RNA–Protein interactions for RNA: ENST00000472962.1

CCDC142-205, Transcript of coiled-coil domain containing 142, humanhuman

TSL 3

Gene CCDC142, Length 645 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC142-205ENST00000472962 ZNF568Q3ZCX4 644 aa17.09■□□□□ 0.33
CCDC142-205ENST00000472962 ZNF280DQ6N043 979 aa17.09■□□□□ 0.33
CCDC142-205ENST00000472962 POTEHQ6S545 545 aa17.09■□□□□ 0.33
CCDC142-205ENST00000472962 PRR23CQ6ZRP0 262 aa17.09■□□□□ 0.33
CCDC142-205ENST00000472962 NECAB1Q8N987 351 aa17.09■□□□□ 0.33
CCDC142-205ENST00000472962 ZSCAN18Q8TBC5 510 aaPredicted RBP17.09■□□□□ 0.33
CCDC142-205ENST00000472962 ZSWIM3Q96MP5 696 aa17.09■□□□□ 0.33
CCDC142-205ENST00000472962 MTMR9Q96QG7 549 aa17.09■□□□□ 0.33
CCDC142-205ENST00000472962 KIF26AQ9ULI4 1882 aaPredicted RBP17.09■□□□□ 0.33
CCDC142-205ENST00000472962 WNT7AO00755 349 aa17.08■□□□□ 0.32
CCDC142-205ENST00000472962 SYN3O14994 580 aa17.08■□□□□ 0.32
CCDC142-205ENST00000472962 EPB41L2O43491 1005 aaKnown RBP17.08■□□□□ 0.32
CCDC142-205ENST00000472962 LRP3O75074 770 aa17.08■□□□□ 0.32
CCDC142-205ENST00000472962 CTDNEP1O95476 244 aa17.08■□□□□ 0.32
CCDC142-205ENST00000472962 CCR2P41597 374 aa17.08■□□□□ 0.32
CCDC142-205ENST00000472962 SOX4Q06945 474 aaPredicted RBP17.08■□□□□ 0.32
CCDC142-205ENST00000472962 SRSF5Q13243 272 aaKnown RBP17.08■□□□□ 0.32
CCDC142-205ENST00000472962 TEAD2Q15562 447 aa17.08■□□□□ 0.32
CCDC142-205ENST00000472962 NT5DC1Q5TFE4 455 aa17.08■□□□□ 0.32
CCDC142-205ENST00000472962 TPGS2Q68CL5 300 aa17.08■□□□□ 0.32
CCDC142-205ENST00000472962 MAP4K3Q8IVH8 894 aa17.08■□□□□ 0.32
CCDC142-205ENST00000472962 KIFAP3Q92845 792 aa17.08■□□□□ 0.32
CCDC142-205ENST00000472962 TNFRSF25Q93038 417 aa17.08■□□□□ 0.32
CCDC142-205ENST00000472962 ACAP3Q96P50 834 aa17.08■□□□□ 0.32
CCDC142-205ENST00000472962 POLR3CQ9BUI4 534 aaPredicted RBP17.08■□□□□ 0.32
CCDC142-205ENST00000472962 TMEM60Q9H2L4 133 aa17.08■□□□□ 0.32
CCDC142-205ENST00000472962 FBXL5Q9UKA1 691 aa17.08■□□□□ 0.32
CCDC142-205ENST00000472962 SDK1Q7Z5N4 2213 aa17.08■□□□□ 0.32
CCDC142-205ENST00000472962 MYH11P35749 1972 aa17.08■□□□□ 0.32
CCDC142-205ENST00000472962 SHISA7A6NL88 538 aa17.07■□□□□ 0.32
CCDC142-205ENST00000472962 SLC38A8A6NNN8 435 aa17.07■□□□□ 0.32
CCDC142-205ENST00000472962 HEPACAM2A8MVW5 462 aa17.07■□□□□ 0.32
CCDC142-205ENST00000472962 MICAL2O94851 1124 aa17.07■□□□□ 0.32
CCDC142-205ENST00000472962 ANKRD1Q15327 319 aa17.07■□□□□ 0.32
CCDC142-205ENST00000472962 SAFBQ15424 915 aaKnown RBP eCLIP17.07■□□□□ 0.32
CCDC142-205ENST00000472962 CSRP2Q16527 193 aa17.07■□□□□ 0.32
CCDC142-205ENST00000472962 AASDHQ4L235 1098 aaPredicted RBP17.07■□□□□ 0.32
CCDC142-205ENST00000472962 CD300LGQ6UXG3 332 aa17.07■□□□□ 0.32
CCDC142-205ENST00000472962 GPIHBP1Q8IV16 184 aa17.07■□□□□ 0.32
CCDC142-205ENST00000472962 MFSD6LQ8IWD5 586 aa17.07■□□□□ 0.32
CCDC142-205ENST00000472962 CEP120Q8N960 986 aa17.07■□□□□ 0.32
CCDC142-205ENST00000472962 LEMD2Q8NC56 503 aa17.07■□□□□ 0.32
CCDC142-205ENST00000472962 TTC8Q8TAM2 541 aa17.07■□□□□ 0.32
CCDC142-205ENST00000472962 COL4A2P08572 1712 aa17.07■□□□□ 0.32
CCDC142-205ENST00000472962 NRG2O14511 850 aaPredicted RBP17.06■□□□□ 0.32
CCDC142-205ENST00000472962 DPYSL4O14531 572 aa17.06■□□□□ 0.32
CCDC142-205ENST00000472962 HRO43593 1189 aa17.06■□□□□ 0.32
CCDC142-205ENST00000472962 GDF9O60383 454 aa17.06■□□□□ 0.32
CCDC142-205ENST00000472962 CHRNB1P11230 501 aa17.06■□□□□ 0.32
CCDC142-205ENST00000472962 TDGF1P13385 188 aa17.06■□□□□ 0.32
CCDC142-205ENST00000472962 FDPSP14324 419 aaKnown RBP17.06■□□□□ 0.32
CCDC142-205ENST00000472962 RPA1P27694 616 aa17.06■□□□□ 0.32
CCDC142-205ENST00000472962 CNR2P34972 360 aa17.06■□□□□ 0.32
CCDC142-205ENST00000472962 CCT6AP40227 531 aaKnown RBP17.06■□□□□ 0.32
CCDC142-205ENST00000472962 GRM5P41594 1212 aa17.06■□□□□ 0.32
CCDC142-205ENST00000472962 PEX3P56589 373 aa17.06■□□□□ 0.32
CCDC142-205ENST00000472962 DMWDQ09019 674 aa17.06■□□□□ 0.32
CCDC142-205ENST00000472962 HAUS3Q68CZ6 603 aa17.06■□□□□ 0.32
CCDC142-205ENST00000472962 MAMSTRQ6ZN01 415 aa17.06■□□□□ 0.32
CCDC142-205ENST00000472962 LONP2Q86WA8 852 aa17.06■□□□□ 0.32
CCDC142-205ENST00000472962 SPEM1Q8N4L4 309 aa17.06■□□□□ 0.32
CCDC142-205ENST00000472962 C12orf50Q8NA57 414 aaPredicted RBP17.06■□□□□ 0.32
CCDC142-205ENST00000472962 APPL2Q8NEU8 664 aa17.06■□□□□ 0.32
CCDC142-205ENST00000472962 DDX1Q92499 740 aaKnown RBP17.06■□□□□ 0.32
CCDC142-205ENST00000472962 E2F7Q96AV8 911 aa17.06■□□□□ 0.32
CCDC142-205ENST00000472962 MRPL4Q9BYD3 311 aaKnown RBP17.06■□□□□ 0.32
CCDC142-205ENST00000472962 GPR88Q9GZN0 384 aa17.06■□□□□ 0.32
CCDC142-205ENST00000472962 CDT1Q9H211 546 aa17.06■□□□□ 0.32
CCDC142-205ENST00000472962 BHMT2Q9H2M3 363 aa17.06■□□□□ 0.32
CCDC142-205ENST00000472962 TRPV5Q9NQA5 729 aa17.06■□□□□ 0.32
CCDC142-205ENST00000472962 RBM12Q9NTZ6 932 aaKnown RBP17.06■□□□□ 0.32
CCDC142-205ENST00000472962 DAXXQ9UER7 740 aaPredicted RBP17.06■□□□□ 0.32
CCDC142-205ENST00000472962 TNFSF13BQ9Y275 285 aa17.06■□□□□ 0.32
CCDC142-205ENST00000472962 SPAG17Q6Q759 2223 aa17.06■□□□□ 0.32
CCDC142-205ENST00000472962 ATG2BQ96BY7 2078 aa17.06■□□□□ 0.32
CCDC142-205ENST00000472962 ZNF638Q14966 1978 aaKnown RBP17.06■□□□□ 0.32
CCDC142-205ENST00000472962 GREB1Q4ZG55 1949 aa17.06■□□□□ 0.32
CCDC142-205ENST00000472962 FOXD2O60548 495 aaPredicted RBP17.05■□□□□ 0.32
CCDC142-205ENST00000472962 RPL9P32969 192 aaKnown RBP17.05■□□□□ 0.32
CCDC142-205ENST00000472962 MATR3P43243 847 aaKnown RBP eCLIP17.05■□□□□ 0.32
CCDC142-205ENST00000472962 SOX9P48436 509 aa17.05■□□□□ 0.32
CCDC142-205ENST00000472962 GUCY1B3Q02153 619 aa17.05■□□□□ 0.32
CCDC142-205ENST00000472962 ZNF174Q15697 407 aa17.05■□□□□ 0.32
CCDC142-205ENST00000472962 C1orf228Q6PIY5 440 aa17.05■□□□□ 0.32
CCDC142-205ENST00000472962 ZNF687Q8N1G0 1237 aa17.05■□□□□ 0.32
CCDC142-205ENST00000472962 C18orf25Q96B23 403 aaPredicted RBP17.05■□□□□ 0.32
CCDC142-205ENST00000472962 TBC1D32Q96NH3 1257 aa17.05■□□□□ 0.32
CCDC142-205ENST00000472962 PGLYRP2Q96PD5 576 aa17.05■□□□□ 0.32
CCDC142-205ENST00000472962 CEP72Q9P209 647 aa17.05■□□□□ 0.32
CCDC142-205ENST00000472962 AFF4Q9UHB7 1163 aaKnown RBP17.05■□□□□ 0.32
CCDC142-205ENST00000472962 CHD8Q9HCK8 2581 aa17.04■□□□□ 0.32
CCDC142-205ENST00000472962 A0A1W2PRU2 124 aa17.04■□□□□ 0.32
CCDC142-205ENST00000472962 OR52Z1P0C646 297 aa17.04■□□□□ 0.32
CCDC142-205ENST00000472962 PTGDRQ13258 359 aa17.04■□□□□ 0.32
CCDC142-205ENST00000472962 DMP1Q13316 513 aaPredicted RBP17.04■□□□□ 0.32
CCDC142-205ENST00000472962 PLD1Q13393 1074 aa17.04■□□□□ 0.32
CCDC142-205ENST00000472962 GNL2Q13823 731 aaKnown RBP17.04■□□□□ 0.32
CCDC142-205ENST00000472962 RNF19BQ6ZMZ0 732 aa17.04■□□□□ 0.32
CCDC142-205ENST00000472962 HAUS6Q7Z4H7 955 aa17.04■□□□□ 0.32
CCDC142-205ENST00000472962 USP37Q86T82 979 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms