RNA–Protein interactions for RNA: ENST00000588745.5

SMAD4-205, Transcript of SMAD family member 4, humanhuman

TSL 5 BASIC

Gene SMAD4, Length 1,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-205ENST00000588745 PAK2Q13177 524 aa12.24□□□□□ -0.45
SMAD4-205ENST00000588745 LPIN1Q14693 890 aa12.24□□□□□ -0.45
SMAD4-205ENST00000588745 MTFR1Q15390 333 aa12.24□□□□□ -0.45
SMAD4-205ENST00000588745 ALKAL1Q6UXT8 129 aa12.24□□□□□ -0.45
SMAD4-205ENST00000588745 NOP9Q86U38 636 aaKnown RBP12.24□□□□□ -0.45
SMAD4-205ENST00000588745 SLC47A2Q86VL8 602 aa12.24□□□□□ -0.45
SMAD4-205ENST00000588745 RPUSD2Q8IZ73 545 aaKnown RBP12.24□□□□□ -0.45
SMAD4-205ENST00000588745 SMG8Q8ND04 991 aaKnown RBP12.24□□□□□ -0.45
SMAD4-205ENST00000588745 U2AF1L4Q8WU68 220 aaKnown RBP12.24□□□□□ -0.45
SMAD4-205ENST00000588745 SECISBP2LQ93073 1101 aaKnown RBP12.24□□□□□ -0.45
SMAD4-205ENST00000588745 FAXDC2Q96IV6 333 aa12.24□□□□□ -0.45
SMAD4-205ENST00000588745 DEFB118Q96PH6 123 aa12.24□□□□□ -0.45
SMAD4-205ENST00000588745 WDR24Q96S15 920 aa12.24□□□□□ -0.45
SMAD4-205ENST00000588745 SEZ6LQ9BYH1 1024 aa12.24□□□□□ -0.45
SMAD4-205ENST00000588745 VRTNQ9H8Y1 702 aa12.24□□□□□ -0.45
SMAD4-205ENST00000588745 ERVK-5Q9HDB9 667 aa12.24□□□□□ -0.45
SMAD4-205ENST00000588745 OGDHLQ9ULD0 1010 aa12.24□□□□□ -0.45
SMAD4-205ENST00000588745 PAXBP1Q9Y5B6 917 aa12.24□□□□□ -0.45
SMAD4-205ENST00000588745 STAU1O95793 577 aaKnown RBP12.23□□□□□ -0.45
SMAD4-205ENST00000588745 GHRP10912 638 aa12.23□□□□□ -0.45
SMAD4-205ENST00000588745 CCL5P13501 91 aa12.23□□□□□ -0.45
SMAD4-205ENST00000588745 AKAP5P24588 427 aa12.23□□□□□ -0.45
SMAD4-205ENST00000588745 POLR2BP30876 1174 aaKnown RBP12.23□□□□□ -0.45
SMAD4-205ENST00000588745 CD52P31358 61 aa12.23□□□□□ -0.45
SMAD4-205ENST00000588745 GUCY2FP51841 1108 aa12.23□□□□□ -0.45
SMAD4-205ENST00000588745 C1QTNF8P60827 252 aa12.23□□□□□ -0.45
SMAD4-205ENST00000588745 XKR4Q5GH76 650 aa12.23□□□□□ -0.45
SMAD4-205ENST00000588745 ZNF667Q5HYK9 610 aa12.23□□□□□ -0.45
SMAD4-205ENST00000588745 ZNF569Q5MCW4 686 aa12.23□□□□□ -0.45
SMAD4-205ENST00000588745 ZNF618Q5T7W0 954 aa12.23□□□□□ -0.45
SMAD4-205ENST00000588745 SLC35F6Q8N357 371 aa12.23□□□□□ -0.45
SMAD4-205ENST00000588745 RBBP8NLQ8NC74 664 aaPredicted RBP12.23□□□□□ -0.45
SMAD4-205ENST00000588745 BEST2Q8NFU1 509 aa12.23□□□□□ -0.45
SMAD4-205ENST00000588745 ZMAT2Q96NC0 199 aaKnown RBP12.23□□□□□ -0.45
SMAD4-205ENST00000588745 TSPAN18Q96SJ8 248 aa12.23□□□□□ -0.45
SMAD4-205ENST00000588745 PACSIN1Q9BY11 444 aa12.23□□□□□ -0.45
SMAD4-205ENST00000588745 TRPV6Q9H1D0 765 aa12.23□□□□□ -0.45
SMAD4-205ENST00000588745 CXCL16Q9H2A7 254 aa12.23□□□□□ -0.45
SMAD4-205ENST00000588745 AGO3Q9H9G7 860 aaKnown RBP12.23□□□□□ -0.45
SMAD4-205ENST00000588745 SEPT11Q9NVA2 429 aaKnown RBP12.23□□□□□ -0.45
SMAD4-205ENST00000588745 DPP3Q9NY33 737 aa12.23□□□□□ -0.45
SMAD4-205ENST00000588745 PADI3Q9ULW8 664 aa12.23□□□□□ -0.45
SMAD4-205ENST00000588745 UBQLN1Q9UMX0 589 aaKnown RBP12.23□□□□□ -0.45
SMAD4-205ENST00000588745 CNTN6Q9UQ52 1028 aa12.23□□□□□ -0.45
SMAD4-205ENST00000588745 R3HCC1Q9Y3T6 440 aaKnown RBP12.23□□□□□ -0.45
SMAD4-205ENST00000588745 PCDHB4Q9Y5E5 795 aa12.23□□□□□ -0.45
SMAD4-205ENST00000588745 SQORQ9Y6N5 450 aa12.23□□□□□ -0.45
SMAD4-205ENST00000588745 TRIP11Q15643 1979 aa12.23□□□□□ -0.45
SMAD4-205ENST00000588745 MACROD2A1Z1Q3 448 aa12.22□□□□□ -0.45
SMAD4-205ENST00000588745 BTNL10A8MVZ5 291 aa12.22□□□□□ -0.45
SMAD4-205ENST00000588745 H2AFZP0C0S5 128 aa12.22□□□□□ -0.45
SMAD4-205ENST00000588745 CKBP12277 381 aa12.22□□□□□ -0.45
SMAD4-205ENST00000588745 KCNE1P15382 129 aa12.22□□□□□ -0.45
SMAD4-205ENST00000588745 CHRNB2P17787 502 aa12.22□□□□□ -0.45
SMAD4-205ENST00000588745 CASQ1P31415 396 aa12.22□□□□□ -0.45
SMAD4-205ENST00000588745 RAB27AP51159 221 aa12.22□□□□□ -0.45
SMAD4-205ENST00000588745 ZNF132P52740 706 aa12.22□□□□□ -0.45
SMAD4-205ENST00000588745 BPIFB4P59827 614 aa12.22□□□□□ -0.45
SMAD4-205ENST00000588745 YWHAEP62258 255 aaKnown RBP12.22□□□□□ -0.45
SMAD4-205ENST00000588745 RBP5P82980 135 aa12.22□□□□□ -0.45
SMAD4-205ENST00000588745 FMO1Q01740 532 aa12.22□□□□□ -0.45
SMAD4-205ENST00000588745 CDR2Q01850 454 aa12.22□□□□□ -0.45
SMAD4-205ENST00000588745 ZBTB6Q15916 424 aa12.22□□□□□ -0.45
SMAD4-205ENST00000588745 GLRA4Q5JXX5 417 aa12.22□□□□□ -0.45
SMAD4-205ENST00000588745 TAF3Q5VWG9 929 aa12.22□□□□□ -0.45
SMAD4-205ENST00000588745 TRAF7Q6Q0C0 670 aa12.22□□□□□ -0.45
