RNA–Protein interactions for RNA: ENST00000588917.2

CIRBP-220, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-220ENST00000588917 MED15Q96RN5 788 aa21.13■□□□□ 0.97
CIRBP-220ENST00000588917 CERS4Q9HA82 394 aa21.13■□□□□ 0.97
CIRBP-220ENST00000588917 GOLGA2P5Q9HBQ8 144 aa21.13■□□□□ 0.97
CIRBP-220ENST00000588917 MAGEC2Q9UBF1 373 aaPredicted RBP21.13■□□□□ 0.97
CIRBP-220ENST00000588917 NUB1Q9Y5A7 615 aa21.13■□□□□ 0.97
CIRBP-220ENST00000588917 CITO14578 2027 aa21.12■□□□□ 0.97
CIRBP-220ENST00000588917 PHACTR2O75167 634 aa21.12■□□□□ 0.97
CIRBP-220ENST00000588917 PBX3P40426 434 aa21.12■□□□□ 0.97
CIRBP-220ENST00000588917 ZNF165P49910 485 aa21.12■□□□□ 0.97
CIRBP-220ENST00000588917 MYL5Q02045 173 aa21.12■□□□□ 0.97
CIRBP-220ENST00000588917 PTPROQ16827 1216 aa21.12■□□□□ 0.97
CIRBP-220ENST00000588917 TCERG1LQ5VWI1 586 aa21.12■□□□□ 0.97
CIRBP-220ENST00000588917 PDE12Q6L8Q7 609 aaKnown RBP21.12■□□□□ 0.97
CIRBP-220ENST00000588917 C11orf57Q6ZUT1 292 aaPredicted RBP21.12■□□□□ 0.97
CIRBP-220ENST00000588917 LRRC52Q8N7C0 313 aa21.12■□□□□ 0.97
CIRBP-220ENST00000588917 OR5B17Q8NGF7 314 aa21.12■□□□□ 0.97
CIRBP-220ENST00000588917 SPPL3Q8TCT6 385 aa21.12■□□□□ 0.97
CIRBP-220ENST00000588917 ZNF560Q96MR9 790 aa21.12■□□□□ 0.97
CIRBP-220ENST00000588917 PAAF1Q9BRP4 392 aa21.12■□□□□ 0.97
CIRBP-220ENST00000588917 MTMR12Q9C0I1 747 aa21.12■□□□□ 0.97
CIRBP-220ENST00000588917 LMCD1Q9NZU5 365 aa21.12■□□□□ 0.97
CIRBP-220ENST00000588917 SSX2IPQ9Y2D8 614 aa21.12■□□□□ 0.97
CIRBP-220ENST00000588917 SF3B1O75533 1304 aaKnown RBP eCLIP21.11■□□□□ 0.972e-7■■□□□ 14.1
CIRBP-220ENST00000588917 ARHGEF37A1IGU5 675 aa21.11■□□□□ 0.97
CIRBP-220ENST00000588917 C4BPAP04003 597 aaKnown RBP21.11■□□□□ 0.97
CIRBP-220ENST00000588917 ITGB3P05106 788 aa21.11■□□□□ 0.97
CIRBP-220ENST00000588917 ITGB1P05556 798 aa21.11■□□□□ 0.97
CIRBP-220ENST00000588917 KRT19P08727 400 aa21.11■□□□□ 0.97
CIRBP-220ENST00000588917 DLG4P78352 724 aa21.11■□□□□ 0.97
CIRBP-220ENST00000588917 MYO1EQ12965 1108 aa21.11■□□□□ 0.97
CIRBP-220ENST00000588917 TRPC3Q13507 836 aa21.11■□□□□ 0.97
CIRBP-220ENST00000588917 CREBRFQ8IUR6 639 aa21.11■□□□□ 0.97
CIRBP-220ENST00000588917 C1orf127Q8N9H9 656 aa21.11■□□□□ 0.97
CIRBP-220ENST00000588917 PLEKHO2Q8TD55 490 aa21.11■□□□□ 0.97
CIRBP-220ENST00000588917 ZNF516Q92618 1163 aa21.11■□□□□ 0.97
CIRBP-220ENST00000588917 GZF1Q9H116 711 aaPredicted RBP21.11■□□□□ 0.97
CIRBP-220ENST00000588917 AGAP1Q9UPQ3 857 aa21.11■□□□□ 0.97
CIRBP-220ENST00000588917 NFE2L3Q9Y4A8 694 aa21.11■□□□□ 0.97
CIRBP-220ENST00000588917 GBF1Q92538 1859 aa21.11■□□□□ 0.97
CIRBP-220ENST00000588917 MUC3AQ02505 3323 aa21.11■□□□□ 0.97
CIRBP-220ENST00000588917 TDRD15B5MCY1 1934 aaKnown RBP21.1■□□□□ 0.97
CIRBP-220ENST00000588917 BECN2A8MW95 431 aa21.1■□□□□ 0.97
CIRBP-220ENST00000588917 KIF4AO95239 1232 aa21.1■□□□□ 0.97
CIRBP-220ENST00000588917 ATICP31939 592 aa21.1■□□□□ 0.97
CIRBP-220ENST00000588917 CETN1Q12798 172 aa21.1■□□□□ 0.97
CIRBP-220ENST00000588917 BIRC3Q13489 604 aa21.1■□□□□ 0.97
CIRBP-220ENST00000588917 SV2CQ496J9 727 aa21.1■□□□□ 0.97
CIRBP-220ENST00000588917 LMBRD2Q68DH5 695 aaPredicted RBP21.1■□□□□ 0.97
CIRBP-220ENST00000588917 KRT39Q6A163 491 aa21.1■□□□□ 0.97
CIRBP-220ENST00000588917 TRIM59Q8IWR1 403 aa21.1■□□□□ 0.97
CIRBP-220ENST00000588917 TMEM8AQ9HCN3 771 aa21.1■□□□□ 0.97
CIRBP-220ENST00000588917 ALG13Q9NP73 1137 aaKnown RBP21.1■□□□□ 0.97
CIRBP-220ENST00000588917 NGRNQ9NPE2 291 aaKnown RBP21.1■□□□□ 0.97
CIRBP-220ENST00000588917 MARCH5Q9NX47 278 aa21.1■□□□□ 0.97
CIRBP-220ENST00000588917 UTP18Q9Y5J1 556 aaKnown RBP eCLIP21.1■□□□□ 0.97
CIRBP-220ENST00000588917 RALGAPA2Q2PPJ7 1873 aa21.09■□□□□ 0.97
CIRBP-220ENST00000588917 PTPRJQ12913 1337 aa21.09■□□□□ 0.97
CIRBP-220ENST00000588917 SOD2P04179 222 aa21.09■□□□□ 0.97
CIRBP-220ENST00000588917 EEF1GP26641 437 aaKnown RBP21.09■□□□□ 0.97
CIRBP-220ENST00000588917 POLR2BP30876 1174 aaKnown RBP21.09■□□□□ 0.97
CIRBP-220ENST00000588917 TAF6P49848 677 aa21.09■□□□□ 0.97
CIRBP-220ENST00000588917 LILRA4P59901 499 aa21.09■□□□□ 0.97
CIRBP-220ENST00000588917 USP41Q3LFD5 358 aa21.09■□□□□ 0.97
CIRBP-220ENST00000588917 ZACNQ401N2 412 aa21.09■□□□□ 0.97
CIRBP-220ENST00000588917 DCAF17Q5H9S7 520 aaPredicted RBP21.09■□□□□ 0.97
CIRBP-220ENST00000588917 FUT10Q6P4F1 479 aa21.09■□□□□ 0.97
CIRBP-220ENST00000588917 PDXDC1Q6P996 788 aa21.09■□□□□ 0.97
CIRBP-220ENST00000588917 LRSAM1Q6UWE0 723 aa21.09■□□□□ 0.97
CIRBP-220ENST00000588917 SV2AQ7L0J3 742 aa21.09■□□□□ 0.97
CIRBP-220ENST00000588917 SPRED2Q7Z698 418 aa21.09■□□□□ 0.97
CIRBP-220ENST00000588917 GPR65Q8IYL9 337 aa21.09■□□□□ 0.97
CIRBP-220ENST00000588917 ANKRD20A12PQ8NF67 263 aa21.09■□□□□ 0.97
CIRBP-220ENST00000588917 POF1BQ8WVV4 589 aa21.09■□□□□ 0.97
CIRBP-220ENST00000588917 RABGGTAQ92696 567 aa21.09■□□□□ 0.97
CIRBP-220ENST00000588917 CNOT6LQ96LI5 555 aaKnown RBP21.09■□□□□ 0.97
CIRBP-220ENST00000588917 CACNG4Q9UBN1 327 aa21.09■□□□□ 0.97
CIRBP-220ENST00000588917 LPXNO60711 386 aa21.08■□□□□ 0.97
CIRBP-220ENST00000588917 N4BP1O75113 896 aaKnown RBP21.08■□□□□ 0.97
CIRBP-220ENST00000588917 MTIF2P46199 727 aaKnown RBP21.08■□□□□ 0.97
CIRBP-220ENST00000588917 GUCY2FP51841 1108 aa21.08■□□□□ 0.97
CIRBP-220ENST00000588917 TPM4P67936 248 aa21.08■□□□□ 0.97
CIRBP-220ENST00000588917 SGSM1Q2NKQ1 1148 aa21.08■□□□□ 0.97
CIRBP-220ENST00000588917 C1orf220Q5T0J3 134 aa21.08■□□□□ 0.97
CIRBP-220ENST00000588917 KIAA1841Q6NSI8 718 aa21.08■□□□□ 0.97
CIRBP-220ENST00000588917 DSTYKQ6XUX3 929 aa21.08■□□□□ 0.97
CIRBP-220ENST00000588917 C15orf39Q6ZRI6 1047 aa21.08■□□□□ 0.97
CIRBP-220ENST00000588917 TMC7Q7Z402 723 aa21.08■□□□□ 0.97
CIRBP-220ENST00000588917 TMEM173Q86WV6 379 aaPredicted RBP21.08■□□□□ 0.97
CIRBP-220ENST00000588917 IRF2BP1Q8IU81 584 aa21.08■□□□□ 0.97
CIRBP-220ENST00000588917 VPS52Q8N1B4 723 aa21.08■□□□□ 0.97
CIRBP-220ENST00000588917 CCDC150Q8NCX0 1101 aa21.08■□□□□ 0.97
CIRBP-220ENST00000588917 ADAMTS19Q8TE59 1207 aa21.08■□□□□ 0.97
CIRBP-220ENST00000588917 TAF4BQ92750 862 aa21.08■□□□□ 0.97
CIRBP-220ENST00000588917 SLC35C1Q96A29 364 aa21.08■□□□□ 0.97
CIRBP-220ENST00000588917 TLR9Q9NR96 1032 aa21.08■□□□□ 0.97
CIRBP-220ENST00000588917 KPNA7A9QM74 516 aa21.07■□□□□ 0.96
CIRBP-220ENST00000588917 GRM6O15303 877 aa21.07■□□□□ 0.96
CIRBP-220ENST00000588917 PMM2O15305 246 aa21.07■□□□□ 0.96
CIRBP-220ENST00000588917 P4HA2O15460 535 aa21.07■□□□□ 0.96
CIRBP-220ENST00000588917 STAU1O95793 577 aaKnown RBP21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms