RNA–Protein interactions for RNA: ENST00000540763.5

DDX55-207, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 799 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-207ENST00000540763 TNNC2P02585 160 aa21■□□□□ 0.95
DDX55-207ENST00000540763 PNPLA4P41247 253 aa21■□□□□ 0.95
DDX55-207ENST00000540763 AARSP49588 968 aaKnown RBP eCLIP21■□□□□ 0.95
DDX55-207ENST00000540763 NLRP12P59046 1061 aa21■□□□□ 0.95
DDX55-207ENST00000540763 ERVFC1P60507 584 aa21■□□□□ 0.95
DDX55-207ENST00000540763 DSG1Q02413 1049 aa21■□□□□ 0.95
DDX55-207ENST00000540763 USP41Q3LFD5 358 aa21■□□□□ 0.95
DDX55-207ENST00000540763 KLHL10Q6JEL2 608 aa21■□□□□ 0.95
DDX55-207ENST00000540763 PDZRN4Q6ZMN7 1036 aaPredicted RBP21■□□□□ 0.95
DDX55-207ENST00000540763 TMC7Q7Z402 723 aa21■□□□□ 0.95
DDX55-207ENST00000540763 FAM186BQ8IYM0 893 aa21■□□□□ 0.95
DDX55-207ENST00000540763 RABGGTAQ92696 567 aa21■□□□□ 0.95
DDX55-207ENST00000540763 ZNF560Q96MR9 790 aa21■□□□□ 0.95
DDX55-207ENST00000540763 GPR62Q9BZJ7 368 aa21■□□□□ 0.95
DDX55-207ENST00000540763 RWDD2AQ9UIY3 292 aa21■□□□□ 0.95
DDX55-207ENST00000540763 CTNND2Q9UQB3 1225 aa21■□□□□ 0.95
DDX55-207ENST00000540763 NUB1Q9Y5A7 615 aa21■□□□□ 0.95
DDX55-207ENST00000540763 URODP06132 367 aa20.99■□□□□ 0.95
DDX55-207ENST00000540763 DLATP10515 647 aaKnown RBP20.99■□□□□ 0.95
DDX55-207ENST00000540763 EPB41P11171 864 aaKnown RBP20.99■□□□□ 0.95
DDX55-207ENST00000540763 IRS1P35568 1242 aa20.99■□□□□ 0.95
DDX55-207ENST00000540763 GLUD2P49448 558 aa20.99■□□□□ 0.95
DDX55-207ENST00000540763 PDXDC1Q6P996 788 aa20.99■□□□□ 0.95
DDX55-207ENST00000540763 LRRC52Q8N7C0 313 aa20.99■□□□□ 0.95
DDX55-207ENST00000540763 C1orf127Q8N9H9 656 aa20.99■□□□□ 0.95
DDX55-207ENST00000540763 HASPINQ8TF76 798 aa20.99■□□□□ 0.95
DDX55-207ENST00000540763 SUSD3Q96L08 255 aa20.99■□□□□ 0.95
DDX55-207ENST00000540763 MTMR12Q9C0I1 747 aa20.99■□□□□ 0.95
DDX55-207ENST00000540763 GZF1Q9H116 711 aaPredicted RBP20.99■□□□□ 0.95
DDX55-207ENST00000540763 PRDM6Q9NQX0 595 aa20.99■□□□□ 0.95
DDX55-207ENST00000540763 TMEM63CQ9P1W3 806 aa20.99■□□□□ 0.95
DDX55-207ENST00000540763 PTPRJQ12913 1337 aa20.99■□□□□ 0.95
DDX55-207ENST00000540763 ARHGEF37A1IGU5 675 aa20.98■□□□□ 0.95
DDX55-207ENST00000540763 IKBKBO14920 756 aa20.98■□□□□ 0.95
DDX55-207ENST00000540763 SYN3O14994 580 aa20.98■□□□□ 0.95
DDX55-207ENST00000540763 KRT13P13646 458 aa20.98■□□□□ 0.95
DDX55-207ENST00000540763 TNNI1P19237 187 aa20.98■□□□□ 0.95
DDX55-207ENST00000540763 FGFR3P22607 806 aa20.98■□□□□ 0.95
DDX55-207ENST00000540763 GUCY2FP51841 1108 aa20.98■□□□□ 0.95
DDX55-207ENST00000540763 CREMQ03060 361 aa20.98■□□□□ 0.95
DDX55-207ENST00000540763 BFSP1Q12934 665 aa20.98■□□□□ 0.95
DDX55-207ENST00000540763 PTPN14Q15678 1187 aa20.98■□□□□ 0.95
DDX55-207ENST00000540763 SKOR2Q2VWA4 1001 aaPredicted RBP20.98■□□□□ 0.95
DDX55-207ENST00000540763 PLPP4Q5VZY2 271 aa20.98■□□□□ 0.95
DDX55-207ENST00000540763 MRPL43Q8N983 215 aaKnown RBP20.98■□□□□ 0.95
DDX55-207ENST00000540763 CXorf38Q8TB03 319 aa20.98■□□□□ 0.95
DDX55-207ENST00000540763 PLEKHO2Q8TD55 490 aa20.98■□□□□ 0.95
DDX55-207ENST00000540763 MICAL1Q8TDZ2 1067 aa20.98■□□□□ 0.95
DDX55-207ENST00000540763 CCDC127Q96BQ5 260 aa20.98■□□□□ 0.95
DDX55-207ENST00000540763 CDCA3Q99618 268 aaPredicted RBP20.98■□□□□ 0.95
DDX55-207ENST00000540763 DUSP9Q99956 384 aaKnown RBP20.98■□□□□ 0.95
DDX55-207ENST00000540763 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP20.98■□□□□ 0.95
DDX55-207ENST00000540763 MRPL17Q9NRX2 175 aaKnown RBP20.98■□□□□ 0.95
DDX55-207ENST00000540763 MYO7AQ13402 2215 aa20.98■□□□□ 0.95
DDX55-207ENST00000540763 NCOR1O75376 2440 aa20.97■□□□□ 0.95
DDX55-207ENST00000540763 C2orf71A6NGG8 1288 aa20.97■□□□□ 0.95
DDX55-207ENST00000540763 LRRIQ3A6PVS8 624 aaPredicted RBP20.97■□□□□ 0.95
DDX55-207ENST00000540763 M0QZQ0 153 aa20.97■□□□□ 0.95
DDX55-207ENST00000540763 NCK2O43639 380 aa20.97■□□□□ 0.95
DDX55-207ENST00000540763 ERCC5P28715 1186 aaPredicted RBP20.97■□□□□ 0.95
DDX55-207ENST00000540763 TAF6P49848 677 aa20.97■□□□□ 0.95
DDX55-207ENST00000540763 VAMP7P51809 220 aa20.97■□□□□ 0.95
DDX55-207ENST00000540763 LILRA4P59901 499 aa20.97■□□□□ 0.95
DDX55-207ENST00000540763 DPCR1Q3MIW9 517 aa20.97■□□□□ 0.95
DDX55-207ENST00000540763 FAM171A1Q5VUB5 890 aa20.97■□□□□ 0.95
DDX55-207ENST00000540763 KIAA0319Q5VV43 1072 aa20.97■□□□□ 0.95
DDX55-207ENST00000540763 FILIP1Q7Z7B0 1213 aa20.97■□□□□ 0.95
DDX55-207ENST00000540763 OR5B17Q8NGF7 314 aa20.97■□□□□ 0.95
DDX55-207ENST00000540763 ATXN2LQ8WWM7 1075 aaKnown RBP20.97■□□□□ 0.95
DDX55-207ENST00000540763 PIK3R5Q8WYR1 880 aa20.97■□□□□ 0.95
DDX55-207ENST00000540763 BORCS6Q96GS4 357 aa20.97■□□□□ 0.95
DDX55-207ENST00000540763 TTPALQ9BTX7 342 aa20.97■□□□□ 0.95
DDX55-207ENST00000540763 THEGQ9P2T0 379 aa20.97■□□□□ 0.95
DDX55-207ENST00000540763 MTCL1Q9Y4B5 1905 aaKnown RBP20.96■□□□□ 0.95
DDX55-207ENST00000540763 LILRB3O75022 631 aa20.96■□□□□ 0.95
DDX55-207ENST00000540763 FGFR1OPO95684 399 aaKnown RBP20.96■□□□□ 0.95
DDX55-207ENST00000540763 ITGB3P05106 788 aa20.96■□□□□ 0.95
DDX55-207ENST00000540763 BRCC3P46736 316 aa20.96■□□□□ 0.95
DDX55-207ENST00000540763 RBP5P82980 135 aa20.96■□□□□ 0.95
DDX55-207ENST00000540763 SV2CQ496J9 727 aa20.96■□□□□ 0.95
DDX55-207ENST00000540763 TCEAL5Q5H9L2 206 aa20.96■□□□□ 0.95
DDX55-207ENST00000540763 LMBRD2Q68DH5 695 aaPredicted RBP20.96■□□□□ 0.95
DDX55-207ENST00000540763 KIAA1841Q6NSI8 718 aa20.96■□□□□ 0.95
DDX55-207ENST00000540763 CAVIN1Q6NZI2 390 aaKnown RBP20.96■□□□□ 0.95
DDX55-207ENST00000540763 SASS6Q6UVJ0 657 aa20.96■□□□□ 0.95
DDX55-207ENST00000540763 TRAPPC11Q7Z392 1133 aa20.96■□□□□ 0.95
DDX55-207ENST00000540763 CSGALNACT2Q8N6G5 542 aa20.96■□□□□ 0.95
DDX55-207ENST00000540763 METTL14Q9HCE5 456 aaKnown RBP20.96■□□□□ 0.95
DDX55-207ENST00000540763 FNIP2Q9P278 1114 aa20.96■□□□□ 0.95
DDX55-207ENST00000540763 SIX4Q9UIU6 781 aa20.96■□□□□ 0.95
DDX55-207ENST00000540763 PCDHB8Q9UN66 801 aa20.96■□□□□ 0.95
DDX55-207ENST00000540763 PLXNA3P51805 1871 aa20.95■□□□□ 0.94
DDX55-207ENST00000540763 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP20.95■□□□□ 0.94
DDX55-207ENST00000540763 PPEF2O14830 753 aa20.95■□□□□ 0.94
DDX55-207ENST00000540763 CXCL14O95715 111 aa20.95■□□□□ 0.94
DDX55-207ENST00000540763 GNA14O95837 355 aa20.95■□□□□ 0.94
DDX55-207ENST00000540763 C1RP00736 705 aa20.95■□□□□ 0.94
DDX55-207ENST00000540763 POLR2BP30876 1174 aaKnown RBP20.95■□□□□ 0.94
DDX55-207ENST00000540763 COL19A1Q14993 1142 aa20.95■□□□□ 0.94
DDX55-207ENST00000540763 TAS1R1Q7RTX1 841 aa20.95■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms