RNA–Protein interactions for RNA: ENST00000568373.5

SMPD3-211, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,073 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-211ENST00000568373 FAM153AQ9UHL3 310 aa19.37■□□□□ 0.69
SMPD3-211ENST00000568373 PCDHA3Q9Y5H8 950 aa19.37■□□□□ 0.69
SMPD3-211ENST00000568373 COL1A2P08123 1366 aa19.37■□□□□ 0.69
SMPD3-211ENST00000568373 ANK1P16157 1881 aa19.37■□□□□ 0.69
SMPD3-211ENST00000568373 B4GALT4O60513 344 aa19.37■□□□□ 0.69
SMPD3-211ENST00000568373 PPFIA4O75335 1185 aa19.37■□□□□ 0.69
SMPD3-211ENST00000568373 RRM1P23921 792 aa19.37■□□□□ 0.69
SMPD3-211ENST00000568373 GYS2P54840 703 aa19.37■□□□□ 0.69
SMPD3-211ENST00000568373 TFAMQ00059 246 aaKnown RBP19.37■□□□□ 0.69
SMPD3-211ENST00000568373 SGSM1Q2NKQ1 1148 aa19.37■□□□□ 0.69
SMPD3-211ENST00000568373 SPRYD7Q5W111 196 aa19.37■□□□□ 0.69
SMPD3-211ENST00000568373 MON1BQ7L1V2 547 aa19.37■□□□□ 0.69
SMPD3-211ENST00000568373 TSEN2Q8NCE0 465 aaKnown RBP19.37■□□□□ 0.69
SMPD3-211ENST00000568373 C16orf70Q9BSU1 422 aa19.37■□□□□ 0.69
SMPD3-211ENST00000568373 ANAPC7Q9UJX3 599 aa19.37■□□□□ 0.69
SMPD3-211ENST00000568373 ADAM21Q9UKJ8 722 aa19.37■□□□□ 0.69
SMPD3-211ENST00000568373 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.36■□□□□ 0.69
SMPD3-211ENST00000568373 CFHP08603 1231 aa19.36■□□□□ 0.69
SMPD3-211ENST00000568373 TMEM191BP0C7N4 346 aa19.36■□□□□ 0.69
SMPD3-211ENST00000568373 HSPA6P17066 643 aa19.36■□□□□ 0.69
SMPD3-211ENST00000568373 MAPK4P31152 587 aa19.36■□□□□ 0.69
SMPD3-211ENST00000568373 NOMO3P69849 1222 aa19.36■□□□□ 0.69
SMPD3-211ENST00000568373 FAM187BQ17R55 369 aa19.36■□□□□ 0.69
SMPD3-211ENST00000568373 FAM110CQ1W6H9 321 aa19.36■□□□□ 0.69
SMPD3-211ENST00000568373 AADACL2Q6P093 401 aa19.36■□□□□ 0.69
SMPD3-211ENST00000568373 CDR2LQ86X02 465 aaPredicted RBP19.36■□□□□ 0.69
SMPD3-211ENST00000568373 CPNE8Q86YQ8 564 aa19.36■□□□□ 0.69
SMPD3-211ENST00000568373 IFNLR1Q8IU57 520 aaPredicted RBP19.36■□□□□ 0.69
SMPD3-211ENST00000568373 EFCAB13Q8IY85 973 aa19.36■□□□□ 0.69
SMPD3-211ENST00000568373 MREGQ8N565 214 aa19.36■□□□□ 0.69
SMPD3-211ENST00000568373 C2orf69Q8N8R5 385 aa19.36■□□□□ 0.69
SMPD3-211ENST00000568373 CEP120Q8N960 986 aa19.36■□□□□ 0.69
SMPD3-211ENST00000568373 MAML3Q96JK9 1138 aa19.36■□□□□ 0.69
SMPD3-211ENST00000568373 NIF3L1Q9GZT8 377 aa19.36■□□□□ 0.69
SMPD3-211ENST00000568373 TTI1O43156 1089 aa19.36■□□□□ 0.69
SMPD3-211ENST00000568373 THAP12O43422 761 aa19.36■□□□□ 0.69
SMPD3-211ENST00000568373 RNF40O75150 1001 aa19.36■□□□□ 0.69
SMPD3-211ENST00000568373 OSTNP61366 133 aa19.36■□□□□ 0.69
SMPD3-211ENST00000568373 TRPC3Q13507 836 aa19.36■□□□□ 0.69
SMPD3-211ENST00000568373 SEL1L2Q5TEA6 688 aa19.36■□□□□ 0.69
SMPD3-211ENST00000568373 ALS2CLQ60I27 953 aa19.36■□□□□ 0.69
SMPD3-211ENST00000568373 ADAT2Q7Z6V5 191 aaKnown RBP19.36■□□□□ 0.69
SMPD3-211ENST00000568373 ERVK-5Q9HDB9 667 aa19.36■□□□□ 0.69
SMPD3-211ENST00000568373 MROH7Q68CQ1 1323 aa19.35■□□□□ 0.69
SMPD3-211ENST00000568373 A0A087WZ62 844 aa19.35■□□□□ 0.69
SMPD3-211ENST00000568373 TNNC2P02585 160 aa19.35■□□□□ 0.69
SMPD3-211ENST00000568373 ECHS1P30084 290 aa19.35■□□□□ 0.69
SMPD3-211ENST00000568373 GUCY2FP51841 1108 aa19.35■□□□□ 0.69
SMPD3-211ENST00000568373 HLTFQ14527 1009 aaKnown RBP eCLIP19.35■□□□□ 0.69
SMPD3-211ENST00000568373 PPP1R2P3Q6NXS1 205 aa19.35■□□□□ 0.69
SMPD3-211ENST00000568373 PASD1Q8IV76 773 aa19.35■□□□□ 0.69
SMPD3-211ENST00000568373 RIN2Q8WYP3 895 aaPredicted RBP19.35■□□□□ 0.69
SMPD3-211ENST00000568373 SEC14L1Q92503 715 aa19.35■□□□□ 0.69
SMPD3-211ENST00000568373 ANKRD36BP1Q96IX9 119 aa19.35■□□□□ 0.69
SMPD3-211ENST00000568373 VCPIP1Q96JH7 1222 aa19.35■□□□□ 0.69
SMPD3-211ENST00000568373 PTPN18Q99952 460 aa19.35■□□□□ 0.69
SMPD3-211ENST00000568373 FDXACB1Q9BRP7 624 aaPredicted RBP19.35■□□□□ 0.69
SMPD3-211ENST00000568373 CELF4Q9BZC1 486 aaKnown RBP19.35■□□□□ 0.69
SMPD3-211ENST00000568373 RPF1Q9H9Y2 349 aaKnown RBP19.35■□□□□ 0.69
SMPD3-211ENST00000568373 AKT3Q9Y243 479 aa19.35■□□□□ 0.69
SMPD3-211ENST00000568373 MGAMO43451 1857 aa19.35■□□□□ 0.69
SMPD3-211ENST00000568373 H3BRB1 525 aa19.34■□□□□ 0.69
SMPD3-211ENST00000568373 IL18RAPO95256 599 aa19.34■□□□□ 0.69
SMPD3-211ENST00000568373 CELF2O95319 508 aaKnown RBP19.34■□□□□ 0.69
SMPD3-211ENST00000568373 PYGMP11217 842 aa19.34■□□□□ 0.69
SMPD3-211ENST00000568373 TMOD1P28289 359 aa19.34■□□□□ 0.69
SMPD3-211ENST00000568373 AMHR2Q16671 573 aa19.34■□□□□ 0.69
SMPD3-211ENST00000568373 DUSP28Q4G0W2 176 aa19.34■□□□□ 0.69
SMPD3-211ENST00000568373 ZNF771Q7L3S4 317 aaPredicted RBP19.34■□□□□ 0.69
SMPD3-211ENST00000568373 PLEKHH3Q7Z736 793 aa19.34■□□□□ 0.69
SMPD3-211ENST00000568373 PHF13Q86YI8 300 aaPredicted RBP19.34■□□□□ 0.69
SMPD3-211ENST00000568373 TUT1Q9H6E5 874 aaKnown RBP19.34■□□□□ 0.69
SMPD3-211ENST00000568373 GPR25O00155 361 aa19.34■□□□□ 0.69
SMPD3-211ENST00000568373 CXCL8P10145 99 aa19.34■□□□□ 0.69
SMPD3-211ENST00000568373 HOXD8P13378 290 aaPredicted RBP19.34■□□□□ 0.69
SMPD3-211ENST00000568373 SMPD1P17405 629 aa19.34■□□□□ 0.69
SMPD3-211ENST00000568373 RWDD2BP57060 319 aa19.34■□□□□ 0.69
SMPD3-211ENST00000568373 ZNF699Q32M78 642 aa19.34■□□□□ 0.69
SMPD3-211ENST00000568373 C2CD6Q53TS8 623 aa19.34■□□□□ 0.69
SMPD3-211ENST00000568373 LIN9Q5TKA1 542 aa19.34■□□□□ 0.69
SMPD3-211ENST00000568373 ZNF606Q8WXB4 792 aa19.34■□□□□ 0.69
SMPD3-211ENST00000568373 EXOC4Q96A65 974 aa19.34■□□□□ 0.69
SMPD3-211ENST00000568373 TINF2Q9BSI4 451 aa19.34■□□□□ 0.69
SMPD3-211ENST00000568373 TRIM7Q9C029 511 aa19.34■□□□□ 0.69
SMPD3-211ENST00000568373 XYLT2Q9H1B5 865 aa19.34■□□□□ 0.69
SMPD3-211ENST00000568373 ABHD16BQ9H3Z7 469 aa19.34■□□□□ 0.69
SMPD3-211ENST00000568373 CISHQ9NSE2 258 aa19.34■□□□□ 0.69
SMPD3-211ENST00000568373 ADAM22Q9P0K1 906 aa19.34■□□□□ 0.69
SMPD3-211ENST00000568373 UTP11Q9Y3A2 253 aaKnown RBP19.34■□□□□ 0.69
SMPD3-211ENST00000568373 HSF2BPO75031 334 aa19.33■□□□□ 0.69
SMPD3-211ENST00000568373 VTNP04004 478 aa19.33■□□□□ 0.69
SMPD3-211ENST00000568373 MTHFD1LQ6UB35 978 aa19.33■□□□□ 0.69
SMPD3-211ENST00000568373 DDX42Q86XP3 938 aaKnown RBP eCLIP19.33■□□□□ 0.69
SMPD3-211ENST00000568373 TMEM192Q8IY95 271 aa19.33■□□□□ 0.69
SMPD3-211ENST00000568373 C11orf70Q9BRQ4 267 aa19.33■□□□□ 0.69
SMPD3-211ENST00000568373 SLTMQ9NWH9 1034 aaKnown RBP eCLIP19.33■□□□□ 0.69
SMPD3-211ENST00000568373 MYO1FO00160 1098 aa19.32■□□□□ 0.68
SMPD3-211ENST00000568373 PHF2O75151 1096 aa19.32■□□□□ 0.68
SMPD3-211ENST00000568373 CSDE1O75534 798 aaKnown RBP19.32■□□□□ 0.68
SMPD3-211ENST00000568373 MMP3P08254 477 aa19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms