RNA–Protein interactions for RNA: ENST00000487172.1

PCOLCE-208, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 2

Gene PCOLCE, Length 686 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-208ENST00000487172 FUT10Q6P4F1 479 aa20.91■□□□□ 0.94
PCOLCE-208ENST00000487172 TRIM59Q8IWR1 403 aa20.91■□□□□ 0.94
PCOLCE-208ENST00000487172 TMEM130Q8N3G9 435 aa20.91■□□□□ 0.94
PCOLCE-208ENST00000487172 LRRC52Q8N7C0 313 aa20.91■□□□□ 0.94
PCOLCE-208ENST00000487172 POF1BQ8WVV4 589 aa20.91■□□□□ 0.94
PCOLCE-208ENST00000487172 ALG13Q9NP73 1137 aaKnown RBP20.91■□□□□ 0.94
PCOLCE-208ENST00000487172 SIX4Q9UIU6 781 aa20.91■□□□□ 0.94
PCOLCE-208ENST00000487172 NFE2L3Q9Y4A8 694 aa20.91■□□□□ 0.94
PCOLCE-208ENST00000487172 GRM6O15303 877 aa20.9■□□□□ 0.94
PCOLCE-208ENST00000487172 TRIM49P0CI25 452 aa20.9■□□□□ 0.94
PCOLCE-208ENST00000487172 TRIM49CP0CI26 452 aa20.9■□□□□ 0.94
PCOLCE-208ENST00000487172 IGFBP6P24592 240 aaPredicted RBP20.9■□□□□ 0.94
PCOLCE-208ENST00000487172 POLR2BP30876 1174 aaKnown RBP20.9■□□□□ 0.94
PCOLCE-208ENST00000487172 PNPLA4P41247 253 aa20.9■□□□□ 0.94
PCOLCE-208ENST00000487172 AARSP49588 968 aaKnown RBP eCLIP20.9■□□□□ 0.94
PCOLCE-208ENST00000487172 ZNF165P49910 485 aa20.9■□□□□ 0.94
PCOLCE-208ENST00000487172 PPP3CAQ08209 521 aa20.9■□□□□ 0.94
PCOLCE-208ENST00000487172 ZACNQ401N2 412 aa20.9■□□□□ 0.94
PCOLCE-208ENST00000487172 SV2AQ7L0J3 742 aa20.9■□□□□ 0.94
PCOLCE-208ENST00000487172 SLC35C1Q96A29 364 aa20.9■□□□□ 0.94
PCOLCE-208ENST00000487172 FAM84AQ96KN4 292 aa20.9■□□□□ 0.94
PCOLCE-208ENST00000487172 CNOT6LQ96LI5 555 aaKnown RBP20.9■□□□□ 0.94
PCOLCE-208ENST00000487172 VN1R3Q9BXE9 311 aa20.9■□□□□ 0.94
PCOLCE-208ENST00000487172 TMEM8AQ9HCN3 771 aa20.9■□□□□ 0.94
PCOLCE-208ENST00000487172 LMCD1Q9NZU5 365 aa20.9■□□□□ 0.94
PCOLCE-208ENST00000487172 AGAP1Q9UPQ3 857 aa20.9■□□□□ 0.94
PCOLCE-208ENST00000487172 NUB1Q9Y5A7 615 aa20.9■□□□□ 0.94
PCOLCE-208ENST00000487172 SF3B1O75533 1304 aaKnown RBP eCLIP20.89■□□□□ 0.93
PCOLCE-208ENST00000487172 RFXAPO00287 272 aa20.89■□□□□ 0.93
PCOLCE-208ENST00000487172 PPEF2O14830 753 aa20.89■□□□□ 0.93
PCOLCE-208ENST00000487172 CST3P01034 146 aaPredicted RBP20.89■□□□□ 0.93
PCOLCE-208ENST00000487172 SOD2P04179 222 aa20.89■□□□□ 0.93
PCOLCE-208ENST00000487172 POU3F3P20264 500 aaPredicted RBP20.89■□□□□ 0.93
PCOLCE-208ENST00000487172 TAF6P49848 677 aa20.89■□□□□ 0.93
PCOLCE-208ENST00000487172 LILRA4P59901 499 aa20.89■□□□□ 0.93
PCOLCE-208ENST00000487172 CAMK1Q14012 370 aa20.89■□□□□ 0.93
PCOLCE-208ENST00000487172 NCAPHQ15003 741 aa20.89■□□□□ 0.93
PCOLCE-208ENST00000487172 TDRD10Q5VZ19 366 aaKnown RBP20.89■□□□□ 0.93
PCOLCE-208ENST00000487172 KRT39Q6A163 491 aa20.89■□□□□ 0.93
PCOLCE-208ENST00000487172 PDE12Q6L8Q7 609 aaKnown RBP20.89■□□□□ 0.93
PCOLCE-208ENST00000487172 GPR65Q8IYL9 337 aa20.89■□□□□ 0.93
PCOLCE-208ENST00000487172 SUSD3Q96L08 255 aa20.89■□□□□ 0.93
PCOLCE-208ENST00000487172 ZNF560Q96MR9 790 aa20.89■□□□□ 0.93
PCOLCE-208ENST00000487172 HERC2P3Q9BVR0 1158 aa20.89■□□□□ 0.93
PCOLCE-208ENST00000487172 GPR62Q9BZJ7 368 aa20.89■□□□□ 0.93
PCOLCE-208ENST00000487172 CHST7Q9NS84 486 aa20.89■□□□□ 0.93
PCOLCE-208ENST00000487172 SAMSN1Q9NSI8 373 aaKnown RBP20.89■□□□□ 0.93
PCOLCE-208ENST00000487172 R3HCC1Q9Y3T6 440 aaKnown RBP20.89■□□□□ 0.93
PCOLCE-208ENST00000487172 SMTNL1A8MU46 457 aa20.88■□□□□ 0.93
PCOLCE-208ENST00000487172 PMM2O15305 246 aa20.88■□□□□ 0.93
PCOLCE-208ENST00000487172 STAU1O95793 577 aaKnown RBP20.88■□□□□ 0.93
PCOLCE-208ENST00000487172 KRT19P08727 400 aa20.88■□□□□ 0.93
PCOLCE-208ENST00000487172 DNAJB1P25685 340 aa20.88■□□□□ 0.93
PCOLCE-208ENST00000487172 ATICP31939 592 aa20.88■□□□□ 0.93
PCOLCE-208ENST00000487172 BRCC3P46736 316 aa20.88■□□□□ 0.93
PCOLCE-208ENST00000487172 GCLMP48507 274 aa20.88■□□□□ 0.93
PCOLCE-208ENST00000487172 TIGD5Q53EQ6 642 aa20.88■□□□□ 0.93
PCOLCE-208ENST00000487172 DCAF17Q5H9S7 520 aaPredicted RBP20.88■□□□□ 0.93
PCOLCE-208ENST00000487172 TCERG1LQ5VWI1 586 aa20.88■□□□□ 0.93
PCOLCE-208ENST00000487172 LRSAM1Q6UWE0 723 aa20.88■□□□□ 0.93
PCOLCE-208ENST00000487172 HASPINQ8TF76 798 aa20.88■□□□□ 0.93
PCOLCE-208ENST00000487172 GDPD5Q8WTR4 605 aa20.88■□□□□ 0.93
PCOLCE-208ENST00000487172 PRDM12Q9H4Q4 367 aa20.88■□□□□ 0.93
PCOLCE-208ENST00000487172 SCN1AP35498 2009 aa20.88■□□□□ 0.93
PCOLCE-208ENST00000487172 LAMA3Q16787 3333 aa20.87■□□□□ 0.93
PCOLCE-208ENST00000487172 M0QZQ0 153 aa20.87■□□□□ 0.93
PCOLCE-208ENST00000487172 SYN3O14994 580 aa20.87■□□□□ 0.93
PCOLCE-208ENST00000487172 PHACTR2O75167 634 aa20.87■□□□□ 0.93
PCOLCE-208ENST00000487172 CTSAP10619 480 aa20.87■□□□□ 0.93
PCOLCE-208ENST00000487172 EEF1GP26641 437 aaKnown RBP20.87■□□□□ 0.93
PCOLCE-208ENST00000487172 ZNF445P59923 1031 aa20.87■□□□□ 0.93
PCOLCE-208ENST00000487172 MYO1EQ12965 1108 aa20.87■□□□□ 0.93
PCOLCE-208ENST00000487172 BIRC3Q13489 604 aa20.87■□□□□ 0.93
PCOLCE-208ENST00000487172 TRPC3Q13507 836 aa20.87■□□□□ 0.93
PCOLCE-208ENST00000487172 PTPROQ16827 1216 aa20.87■□□□□ 0.93
PCOLCE-208ENST00000487172 USP41Q3LFD5 358 aa20.87■□□□□ 0.93
PCOLCE-208ENST00000487172 SV2CQ496J9 727 aa20.87■□□□□ 0.93
PCOLCE-208ENST00000487172 CDKAL1Q5VV42 579 aa20.87■□□□□ 0.93
PCOLCE-208ENST00000487172 SCARA3Q6AZY7 606 aa20.87■□□□□ 0.93
PCOLCE-208ENST00000487172 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.87■□□□□ 0.93
PCOLCE-208ENST00000487172 VPS52Q8N1B4 723 aa20.87■□□□□ 0.93
PCOLCE-208ENST00000487172 ZBP1Q9H171 429 aa20.87■□□□□ 0.93
PCOLCE-208ENST00000487172 VRTNQ9H8Y1 702 aa20.87■□□□□ 0.93
PCOLCE-208ENST00000487172 NGRNQ9NPE2 291 aaKnown RBP20.87■□□□□ 0.93
PCOLCE-208ENST00000487172 TLR9Q9NR96 1032 aa20.87■□□□□ 0.93
PCOLCE-208ENST00000487172 FANCLQ9NW38 375 aa20.87■□□□□ 0.93
PCOLCE-208ENST00000487172 MAGEC2Q9UBF1 373 aaPredicted RBP20.87■□□□□ 0.93
PCOLCE-208ENST00000487172 UTP18Q9Y5J1 556 aaKnown RBP eCLIP20.87■□□□□ 0.93
PCOLCE-208ENST00000487172 COL4A4P53420 1690 aaPredicted RBP20.86■□□□□ 0.93
PCOLCE-208ENST00000487172 KPNA7A9QM74 516 aa20.86■□□□□ 0.93
PCOLCE-208ENST00000487172 FSCN2O14926 492 aa20.86■□□□□ 0.93
PCOLCE-208ENST00000487172 SPTLC1O15269 473 aa20.86■□□□□ 0.93
PCOLCE-208ENST00000487172 P4HA2O15460 535 aa20.86■□□□□ 0.93
PCOLCE-208ENST00000487172 VNN1O95497 513 aa20.86■□□□□ 0.93
PCOLCE-208ENST00000487172 FGFR3P22607 806 aa20.86■□□□□ 0.93
PCOLCE-208ENST00000487172 MXI1P50539 228 aa20.86■□□□□ 0.93
PCOLCE-208ENST00000487172 ERVFC1P60507 584 aa20.86■□□□□ 0.93
PCOLCE-208ENST00000487172 KCNH2Q12809 1159 aa20.86■□□□□ 0.93
PCOLCE-208ENST00000487172 NCOA4Q13772 614 aa20.86■□□□□ 0.93
PCOLCE-208ENST00000487172 BMS1Q14692 1282 aaKnown RBP20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms