RNA–Protein interactions for RNA: ENST00000476413.1

VPS50-212, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 381 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-212ENST00000476413 LMF1Q96S06 567 aa7.33□□□□□ -1.24
VPS50-212ENST00000476413 CPEB1Q9BZB8 566 aaKnown RBP7.33□□□□□ -1.24
VPS50-212ENST00000476413 SLAMF7Q9NQ25 335 aa7.33□□□□□ -1.24
VPS50-212ENST00000476413 STARD7Q9NQZ5 370 aa7.33□□□□□ -1.24
VPS50-212ENST00000476413 GNL3LQ9NVN8 582 aaKnown RBP7.33□□□□□ -1.24
VPS50-212ENST00000476413 GPRC5BQ9NZH0 403 aa7.33□□□□□ -1.24
VPS50-212ENST00000476413 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.33□□□□□ -1.24
VPS50-212ENST00000476413 DUSP10Q9Y6W6 482 aa7.33□□□□□ -1.24
VPS50-212ENST00000476413 POM121BA6NF01 834 aa7.32□□□□□ -1.24
VPS50-212ENST00000476413 AMHP03971 560 aa7.32□□□□□ -1.24
VPS50-212ENST00000476413 GJB1P08034 283 aa7.32□□□□□ -1.24
VPS50-212ENST00000476413 IL6STP40189 918 aaPredicted RBP7.32□□□□□ -1.24
VPS50-212ENST00000476413 STT3AP46977 705 aa7.32□□□□□ -1.24
VPS50-212ENST00000476413 TRAPPC10P48553 1259 aa7.32□□□□□ -1.24
VPS50-212ENST00000476413 KRT72Q14CN4 511 aa7.32□□□□□ -1.24
VPS50-212ENST00000476413 C3orf38Q5JPI3 329 aa7.32□□□□□ -1.24
VPS50-212ENST00000476413 FAM209BQ5JX69 171 aa7.32□□□□□ -1.24
VPS50-212ENST00000476413 DGKKQ5KSL6 1271 aa7.32□□□□□ -1.24
VPS50-212ENST00000476413 LIX1LQ8IVB5 337 aa7.32□□□□□ -1.24
VPS50-212ENST00000476413 ARL8AQ96BM9 186 aa7.32□□□□□ -1.24
VPS50-212ENST00000476413 SUCLG2Q96I99 432 aa7.32□□□□□ -1.24
VPS50-212ENST00000476413 PACSIN1Q9BY11 444 aa7.32□□□□□ -1.24
VPS50-212ENST00000476413 NELFAQ9H3P2 528 aa7.32□□□□□ -1.24
VPS50-212ENST00000476413 ST6GALNAC1Q9NSC7 600 aaPredicted RBP7.32□□□□□ -1.24
VPS50-212ENST00000476413 TRMT13Q9NUP7 481 aaKnown RBP7.32□□□□□ -1.24
VPS50-212ENST00000476413 RLIMQ9NVW2 624 aa7.32□□□□□ -1.24
VPS50-212ENST00000476413 AFF4Q9UHB7 1163 aaKnown RBP7.32□□□□□ -1.24
VPS50-212ENST00000476413 TRIM43BA6NCK2 446 aa7.31□□□□□ -1.24
VPS50-212ENST00000476413 DNAJB5O75953 348 aa7.31□□□□□ -1.24
VPS50-212ENST00000476413 HAUS5O94927 633 aa7.31□□□□□ -1.24
VPS50-212ENST00000476413 IL18RAPO95256 599 aa7.31□□□□□ -1.24
VPS50-212ENST00000476413 RAP2BP61225 183 aa7.31□□□□□ -1.24
VPS50-212ENST00000476413 NOMO3P69849 1222 aa7.31□□□□□ -1.24
VPS50-212ENST00000476413 CHAF1AQ13111 956 aaPredicted RBP7.31□□□□□ -1.24
VPS50-212ENST00000476413 STK3Q13188 491 aa7.31□□□□□ -1.24
VPS50-212ENST00000476413 FKBP15Q5T1M5 1219 aa7.31□□□□□ -1.24
VPS50-212ENST00000476413 IZUMO3Q5VZ72 239 aa7.31□□□□□ -1.24
VPS50-212ENST00000476413 MICU3Q86XE3 530 aa7.31□□□□□ -1.24
VPS50-212ENST00000476413 PDSS2Q86YH6 399 aa7.31□□□□□ -1.24
VPS50-212ENST00000476413 GIMAP8Q8ND71 665 aaPredicted RBP7.31□□□□□ -1.24
VPS50-212ENST00000476413 TRIM43Q96BQ3 446 aaPredicted RBP7.31□□□□□ -1.24
VPS50-212ENST00000476413 GNRHR2Q96P88 292 aa7.31□□□□□ -1.24
VPS50-212ENST00000476413 GSTO2Q9H4Y5 243 aa7.31□□□□□ -1.24
VPS50-212ENST00000476413 BRD9Q9H8M2 597 aa7.31□□□□□ -1.24
VPS50-212ENST00000476413 GPR35Q9HC97 309 aa7.31□□□□□ -1.24
VPS50-212ENST00000476413 PNPLA8Q9NP80 782 aa7.31□□□□□ -1.24
VPS50-212ENST00000476413 PADI4Q9UM07 663 aa7.31□□□□□ -1.24
VPS50-212ENST00000476413 BTN3A1O00481 513 aa7.3□□□□□ -1.24
VPS50-212ENST00000476413 PAX4O43316 350 aa7.3□□□□□ -1.24
VPS50-212ENST00000476413 TCEA3O75764 348 aa7.3□□□□□ -1.24
VPS50-212ENST00000476413 GNAI3P08754 354 aa7.3□□□□□ -1.24
VPS50-212ENST00000476413 RARBP10826 455 aa7.3□□□□□ -1.24
VPS50-212ENST00000476413 SLC6A2P23975 617 aa7.3□□□□□ -1.24
VPS50-212ENST00000476413 CFPP27918 469 aa7.3□□□□□ -1.24
VPS50-212ENST00000476413 RPS16P62249 146 aaKnown RBP7.3□□□□□ -1.24
VPS50-212ENST00000476413 GNAI1P63096 354 aa7.3□□□□□ -1.24
VPS50-212ENST00000476413 BTKQ06187 659 aa7.3□□□□□ -1.24
VPS50-212ENST00000476413 UBXN2BQ14CS0 331 aa7.3□□□□□ -1.24
VPS50-212ENST00000476413 PKN1Q16512 942 aa7.3□□□□□ -1.24
VPS50-212ENST00000476413 KLHDC7AQ5VTJ3 777 aa7.3□□□□□ -1.24
VPS50-212ENST00000476413 HIBCHQ6NVY1 386 aaPredicted RBP7.3□□□□□ -1.24
VPS50-212ENST00000476413 APBB1IPQ7Z5R6 666 aaPredicted RBP7.3□□□□□ -1.24
VPS50-212ENST00000476413 TAX1BP1Q86VP1 789 aa7.3□□□□□ -1.24
VPS50-212ENST00000476413 ACRBPQ8NEB7 543 aa7.3□□□□□ -1.24
VPS50-212ENST00000476413 NLGN4YQ8NFZ3 816 aaPredicted RBP7.3□□□□□ -1.24
VPS50-212ENST00000476413 OR6B3Q8NGW1 331 aa7.3□□□□□ -1.24
VPS50-212ENST00000476413 POF1BQ8WVV4 589 aa7.3□□□□□ -1.24
VPS50-212ENST00000476413 TMEM176AQ96HP8 235 aa7.3□□□□□ -1.24
VPS50-212ENST00000476413 COLEC11Q9BWP8 271 aa7.3□□□□□ -1.24
VPS50-212ENST00000476413 WDR12Q9GZL7 423 aaKnown RBP7.3□□□□□ -1.24
VPS50-212ENST00000476413 SACM1LQ9NTJ5 587 aa7.3□□□□□ -1.24
VPS50-212ENST00000476413 CFAP97Q9P2B7 532 aa7.3□□□□□ -1.24
VPS50-212ENST00000476413 SRRDQ9UH36 339 aa7.3□□□□□ -1.24
VPS50-212ENST00000476413 AGAP1Q9UPQ3 857 aa7.3□□□□□ -1.24
VPS50-212ENST00000476413 SH3BP1Q9Y3L3 701 aa7.3□□□□□ -1.24
VPS50-212ENST00000476413 A0A1W2PPC4 97 aa7.29□□□□□ -1.24
VPS50-212ENST00000476413 LAMTOR5O43504 91 aa7.29□□□□□ -1.24
VPS50-212ENST00000476413 FGF18O76093 207 aa7.29□□□□□ -1.24
VPS50-212ENST00000476413 PRSS23O95084 383 aa7.29□□□□□ -1.24
VPS50-212ENST00000476413 POMCP01189 267 aa7.29□□□□□ -1.24
VPS50-212ENST00000476413 C8AP07357 584 aa7.29□□□□□ -1.24
VPS50-212ENST00000476413 ALAS1P13196 640 aa7.29□□□□□ -1.24
VPS50-212ENST00000476413 ABCB4P21439 1286 aa7.29□□□□□ -1.24
VPS50-212ENST00000476413 PPM1AP35813 382 aa7.29□□□□□ -1.24
VPS50-212ENST00000476413 RPS19P39019 145 aaKnown RBP7.29□□□□□ -1.24
VPS50-212ENST00000476413 PMS2P11Q13670 270 aa7.29□□□□□ -1.24
VPS50-212ENST00000476413 GRM7Q14831 915 aa7.29□□□□□ -1.24
VPS50-212ENST00000476413 TUBB8Q3ZCM7 444 aa7.29□□□□□ -1.24
VPS50-212ENST00000476413 CRB2Q5IJ48 1285 aa7.29□□□□□ -1.24
VPS50-212ENST00000476413 ATXN7L2Q5T6C5 722 aaPredicted RBP7.29□□□□□ -1.24
VPS50-212ENST00000476413 UTP14CQ5TAP6 766 aaKnown RBP7.29□□□□□ -1.24
VPS50-212ENST00000476413 SLFN13Q68D06 897 aa7.29□□□□□ -1.24
VPS50-212ENST00000476413 SP8Q8IXZ3 490 aa7.29□□□□□ -1.24
VPS50-212ENST00000476413 RNF169Q8NCN4 708 aa7.29□□□□□ -1.24
VPS50-212ENST00000476413 TMIEQ8NEW7 156 aa7.29□□□□□ -1.24
VPS50-212ENST00000476413 OR52N2Q8NGI0 321 aa7.29□□□□□ -1.24
VPS50-212ENST00000476413 ZSCAN18Q8TBC5 510 aaPredicted RBP7.29□□□□□ -1.24
VPS50-212ENST00000476413 BRI3BPQ8WY22 251 aa7.29□□□□□ -1.24
VPS50-212ENST00000476413 CRB3Q9BUF7 120 aa7.29□□□□□ -1.24
VPS50-212ENST00000476413 BRIP1Q9BX63 1249 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms