□□□ 0.65
SHKBP1-203ENST00000594298 SHISA7A6NL88 538 aa19.11■□□□□ 0.65
SHKBP1-203ENST00000594298 PLS3P13797 630 aa19.11■□□□□ 0.65
SHKBP1-203ENST00000594298 TARSP26639 723 aaKnown RBP19.11■□□□□ 0.65
SHKBP1-203ENST00000594298 ARPP19P56211 112 aa19.11■□□□□ 0.65
SHKBP1-203ENST00000594298 NOLC1Q14978 699 aaKnown RBP eCLIP19.11■□□□□ 0.65
SHKBP1-203ENST00000594298 ZNF280DQ6N043 979 aa19.11■□□□□ 0.65
SHKBP1-203ENST00000594298 ZPBP2Q6X784 338 aa19.11■□□□□ 0.65
SHKBP1-203ENST00000594298 PDZD4Q76G19 769 aaPredicted RBP19.11■□□□□ 0.65
SHKBP1-203ENST00000594298 TMEM161BQ8NDZ6 487 aa19.11■□□□□ 0.65
SHKBP1-203ENST00000594298 APPL2Q8NEU8 664 aa19.11■□□□□ 0.65
SHKBP1-203ENST00000594298 DDX12PQ92771 950 aa19.11■□□□□ 0.65
SHKBP1-203ENST00000594298 NELL1Q92832 810 aa19.11■□□□□ 0.65
SHKBP1-203ENST00000594298 ZBTB45Q96K62 511 aaPredicted RBP19.11■□□□□ 0.65
SHKBP1-203ENST00000594298 PLEKHA5Q9HAU0 1116 aa19.11■□□□□ 0.65
SHKBP1-203ENST00000594298 ZFP14Q9HCL3 533 aa19.11■□□□□ 0.65
SHKBP1-203ENST00000594298 AFF4Q9UHB7 1163 aaKnown RBP19.11■□□□□ 0.65
SHKBP1-203ENST00000594298 GTF3C5Q9Y5Q8 519 aaPredicted RBP19.11■□□□□ 0.65
SHKBP1-203ENST00000594298 SFI1A8K8P3 1242 aa19.1■□□□□ 0.65
SHKBP1-203ENST00000594298 MAPTP10636 758 aaKnown RBP19.1■□□□□ 0.65
SHKBP1-203ENST00000594298 PLCG1P19174 1290 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms