RNA–Protein interactions for RNA: ENST00000551320.1

PRPF40B-214, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-214ENST00000551320 SLC44A4Q53GD3 710 aa7.54□□□□□ -1.2
PRPF40B-214ENST00000551320 TANGO2Q6ICL3 276 aa7.54□□□□□ -1.2
PRPF40B-214ENST00000551320 C1orf210Q8IVY1 113 aa7.54□□□□□ -1.2
PRPF40B-214ENST00000551320 CCDC83Q8IWF9 413 aa7.54□□□□□ -1.2
PRPF40B-214ENST00000551320 SLFN12Q8IYM2 578 aa7.54□□□□□ -1.2
PRPF40B-214ENST00000551320 EHBP1Q8NDI1 1231 aa7.54□□□□□ -1.2
PRPF40B-214ENST00000551320 PJA1Q8NG27 643 aa7.54□□□□□ -1.2
PRPF40B-214ENST00000551320 GTF3C6Q969F1 213 aa7.54□□□□□ -1.2
PRPF40B-214ENST00000551320 ZSWIM3Q96MP5 696 aa7.54□□□□□ -1.2
PRPF40B-214ENST00000551320 ZMAT2Q96NC0 199 aaKnown RBP7.54□□□□□ -1.2
PRPF40B-214ENST00000551320 UCN2Q96RP3 112 aa7.54□□□□□ -1.2
PRPF40B-214ENST00000551320 RTP3Q9BQQ7 232 aa7.54□□□□□ -1.2
PRPF40B-214ENST00000551320 CCDC113Q9H0I3 377 aa7.54□□□□□ -1.2
PRPF40B-214ENST00000551320 FZD8Q9H461 694 aa7.54□□□□□ -1.2
PRPF40B-214ENST00000551320 HEBP1Q9NRV9 189 aa7.54□□□□□ -1.2
PRPF40B-214ENST00000551320 ANKEF1Q9NU02 776 aa7.54□□□□□ -1.2
PRPF40B-214ENST00000551320 SPATA6Q9NWH7 488 aaPredicted RBP7.54□□□□□ -1.2
PRPF40B-214ENST00000551320 FBXW11Q9UKB1 542 aa7.54□□□□□ -1.2
PRPF40B-214ENST00000551320 NDRG2Q9UN36 371 aaKnown RBP7.54□□□□□ -1.2
PRPF40B-214ENST00000551320 CDY1Q9Y6F8 540 aa7.54□□□□□ -1.2
PRPF40B-214ENST00000551320 STK36Q9NRP7 1315 aa7.53□□□□□ -1.2
PRPF40B-214ENST00000551320 MTCL1Q9Y4B5 1905 aaKnown RBP7.53□□□□□ -1.2
PRPF40B-214ENST00000551320 NPHP3-ACAD11A0A0J9YXS1 232 aa7.53□□□□□ -1.2
PRPF40B-214ENST00000551320 ARHGEF35A5YM69 484 aa7.53□□□□□ -1.2
PRPF40B-214ENST00000551320 E9PMD0 336 aa7.53□□□□□ -1.2
PRPF40B-214ENST00000551320 DKC1O60832 514 aaKnown RBP eCLIP7.53□□□□□ -1.2
PRPF40B-214ENST00000551320 SOAT2O75908 522 aa7.53□□□□□ -1.2
PRPF40B-214ENST00000551320 CDKL5O76039 1030 aa7.53□□□□□ -1.2
PRPF40B-214ENST00000551320 B3GAT3O94766 335 aa7.53□□□□□ -1.2
PRPF40B-214ENST00000551320 LYPLA2O95372 231 aa7.53□□□□□ -1.2
PRPF40B-214ENST00000551320 LMNAP02545 664 aaKnown RBP7.53□□□□□ -1.2
PRPF40B-214ENST00000551320 THP07101 528 aa7.53□□□□□ -1.2
PRPF40B-214ENST00000551320 OR4Q2P0C623 313 aa7.53□□□□□ -1.2
PRPF40B-214ENST00000551320 TARSP26639 723 aaKnown RBP7.53□□□□□ -1.2
PRPF40B-214ENST00000551320 AXLP30530 894 aa7.53□□□□□ -1.2
PRPF40B-214ENST00000551320 VIPR2P41587 438 aa7.53□□□□□ -1.2
PRPF40B-214ENST00000551320 NCBP1Q09161 790 aaKnown RBP7.53□□□□□ -1.2
PRPF40B-214ENST00000551320 SRSF5Q13243 272 aaKnown RBP7.53□□□□□ -1.2
PRPF40B-214ENST00000551320 IL17AQ16552 155 aa7.53□□□□□ -1.2
PRPF40B-214ENST00000551320 LIN9Q5TKA1 542 aa7.53□□□□□ -1.2
PRPF40B-214ENST00000551320 TAS1R3Q7RTX0 852 aa7.53□□□□□ -1.2
PRPF40B-214ENST00000551320 KCNK18Q7Z418 384 aa7.53□□□□□ -1.2
PRPF40B-214ENST00000551320 NPAS3Q8IXF0 933 aa7.53□□□□□ -1.2
PRPF40B-214ENST00000551320 CNNM3Q8NE01 707 aa7.53□□□□□ -1.2
PRPF40B-214ENST00000551320 DEPTORQ8TB45 409 aa7.53□□□□□ -1.2
PRPF40B-214ENST00000551320 ZNF592Q92610 1267 aa7.53□□□□□ -1.2
PRPF40B-214ENST00000551320 STAMQ92783 540 aa7.53□□□□□ -1.2
PRPF40B-214ENST00000551320 CORO1BQ9BR76 489 aa7.53□□□□□ -1.2
PRPF40B-214ENST00000551320 TARS2Q9BW92 718 aaKnown RBP7.53□□□□□ -1.2
PRPF40B-214ENST00000551320 UBN1Q9NPG3 1134 aa7.53□□□□□ -1.2
PRPF40B-214ENST00000551320 C2orf42Q9NWW7 574 aa7.53□□□□□ -1.2
PRPF40B-214ENST00000551320 FNIP2Q9P278 1114 aa7.53□□□□□ -1.2
PRPF40B-214ENST00000551320 CDH7Q9ULB5 785 aa7.53□□□□□ -1.2
PRPF40B-214ENST00000551320 TIMM13Q9Y5L4 95 aaPredicted RBP7.53□□□□□ -1.2
PRPF40B-214ENST00000551320 SF3B1O75533 1304 aaKnown RBP eCLIP7.52□□□□□ -1.2
PRPF40B-214ENST00000551320 F5P12259 2224 aa7.52□□□□□ -1.2
PRPF40B-214ENST00000551320 FRYQ5TBA9 3013 aa7.52□□□□□ -1.21
PRPF40B-214ENST00000551320 DCDC2BA2VCK2 349 aa7.52□□□□□ -1.21
PRPF40B-214ENST00000551320 CCDC169A6NNP5 214 aa7.52□□□□□ -1.21
PRPF40B-214ENST00000551320 KRT37O76014 449 aa7.52□□□□□ -1.21
PRPF40B-214ENST00000551320 RHOP08100 348 aa7.52□□□□□ -1.21
PRPF40B-214ENST00000551320 XBP1P17861 261 aa7.52□□□□□ -1.21
PRPF40B-214ENST00000551320 CYP11B2P19099 503 aa7.52□□□□□ -1.21
PRPF40B-214ENST00000551320 CCT6AP40227 531 aaKnown RBP7.52□□□□□ -1.21
PRPF40B-214ENST00000551320 SOX9P48436 509 aa7.52□□□□□ -1.21
PRPF40B-214ENST00000551320 PEX3P56589 373 aa7.52□□□□□ -1.21
PRPF40B-214ENST00000551320 MCCD1P59942 119 aaPredicted RBP7.52□□□□□ -1.21
PRPF40B-214ENST00000551320 DMWDQ09019 674 aa7.52□□□□□ -1.21
PRPF40B-214ENST00000551320 MLF2Q15773 248 aaPredicted RBP7.52□□□□□ -1.21
PRPF40B-214ENST00000551320 RSPO4Q2I0M5 234 aaPredicted RBP7.52□□□□□ -1.21
PRPF40B-214ENST00000551320 PABPC1LQ4VXU2 614 aaKnown RBP7.52□□□□□ -1.21
PRPF40B-214ENST00000551320 STXBP5Q5T5C0 1151 aa7.52□□□□□ -1.21
PRPF40B-214ENST00000551320 ATF7IP2Q5U623 682 aa7.52□□□□□ -1.21
PRPF40B-214ENST00000551320 CDCA2Q69YH5 1023 aaPredicted RBP7.52□□□□□ -1.21
PRPF40B-214ENST00000551320 TPRG1Q6ZUI0 275 aa7.52□□□□□ -1.21
PRPF40B-214ENST00000551320 DAW1Q8N136 415 aa7.52□□□□□ -1.21
PRPF40B-214ENST00000551320 SUMF1Q8NBK3 374 aa7.52□□□□□ -1.21
PRPF40B-214ENST00000551320 FAM174AQ8TBP5 190 aa7.52□□□□□ -1.21
PRPF40B-214ENST00000551320 PIK3R5Q8WYR1 880 aa7.52□□□□□ -1.21
PRPF40B-214ENST00000551320 RSPRY1Q96DX4 576 aa7.52□□□□□ -1.21
PRPF40B-214ENST00000551320 CCDC51Q96ER9 411 aa7.52□□□□□ -1.21
PRPF40B-214ENST00000551320 FAM84AQ96KN4 292 aa7.52□□□□□ -1.21
PRPF40B-214ENST00000551320 PPP1R10Q96QC0 940 aaKnown RBP7.52□□□□□ -1.21
PRPF40B-214ENST00000551320 RUSC1Q9BVN2 902 aa7.52□□□□□ -1.21
PRPF40B-214ENST00000551320 IRF2BPLQ9H1B7 796 aa7.52□□□□□ -1.21
PRPF40B-214ENST00000551320 BHMT2Q9H2M3 363 aa7.52□□□□□ -1.21
PRPF40B-214ENST00000551320 IKZF4Q9H2S9 585 aa7.52□□□□□ -1.21
PRPF40B-214ENST00000551320 PLEKHA4Q9H4M7 779 aa7.52□□□□□ -1.21
PRPF40B-214ENST00000551320 PRMT7Q9NVM4 692 aaPredicted RBP7.52□□□□□ -1.21
PRPF40B-214ENST00000551320 POLR3BQ9NW08 1133 aaPredicted RBP7.52□□□□□ -1.21
PRPF40B-214ENST00000551320 ZDHHC7Q9NXF8 308 aa7.52□□□□□ -1.21
PRPF40B-214ENST00000551320 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.52□□□□□ -1.21
PRPF40B-214ENST00000551320 KIAA1024Q9UPX6 916 aa7.52□□□□□ -1.21
PRPF40B-214ENST00000551320 MRPS23Q9Y3D9 190 aaKnown RBP7.52□□□□□ -1.21
PRPF40B-214ENST00000551320 LAMA1P25391 3075 aa7.52□□□□□ -1.21
PRPF40B-214ENST00000551320 ACACBO00763 2458 aa7.52□□□□□ -1.21
PRPF40B-214ENST00000551320 SMIM28A0A1B0GU29 152 aa7.51□□□□□ -1.21
PRPF40B-214ENST00000551320 KANSL1LA0AUZ9 987 aa7.51□□□□□ -1.21
PRPF40B-214ENST00000551320 WDR27A2RRH5 827 aa7.51□□□□□ -1.21
PRPF40B-214ENST00000551320 ACKR2O00590 384 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms