RNA–Protein interactions for RNA: ENST00000551111.1

PRPF40B-212, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-212ENST00000551111 TBC1D32Q96NH3 1257 aa12.63□□□□□ -0.39
PRPF40B-212ENST00000551111 CRISPLD1Q9H336 500 aa12.63□□□□□ -0.39
PRPF40B-212ENST00000551111 CYP4F11Q9HBI6 524 aa12.63□□□□□ -0.39
PRPF40B-212ENST00000551111 TOPORSQ9NS56 1045 aaPredicted RBP12.63□□□□□ -0.39
PRPF40B-212ENST00000551111 CEP72Q9P209 647 aa12.63□□□□□ -0.39
PRPF40B-212ENST00000551111 KCNH3Q9ULD8 1083 aa12.63□□□□□ -0.39
PRPF40B-212ENST00000551111 RBM19Q9Y4C8 960 aaKnown RBP12.63□□□□□ -0.39
PRPF40B-212ENST00000551111 CACNA1AO00555 2505 aa12.62□□□□□ -0.39
PRPF40B-212ENST00000551111 OBSL1O75147 1896 aa12.62□□□□□ -0.39
PRPF40B-212ENST00000551111 PRRG1O14668 218 aa12.62□□□□□ -0.39
PRPF40B-212ENST00000551111 PPEF2O14830 753 aa12.62□□□□□ -0.39
PRPF40B-212ENST00000551111 OR4Q2P0C623 313 aa12.62□□□□□ -0.39
PRPF40B-212ENST00000551111 PLA2G4BP0C869 781 aa12.62□□□□□ -0.39
PRPF40B-212ENST00000551111 PLS3P13797 630 aa12.62□□□□□ -0.39
PRPF40B-212ENST00000551111 ATF2P15336 505 aa12.62□□□□□ -0.39
PRPF40B-212ENST00000551111 PTPN2P17706 415 aa12.62□□□□□ -0.39
PRPF40B-212ENST00000551111 TARSP26639 723 aaKnown RBP12.62□□□□□ -0.39
PRPF40B-212ENST00000551111 GRM2Q14416 872 aa12.62□□□□□ -0.39
PRPF40B-212ENST00000551111 NOLC1Q14978 699 aaKnown RBP eCLIP12.62□□□□□ -0.39
PRPF40B-212ENST00000551111 UBXN2BQ14CS0 331 aa12.62□□□□□ -0.39
PRPF40B-212ENST00000551111 CTXN3Q4LDR2 81 aa12.62□□□□□ -0.39
PRPF40B-212ENST00000551111 TMEM119Q4V9L6 283 aa12.62□□□□□ -0.39
PRPF40B-212ENST00000551111 FAM78AQ5JUQ0 283 aa12.62□□□□□ -0.39
PRPF40B-212ENST00000551111 RNF19BQ6ZMZ0 732 aa12.62□□□□□ -0.39
PRPF40B-212ENST00000551111 GPIHBP1Q8IV16 184 aa12.62□□□□□ -0.39
PRPF40B-212ENST00000551111 TCEAL8Q8IYN2 117 aa12.62□□□□□ -0.39
PRPF40B-212ENST00000551111 SPIRE2Q8WWL2 714 aa12.62□□□□□ -0.39
PRPF40B-212ENST00000551111 DDX12PQ92771 950 aa12.62□□□□□ -0.39
PRPF40B-212ENST00000551111 TMX3Q96JJ7 454 aa12.62□□□□□ -0.39
PRPF40B-212ENST00000551111 RAB34Q9BZG1 259 aa12.62□□□□□ -0.39
PRPF40B-212ENST00000551111 LTB4R2Q9NPC1 389 aa12.62□□□□□ -0.39
PRPF40B-212ENST00000551111 HEBP1Q9NRV9 189 aa12.62□□□□□ -0.39
PRPF40B-212ENST00000551111 NUB1Q9Y5A7 615 aa12.62□□□□□ -0.39
PRPF40B-212ENST00000551111 INSL5Q9Y5Q6 135 aa12.62□□□□□ -0.39
PRPF40B-212ENST00000551111 SDK1Q7Z5N4 2213 aa12.62□□□□□ -0.39
PRPF40B-212ENST00000551111 NUP210Q8TEM1 1887 aaPredicted RBP12.61□□□□□ -0.39
PRPF40B-212ENST00000551111 SPTBN2O15020 2390 aa12.61□□□□□ -0.39
PRPF40B-212ENST00000551111 TTC26A0AVF1 554 aa12.61□□□□□ -0.39
PRPF40B-212ENST00000551111 LACTBL1A8MY62 500 aa12.61□□□□□ -0.39
PRPF40B-212ENST00000551111 LAD1O00515 517 aa12.61□□□□□ -0.39
PRPF40B-212ENST00000551111 SYN3O14994 580 aa12.61□□□□□ -0.39
PRPF40B-212ENST00000551111 FAM189A1O60320 539 aa12.61□□□□□ -0.39
PRPF40B-212ENST00000551111 TOM1L1O75674 476 aa12.61□□□□□ -0.39
PRPF40B-212ENST00000551111 LMNAP02545 664 aaKnown RBP12.61□□□□□ -0.39
PRPF40B-212ENST00000551111 LRG1P02750 347 aa12.61□□□□□ -0.39
PRPF40B-212ENST00000551111 GJB2P29033 226 aa12.61□□□□□ -0.39
PRPF40B-212ENST00000551111 ELF1P32519 619 aa12.61□□□□□ -0.39
PRPF40B-212ENST00000551111 RPL9P32969 192 aaKnown RBP12.61□□□□□ -0.39
PRPF40B-212ENST00000551111 MCM4P33991 863 aa12.61□□□□□ -0.39
PRPF40B-212ENST00000551111 MCL1Q07820 350 aa12.61□□□□□ -0.39
PRPF40B-212ENST00000551111 ADCY1Q08828 1119 aa12.61□□□□□ -0.39
PRPF40B-212ENST00000551111 DHX8Q14562 1220 aaKnown RBP12.61□□□□□ -0.39
PRPF40B-212ENST00000551111 ZBTB6Q15916 424 aa12.61□□□□□ -0.39
PRPF40B-212ENST00000551111 TSSK4Q6SA08 328 aa12.61□□□□□ -0.39
PRPF40B-212ENST00000551111 TPRG1Q6ZUI0 275 aa12.61□□□□□ -0.39
PRPF40B-212ENST00000551111 APBB1IPQ7Z5R6 666 aaPredicted RBP12.61□□□□□ -0.39
PRPF40B-212ENST00000551111 KIAA2013Q8IYS2 634 aa12.61□□□□□ -0.39
PRPF40B-212ENST00000551111 SUMF1Q8NBK3 374 aa12.61□□□□□ -0.39
PRPF40B-212ENST00000551111 IKZF4Q9H2S9 585 aa12.61□□□□□ -0.39
PRPF40B-212ENST00000551111 C17orf75Q9HAS0 396 aa12.61□□□□□ -0.39
PRPF40B-212ENST00000551111 AVENQ9NQS1 362 aaPredicted RBP12.61□□□□□ -0.39
PRPF40B-212ENST00000551111 BLOC1S4Q9NUP1 217 aa12.61□□□□□ -0.39
PRPF40B-212ENST00000551111 SLC38A7Q9NVC3 462 aa12.61□□□□□ -0.39
PRPF40B-212ENST00000551111 ECI2O75521 394 aa12.6□□□□□ -0.39
PRPF40B-212ENST00000551111 VIPR2P41587 438 aa12.6□□□□□ -0.39
PRPF40B-212ENST00000551111 ID4P47928 161 aa12.6□□□□□ -0.39
PRPF40B-212ENST00000551111 PRKCQQ04759 706 aa12.6□□□□□ -0.39
PRPF40B-212ENST00000551111 TWF1Q12792 350 aa12.6□□□□□ -0.39
PRPF40B-212ENST00000551111 STRN3Q13033 797 aa12.6□□□□□ -0.39
PRPF40B-212ENST00000551111 ENOX2Q16206 610 aaKnown RBP12.6□□□□□ -0.39
PRPF40B-212ENST00000551111 SLC39A4Q6P5W5 647 aa12.6□□□□□ -0.39
PRPF40B-212ENST00000551111 VITQ6UXI7 678 aa12.6□□□□□ -0.39
PRPF40B-212ENST00000551111 RTL10Q7L3V2 364 aa12.6□□□□□ -0.39
PRPF40B-212ENST00000551111 HAUS6Q7Z4H7 955 aa12.6□□□□□ -0.39
PRPF40B-212ENST00000551111 ZNF687Q8N1G0 1237 aa12.6□□□□□ -0.39
PRPF40B-212ENST00000551111 TTC9BQ8N6N2 239 aa12.6□□□□□ -0.39
PRPF40B-212ENST00000551111 RMDN1Q96DB5 314 aa12.6□□□□□ -0.39
PRPF40B-212ENST00000551111 RSPRY1Q96DX4 576 aa12.6□□□□□ -0.39
PRPF40B-212ENST00000551111 SHDQ96IW2 340 aa12.6□□□□□ -0.39
PRPF40B-212ENST00000551111 ASB16Q96NS5 453 aa12.6□□□□□ -0.39
PRPF40B-212ENST00000551111 PGLYRP2Q96PD5 576 aa12.6□□□□□ -0.39
PRPF40B-212ENST00000551111 TMEM209Q96SK2 561 aa12.6□□□□□ -0.39
PRPF40B-212ENST00000551111 REEP2Q9BRK0 252 aa12.6□□□□□ -0.39
PRPF40B-212ENST00000551111 SPATA6Q9NWH7 488 aaPredicted RBP12.6□□□□□ -0.39
PRPF40B-212ENST00000551111 GDE1Q9NZC3 331 aa12.6□□□□□ -0.39
PRPF40B-212ENST00000551111 PCDHB8Q9UN66 801 aa12.6□□□□□ -0.39
PRPF40B-212ENST00000551111 STK24Q9Y6E0 443 aa12.6□□□□□ -0.39
PRPF40B-212ENST00000551111 TISP43B9A030 160 aa12.59□□□□□ -0.39
PRPF40B-212ENST00000551111 H7C4K7 107 aa12.59□□□□□ -0.39
PRPF40B-212ENST00000551111 M0QZQ0 153 aa12.59□□□□□ -0.39
PRPF40B-212ENST00000551111 CLDN3O15551 220 aa12.59□□□□□ -0.39
PRPF40B-212ENST00000551111 EIF5BO60841 1220 aaKnown RBP12.59□□□□□ -0.39
PRPF40B-212ENST00000551111 MYL4P12829 197 aa12.59□□□□□ -0.39
PRPF40B-212ENST00000551111 MATR3P43243 847 aaKnown RBP eCLIP12.59□□□□□ -0.39
PRPF40B-212ENST00000551111 NCKAP1LP55160 1127 aa12.59□□□□□ -0.39
PRPF40B-212ENST00000551111 CSTF1Q05048 431 aaKnown RBP12.59□□□□□ -0.39
PRPF40B-212ENST00000551111 MCM6Q14566 821 aa12.59□□□□□ -0.39
PRPF40B-212ENST00000551111 RILPL1Q5EBL4 403 aa12.59□□□□□ -0.39
PRPF40B-212ENST00000551111 ZPBP2Q6X784 338 aa12.59□□□□□ -0.39
PRPF40B-212ENST00000551111 CLDN23Q96B33 292 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms