RNA–Protein interactions for RNA: ENST00000530279.5

C11orf54-208, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 4

Gene C11orf54, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-208ENST00000530279 PYGMP11217 842 aa4.63□□□□□ -1.67
C11orf54-208ENST00000530279 ATP5JP18859 108 aa4.63□□□□□ -1.67
C11orf54-208ENST00000530279 PRDX5P30044 214 aa4.63□□□□□ -1.67
C11orf54-208ENST00000530279 ADORA1P30542 326 aa4.63□□□□□ -1.67
C11orf54-208ENST00000530279 MCAMP43121 646 aa4.63□□□□□ -1.67
C11orf54-208ENST00000530279 CDKN1CP49918 316 aaPredicted RBP4.63□□□□□ -1.67
C11orf54-208ENST00000530279 RBM5P52756 815 aaKnown RBP eCLIP4.63□□□□□ -1.67
C11orf54-208ENST00000530279 MAP3K12Q12852 859 aa4.63□□□□□ -1.67
C11orf54-208ENST00000530279 CHAF1AQ13111 956 aaPredicted RBP4.63□□□□□ -1.67
C11orf54-208ENST00000530279 SF1Q15637 639 aaKnown RBP4.63□□□□□ -1.67
C11orf54-208ENST00000530279 NTRK3Q16288 839 aa4.63□□□□□ -1.67
C11orf54-208ENST00000530279 BRDTQ58F21 947 aaPredicted RBP4.63□□□□□ -1.67
C11orf54-208ENST00000530279 TTC39AQ5SRH9 613 aa4.63□□□□□ -1.67
C11orf54-208ENST00000530279 PCSK4Q6UW60 755 aa4.63□□□□□ -1.67
C11orf54-208ENST00000530279 LBX2Q6XYB7 198 aa4.63□□□□□ -1.67
C11orf54-208ENST00000530279 ETV3LQ6ZN32 361 aa4.63□□□□□ -1.67
C11orf54-208ENST00000530279 EP400NLQ6ZTU2 488 aa4.63□□□□□ -1.67
C11orf54-208ENST00000530279 DZIP1Q86YF9 867 aaKnown RBP4.63□□□□□ -1.67
C11orf54-208ENST00000530279 LZTR1Q8N653 840 aa4.63□□□□□ -1.67
C11orf54-208ENST00000530279 KREMEN2Q8NCW0 462 aa4.63□□□□□ -1.67
C11orf54-208ENST00000530279 NPLOC4Q8TAT6 608 aa4.63□□□□□ -1.67
C11orf54-208ENST00000530279 FRS2Q8WU20 508 aa4.63□□□□□ -1.67
C11orf54-208ENST00000530279 STAG1Q8WVM7 1258 aa4.63□□□□□ -1.67
C11orf54-208ENST00000530279 LARP4BQ92615 738 aaKnown RBP4.63□□□□□ -1.67
C11orf54-208ENST00000530279 NSUN4Q96CB9 384 aaKnown RBP4.63□□□□□ -1.67
C11orf54-208ENST00000530279 YTHDC1Q96MU7 727 aaKnown RBP4.63□□□□□ -1.67
C11orf54-208ENST00000530279 PTCHD1Q96NR3 888 aa4.63□□□□□ -1.67
C11orf54-208ENST00000530279 MXD3Q9BW11 206 aa4.63□□□□□ -1.67
C11orf54-208ENST00000530279 LGR4Q9BXB1 951 aa4.63□□□□□ -1.67
C11orf54-208ENST00000530279 CELF4Q9BZC1 486 aaKnown RBP4.63□□□□□ -1.67
C11orf54-208ENST00000530279 DHX36Q9H2U1 1008 aaKnown RBP4.63□□□□□ -1.67
C11orf54-208ENST00000530279 L2HGDHQ9H9P8 463 aa4.63□□□□□ -1.67
C11orf54-208ENST00000530279 ZCCHC17Q9NP64 241 aaKnown RBP4.63□□□□□ -1.67
C11orf54-208ENST00000530279 SAMD15Q9P1V8 674 aa4.63□□□□□ -1.67
C11orf54-208ENST00000530279 DBNLQ9UJU6 430 aaKnown RBP4.63□□□□□ -1.67
C11orf54-208ENST00000530279 G3BP2Q9UN86 482 aaKnown RBP4.63□□□□□ -1.67
C11orf54-208ENST00000530279 POLR2AP24928 1970 aaKnown RBP4.63□□□□□ -1.67
C11orf54-208ENST00000530279 MROH7-TTC4A0A0A0MT08 1334 aa4.63□□□□□ -1.67
C11orf54-208ENST00000530279 ATRNL1Q5VV63 1379 aa4.63□□□□□ -1.67
C11orf54-208ENST00000530279 PAPPA2Q9BXP8 1791 aa4.63□□□□□ -1.67
C11orf54-208ENST00000530279 COL2A1P02458 1487 aaPredicted RBP4.62□□□□□ -1.67
C11orf54-208ENST00000530279 MANSC4A6NHS7 340 aaPredicted RBP4.62□□□□□ -1.67
C11orf54-208ENST00000530279 ADM5C9JUS6 153 aa4.62□□□□□ -1.67
C11orf54-208ENST00000530279 WNT9AO14904 365 aa4.62□□□□□ -1.67
C11orf54-208ENST00000530279 ERC2O15083 957 aa4.62□□□□□ -1.67
C11orf54-208ENST00000530279 PARNO95453 639 aaKnown RBP4.62□□□□□ -1.67
C11orf54-208ENST00000530279 EYA4O95677 639 aa4.62□□□□□ -1.67
C11orf54-208ENST00000530279 PLS3P13797 630 aa4.62□□□□□ -1.67
C11orf54-208ENST00000530279 TM4SF4P48230 202 aa4.62□□□□□ -1.67
C11orf54-208ENST00000530279 CTCFP49711 727 aaPredicted RBP4.62□□□□□ -1.67
C11orf54-208ENST00000530279 IL2P60568 153 aa4.62□□□□□ -1.67
C11orf54-208ENST00000530279 RPL11P62913 178 aaKnown RBP4.62□□□□□ -1.67
C11orf54-208ENST00000530279 MECOMQ03112 1051 aa4.62□□□□□ -1.67
C11orf54-208ENST00000530279 SREBF2Q12772 1141 aa4.62□□□□□ -1.67
C11orf54-208ENST00000530279 HLTFQ14527 1009 aaKnown RBP eCLIP4.62□□□□□ -1.67
C11orf54-208ENST00000530279 STAT4Q14765 748 aa4.62□□□□□ -1.67
C11orf54-208ENST00000530279 CRY1Q16526 586 aa4.62□□□□□ -1.67
C11orf54-208ENST00000530279 PRSS53Q2L4Q9 553 aa4.62□□□□□ -1.67
C11orf54-208ENST00000530279 C20orf194Q5TEA3 1177 aa4.62□□□□□ -1.67
C11orf54-208ENST00000530279 OTUD7BQ6GQQ9 843 aa4.62□□□□□ -1.67
C11orf54-208ENST00000530279 CDC42EP5Q6NZY7 148 aa4.62□□□□□ -1.67
C11orf54-208ENST00000530279 FGD2Q7Z6J4 655 aa4.62□□□□□ -1.67
C11orf54-208ENST00000530279 AACSQ86V21 672 aa4.62□□□□□ -1.67
C11orf54-208ENST00000530279 FAM26EQ8N5C1 309 aa4.62□□□□□ -1.67
C11orf54-208ENST00000530279 EDAQ92838 391 aa4.62□□□□□ -1.67
C11orf54-208ENST00000530279 FBXW5Q969U6 566 aa4.62□□□□□ -1.67
C11orf54-208ENST00000530279 SCLYQ96I15 445 aa4.62□□□□□ -1.67
C11orf54-208ENST00000530279 NOL10Q9BSC4 688 aaKnown RBP4.62□□□□□ -1.67
C11orf54-208ENST00000530279 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.62□□□□□ -1.67
C11orf54-208ENST00000530279 RWDD1Q9H446 243 aaPredicted RBP4.62□□□□□ -1.67
C11orf54-208ENST00000530279 TDRD3Q9H7E2 651 aaKnown RBP4.62□□□□□ -1.67
C11orf54-208ENST00000530279 ABCF2Q9UG63 623 aa4.62□□□□□ -1.67
C11orf54-208ENST00000530279 ZNF112Q9UJU3 913 aa4.62□□□□□ -1.67
C11orf54-208ENST00000530279 EXOC6BQ9Y2D4 811 aa4.62□□□□□ -1.67
C11orf54-208ENST00000530279 TRAF6Q9Y4K3 522 aa4.62□□□□□ -1.67
C11orf54-208ENST00000530279 PCDHA9Q9Y5H5 950 aa4.62□□□□□ -1.67
C11orf54-208ENST00000530279 PCDHA8Q9Y5H6 950 aa4.62□□□□□ -1.67
C11orf54-208ENST00000530279 TIMM13Q9Y5L4 95 aaPredicted RBP4.62□□□□□ -1.67
C11orf54-208ENST00000530279 ASTN2O75129 1339 aaPredicted RBP4.62□□□□□ -1.67
C11orf54-208ENST00000530279 TTC41PQ6P2S7 1318 aa4.62□□□□□ -1.67
C11orf54-208ENST00000530279 ZNF646O15015 1829 aaPredicted RBP4.62□□□□□ -1.67
C11orf54-208ENST00000530279 SPEF2Q9C093 1822 aa4.62□□□□□ -1.67
C11orf54-208ENST00000530279 RFX7Q2KHR2 1363 aa4.62□□□□□ -1.67
C11orf54-208ENST00000530279 ARAP2Q8WZ64 1704 aa4.61□□□□□ -1.67
C11orf54-208ENST00000530279 CLRN2A0PK11 232 aa4.61□□□□□ -1.67
C11orf54-208ENST00000530279 BLACEA4D250 179 aa4.61□□□□□ -1.67
C11orf54-208ENST00000530279 FOXS1O43638 330 aa4.61□□□□□ -1.67
C11orf54-208ENST00000530279 MAFKO60675 156 aa4.61□□□□□ -1.67
C11orf54-208ENST00000530279 CTNND1O60716 968 aaKnown RBP4.61□□□□□ -1.67
C11orf54-208ENST00000530279 RAMP2O60895 175 aa4.61□□□□□ -1.67
C11orf54-208ENST00000530279 WDHD1O75717 1129 aaPredicted RBP4.61□□□□□ -1.67
C11orf54-208ENST00000530279 GLRX3O76003 335 aaKnown RBP4.61□□□□□ -1.67
C11orf54-208ENST00000530279 F2P00734 622 aa4.61□□□□□ -1.67
C11orf54-208ENST00000530279 ZFYP08048 801 aaPredicted RBP4.61□□□□□ -1.67
C11orf54-208ENST00000530279 IFNGR1P15260 489 aa4.61□□□□□ -1.67
C11orf54-208ENST00000530279 LSSP48449 732 aa4.61□□□□□ -1.67
C11orf54-208ENST00000530279 RHBDL3P58872 404 aa4.61□□□□□ -1.67
C11orf54-208ENST00000530279 ITKQ08881 620 aa4.61□□□□□ -1.67
C11orf54-208ENST00000530279 SPIRE1Q08AE8 756 aa4.61□□□□□ -1.67
C11orf54-208ENST00000530279 LSAMPQ13449 338 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms