RNA–Protein interactions for RNA: ENST00000511944.5

NR1I3-230, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-230ENST00000511944 MATR3P43243 847 aaKnown RBP eCLIP9.82□□□□□ -0.84
NR1I3-230ENST00000511944 JAM2P57087 298 aa9.82□□□□□ -0.84
NR1I3-230ENST00000511944 POLR2FP61218 127 aaKnown RBP9.82□□□□□ -0.84
NR1I3-230ENST00000511944 KRT83P78385 493 aa9.82□□□□□ -0.84
NR1I3-230ENST00000511944 MRPS6P82932 125 aaKnown RBP9.82□□□□□ -0.84
NR1I3-230ENST00000511944 GCNT1Q02742 428 aa9.82□□□□□ -0.84
NR1I3-230ENST00000511944 SNX17Q15036 470 aa9.82□□□□□ -0.84
NR1I3-230ENST00000511944 MAP7D1Q3KQU3 841 aa9.82□□□□□ -0.84
NR1I3-230ENST00000511944 FAM26DQ5JW98 314 aa9.82□□□□□ -0.84
NR1I3-230ENST00000511944 SFMBT2Q5VUG0 894 aa9.82□□□□□ -0.84
NR1I3-230ENST00000511944 MRPL14Q6P1L8 145 aaKnown RBP9.82□□□□□ -0.84
NR1I3-230ENST00000511944 CXCL17Q6UXB2 119 aa9.82□□□□□ -0.84
NR1I3-230ENST00000511944 SV2AQ7L0J3 742 aa9.82□□□□□ -0.84
NR1I3-230ENST00000511944 TAF4BQ92750 862 aa9.82□□□□□ -0.84
NR1I3-230ENST00000511944 SPAG5Q96R06 1193 aa9.82□□□□□ -0.84
NR1I3-230ENST00000511944 TRAIPQ9BWF2 469 aa9.82□□□□□ -0.84
NR1I3-230ENST00000511944 CELF4Q9BZC1 486 aaKnown RBP9.82□□□□□ -0.84
NR1I3-230ENST00000511944 HAPLN2Q9GZV7 340 aa9.82□□□□□ -0.84
NR1I3-230ENST00000511944 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.82□□□□□ -0.84
NR1I3-230ENST00000511944 LUC7LQ9NQ29 371 aaKnown RBP9.82□□□□□ -0.84
NR1I3-230ENST00000511944 PAK6Q9NQU5 681 aaPredicted RBP9.82□□□□□ -0.84
NR1I3-230ENST00000511944 CHST12Q9NRB3 414 aa9.82□□□□□ -0.84
NR1I3-230ENST00000511944 AGPAT5Q9NUQ2 364 aa9.82□□□□□ -0.84
NR1I3-230ENST00000511944 PHF24Q9UPV7 400 aa9.82□□□□□ -0.84
NR1I3-230ENST00000511944 PTPN22Q9Y2R2 807 aa9.82□□□□□ -0.84
NR1I3-230ENST00000511944 TRIM17Q9Y577 477 aa9.82□□□□□ -0.84
NR1I3-230ENST00000511944 TRPV2Q9Y5S1 764 aa9.82□□□□□ -0.84
NR1I3-230ENST00000511944 A0A0U1RQG5 324 aaPredicted RBP9.81□□□□□ -0.84
NR1I3-230ENST00000511944 GOLGA8IPA6NC78 632 aa9.81□□□□□ -0.84
NR1I3-230ENST00000511944 LRRC53A6NM62 1247 aa9.81□□□□□ -0.84
NR1I3-230ENST00000511944 GOLGA8JA6NMD2 632 aa9.81□□□□□ -0.84
NR1I3-230ENST00000511944 EIF3CLB5ME19 914 aaKnown RBP9.81□□□□□ -0.84
NR1I3-230ENST00000511944 KBTBD13C9JR72 458 aa9.81□□□□□ -0.84
NR1I3-230ENST00000511944 DNM1LO00429 736 aa9.81□□□□□ -0.84
NR1I3-230ENST00000511944 EPHB6O15197 1021 aa9.81□□□□□ -0.84
NR1I3-230ENST00000511944 B4GALT5O43286 388 aa9.81□□□□□ -0.84
NR1I3-230ENST00000511944 LCA5LO95447 670 aa9.81□□□□□ -0.84
NR1I3-230ENST00000511944 C4BPAP04003 597 aaKnown RBP9.81□□□□□ -0.84
NR1I3-230ENST00000511944 ADH1AP07327 375 aa9.81□□□□□ -0.84
NR1I3-230ENST00000511944 GJB1P08034 283 aa9.81□□□□□ -0.84
NR1I3-230ENST00000511944 IQCF3P0C7M6 154 aa9.81□□□□□ -0.84
NR1I3-230ENST00000511944 FERP16591 822 aa9.81□□□□□ -0.84
NR1I3-230ENST00000511944 SLC9A1P19634 815 aa9.81□□□□□ -0.84
NR1I3-230ENST00000511944 TBXAS1P24557 533 aaPredicted RBP9.81□□□□□ -0.84
NR1I3-230ENST00000511944 STAT1P42224 750 aa9.81□□□□□ -0.84
NR1I3-230ENST00000511944 GCLMP48507 274 aa9.81□□□□□ -0.84
NR1I3-230ENST00000511944 KLK7P49862 253 aa9.81□□□□□ -0.84
NR1I3-230ENST00000511944 MFAP3P55082 362 aa9.81□□□□□ -0.84
NR1I3-230ENST00000511944 DLG4P78352 724 aa9.81□□□□□ -0.84
NR1I3-230ENST00000511944 ITGA7Q13683 1181 aa9.81□□□□□ -0.84
NR1I3-230ENST00000511944 PKN2Q16513 984 aaKnown RBP9.81□□□□□ -0.84
NR1I3-230ENST00000511944 DUOXA2Q1HG44 320 aa9.81□□□□□ -0.84
NR1I3-230ENST00000511944 KIZQ2M2Z5 673 aa9.81□□□□□ -0.84
NR1I3-230ENST00000511944 SLC9C1Q4G0N8 1177 aa9.81□□□□□ -0.84
NR1I3-230ENST00000511944 C10orf76Q5T2E6 689 aa9.81□□□□□ -0.84
NR1I3-230ENST00000511944 WDR59Q6PJI9 974 aa9.81□□□□□ -0.84
NR1I3-230ENST00000511944 RUFY4Q6ZNE9 571 aa9.81□□□□□ -0.84
NR1I3-230ENST00000511944 RRAGAQ7L523 313 aa9.81□□□□□ -0.84
NR1I3-230ENST00000511944 CATSPER4Q7RTX7 472 aa9.81□□□□□ -0.84
NR1I3-230ENST00000511944 VPS36Q86VN1 386 aa9.81□□□□□ -0.84
NR1I3-230ENST00000511944 CCAR2Q8N163 923 aaKnown RBP9.81□□□□□ -0.84
NR1I3-230ENST00000511944 CPLX3Q8WVH0 158 aa9.81□□□□□ -0.84
NR1I3-230ENST00000511944 DNAJB3Q8WWF6 145 aa9.81□□□□□ -0.84
NR1I3-230ENST00000511944 ZNF830Q96NB3 372 aaPredicted RBP9.81□□□□□ -0.84
NR1I3-230ENST00000511944 NT5C1BQ96P26 610 aa9.81□□□□□ -0.84
NR1I3-230ENST00000511944 EIF3CQ99613 913 aaKnown RBP9.81□□□□□ -0.84
NR1I3-230ENST00000511944 CRACR2AQ9BSW2 395 aa9.81□□□□□ -0.84
NR1I3-230ENST00000511944 CCDC94Q9BW85 323 aaPredicted RBP9.81□□□□□ -0.84
NR1I3-230ENST00000511944 IMPG2Q9BZV3 1241 aa9.81□□□□□ -0.84
NR1I3-230ENST00000511944 SENP6Q9GZR1 1112 aaPredicted RBP9.81□□□□□ -0.84
NR1I3-230ENST00000511944 FAM49AQ9H0Q0 323 aaPredicted RBP9.81□□□□□ -0.84
NR1I3-230ENST00000511944 RPF1Q9H9Y2 349 aaKnown RBP9.81□□□□□ -0.84
NR1I3-230ENST00000511944 TOPORSQ9NS56 1045 aaPredicted RBP9.81□□□□□ -0.84
NR1I3-230ENST00000511944 RAB20Q9NX57 234 aa9.81□□□□□ -0.84
NR1I3-230ENST00000511944 C2CD2Q9Y426 696 aa9.81□□□□□ -0.84
NR1I3-230ENST00000511944 PTCH2Q9Y6C5 1203 aa9.81□□□□□ -0.84
NR1I3-230ENST00000511944 F8VZ95 297 aa9.8□□□□□ -0.84
NR1I3-230ENST00000511944 RBAK-RBAKDNI3L0D1 243 aa9.8□□□□□ -0.84
NR1I3-230ENST00000511944 RNF225M0QZC1 329 aaPredicted RBP9.8□□□□□ -0.84
NR1I3-230ENST00000511944 NDUFA10O95299 355 aa9.8□□□□□ -0.84
NR1I3-230ENST00000511944 TNNC2P02585 160 aa9.8□□□□□ -0.84
NR1I3-230ENST00000511944 DLATP10515 647 aaKnown RBP9.8□□□□□ -0.84
NR1I3-230ENST00000511944 TNNI1P19237 187 aa9.8□□□□□ -0.84
NR1I3-230ENST00000511944 HOXA11P31270 313 aaPredicted RBP9.8□□□□□ -0.84
NR1I3-230ENST00000511944 ACOT2P49753 483 aa9.8□□□□□ -0.84
NR1I3-230ENST00000511944 C1QTNF8P60827 252 aa9.8□□□□□ -0.84
NR1I3-230ENST00000511944 RELBQ01201 579 aa9.8□□□□□ -0.84
NR1I3-230ENST00000511944 MGAT3Q09327 533 aa9.8□□□□□ -0.84
NR1I3-230ENST00000511944 ENOX2Q16206 610 aaKnown RBP9.8□□□□□ -0.84
NR1I3-230ENST00000511944 WDR44Q5JSH3 913 aa9.8□□□□□ -0.84
NR1I3-230ENST00000511944 EEF1DP3Q658K8 133 aa9.8□□□□□ -0.84
NR1I3-230ENST00000511944 E4F1Q66K89 784 aaPredicted RBP9.8□□□□□ -0.84
NR1I3-230ENST00000511944 HGSNATQ68CP4 663 aa9.8□□□□□ -0.84
NR1I3-230ENST00000511944 GDF6Q6KF10 455 aaPredicted RBP9.8□□□□□ -0.84
NR1I3-230ENST00000511944 HACE1Q8IYU2 909 aa9.8□□□□□ -0.84
NR1I3-230ENST00000511944 LINC00528Q8N1L1 170 aa9.8□□□□□ -0.84
NR1I3-230ENST00000511944 CCDC155Q8N6L0 562 aa9.8□□□□□ -0.84
NR1I3-230ENST00000511944 SHC3Q92529 594 aa9.8□□□□□ -0.84
NR1I3-230ENST00000511944 CCDC127Q96BQ5 260 aa9.8□□□□□ -0.84
NR1I3-230ENST00000511944 ANKRD36BP1Q96IX9 119 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 1146.7 ms