SMAD4-205ENST00000588745 TMEM270Q6UE05 265 aa12.22□□□□□ -0.45
SMAD4-205ENST00000588745 SCARA5Q6ZMJ2 495 aa12.22□□□□□ -0.45
SMAD4-205ENST00000588745 H2AFVQ71UI9 128 aa12.22□□□□□ -0.45
SMAD4-205ENST00000588745 ZNF677Q86XU0 584 aa12.22□□□□□ -0.45
SMAD4-205ENST00000588745 PALB2Q86YC2 1186 aa12.22□□□□□ -0.45
SMAD4-205ENST00000588745 HACE1Q8IYU2 909 aa12.22□□□□□ -0.45
SMAD4-205ENST00000588745 TMEM130Q8N3G9 435 aa12.22□□□□□ -0.45
SMAD4-205ENST00000588745 USP38Q8NB14 1042 aa12.22□□□□□ -0.45
SMAD4-205ENST00000588745 DDX1Q92499 740 aaKnown RBP12.22□□□□□ -0.45
SMAD4-205ENST00000588745 BCO2Q9BYV7 579 aa12.22□□□□□ -0.45
SMAD4-205ENST00000588745 RNF208Q9H0X6 261 aa12.22□□□□□ -0.45
SMAD4-205ENST00000588745 RNF39Q9H2S5 420 aa12.22□□□□□ -0.45
SMAD4-205ENST00000588745 ACP6Q9NPH0 428 aa12.22□□□□□ -0.45
SMAD4-205ENST00000588745 FAM105AQ9NUU6 356 aa12.22□□□□□ -0.45
SMAD4-205ENST00000588745 TUBGCP4Q9UGJ1 667 aa12.22□□□□□ -0.45
SMAD4-205ENST00000588745 PARP2Q9UGN5 583 aa12.22□□□□□ -0.45
SMAD4-205ENST00000588745 INTUQ9ULD6 942 aa12.22□□□□□ -0.45
SMAD4-205ENST00000588745 AGAP1Q9UPQ3 857 aa12.22□□□□□ -0.45
SMAD4-205ENST00000588745 PCDHB2Q9Y5E7 798 aa12.22□□□□□ -0.45
SMAD4-205ENST00000588745 DUSP10Q9Y6W6 482 aa12.22□□□□□ -0.45
SMAD4-205ENST00000588745 XPOTO43592 962 aaKnown RBP12.21□□□□□ -0.45
SMAD4-205ENST00000588745 MYCP01106 439 aaPredicted RBP12.21□□□□□ -0.45
SMAD4-205ENST00000588745 MMEP08473 750 aa12.21□□□□□ -0.45
SMAD4-205ENST00000588745 P4HA1P13674 534 aa12.21□□□□□ -0.45
SMAD4-205ENST00000588745 ZSCAN20P17040 1043 aaPredicted RBP12.21□□□□□ -0.45
SMAD4-205ENST00000588745 CDK7P50613 346 aa12.21□□□□□ -0.45
SMAD4-205ENST00000588745 DSC3Q14574 896 aa12.21□□□□□ -0.45
SMAD4-205ENST00000588745 FAM126BQ8IXS8 530 aa12.21□□□□□ -0.45
SMAD4-205ENST00000588745 CAGE1Q8TC20 777 aa12.21□□□□□ -0.45
SMAD4-205ENST00000588745 HPDLQ96IR7 371 aa12.21□□□□□ -0.45
SMAD4-205ENST00000588745 PCDHB18PQ96TA0 734 aa12.21□□□□□ -0.45
SMAD4-205ENST00000588745 OSBPL7Q9BZF2 842 aa12.21□□□□□ -0.45
SMAD4-205ENST00000588745 CISHQ9NSE2 258 aa12.21□□□□□ -0.45
SMAD4-205ENST00000588745 KLK14Q9P0G3 267 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms