RNA–Protein interactions for RNA: ENST00000460264.5

COL5A1-203, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 913 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-203ENST00000460264 GET4Q7L5D6 327 aaPredicted RBP20.57■□□□□ 0.88
COL5A1-203ENST00000460264 KCNK12Q9HB15 430 aa20.57■□□□□ 0.88
COL5A1-203ENST00000460264 WDFY4Q6ZS81 3184 aa20.56■□□□□ 0.88
COL5A1-203ENST00000460264 H7C4K7 107 aa20.56■□□□□ 0.88
COL5A1-203ENST00000460264 CCL16O15467 120 aa20.56■□□□□ 0.88
COL5A1-203ENST00000460264 CUTAO60888 179 aa20.56■□□□□ 0.88
COL5A1-203ENST00000460264 POU2F2P09086 479 aa20.56■□□□□ 0.88
COL5A1-203ENST00000460264 ACOT2P49753 483 aa20.56■□□□□ 0.88
COL5A1-203ENST00000460264 CASP5P51878 434 aa20.56■□□□□ 0.88
COL5A1-203ENST00000460264 KCNA1Q09470 495 aa20.56■□□□□ 0.88
COL5A1-203ENST00000460264 PKP1Q13835 747 aa20.56■□□□□ 0.88
COL5A1-203ENST00000460264 E2F4Q16254 413 aa20.56■□□□□ 0.88
COL5A1-203ENST00000460264 UVSSAQ2YD98 709 aa20.56■□□□□ 0.88
COL5A1-203ENST00000460264 ADALQ6DHV7 355 aa20.56■□□□□ 0.88
COL5A1-203ENST00000460264 JADE1Q6IE81 842 aa20.56■□□□□ 0.88
COL5A1-203ENST00000460264 RTL10Q7L3V2 364 aa20.56■□□□□ 0.88
COL5A1-203ENST00000460264 GRASPQ7Z6J2 395 aaPredicted RBP20.56■□□□□ 0.88
COL5A1-203ENST00000460264 SUGP1Q8IWZ8 645 aaKnown RBP20.56■□□□□ 0.88
COL5A1-203ENST00000460264 CD302Q8IX05 232 aa20.56■□□□□ 0.88
COL5A1-203ENST00000460264 APPL2Q8NEU8 664 aa20.56■□□□□ 0.88
COL5A1-203ENST00000460264 ZNF461Q8TAF7 563 aa20.56■□□□□ 0.88
COL5A1-203ENST00000460264 FAM122AQ96E09 287 aa20.56■□□□□ 0.88
COL5A1-203ENST00000460264 FAM212AQ96EL1 285 aa20.56■□□□□ 0.88
COL5A1-203ENST00000460264 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.56■□□□□ 0.88
COL5A1-203ENST00000460264 IGSF9Q9P2J2 1179 aa20.56■□□□□ 0.88
COL5A1-203ENST00000460264 FBXL5Q9UKA1 691 aa20.56■□□□□ 0.88
COL5A1-203ENST00000460264 AGO2Q9UKV8 859 aaKnown RBP20.56■□□□□ 0.88
COL5A1-203ENST00000460264 PCDHB8Q9UN66 801 aa20.56■□□□□ 0.88
COL5A1-203ENST00000460264 SCN1AP35498 2009 aa20.55■□□□□ 0.88
COL5A1-203ENST00000460264 WDR27A2RRH5 827 aa20.55■□□□□ 0.88
COL5A1-203ENST00000460264 M0QZQ0 153 aa20.55■□□□□ 0.88
COL5A1-203ENST00000460264 XYLBO75191 536 aa20.55■□□□□ 0.88
COL5A1-203ENST00000460264 ABLIM3O94929 683 aa20.55■□□□□ 0.88
COL5A1-203ENST00000460264 GCNT3O95395 438 aa20.55■□□□□ 0.88
COL5A1-203ENST00000460264 PDGFBP01127 241 aaPredicted RBP20.55■□□□□ 0.88
COL5A1-203ENST00000460264 NFICP08651 508 aa20.55■□□□□ 0.88
COL5A1-203ENST00000460264 ADSSP30520 456 aa20.55■□□□□ 0.88
COL5A1-203ENST00000460264 AARSP49588 968 aaKnown RBP eCLIP20.55■□□□□ 0.88
COL5A1-203ENST00000460264 NTHL1P78549 312 aa20.55■□□□□ 0.88
COL5A1-203ENST00000460264 TDGQ13569 410 aa20.55■□□□□ 0.88
COL5A1-203ENST00000460264 FOXD4L6Q3SYB3 417 aaPredicted RBP20.55■□□□□ 0.88
COL5A1-203ENST00000460264 CTXN3Q4LDR2 81 aa20.55■□□□□ 0.88
COL5A1-203ENST00000460264 L1TD1Q5T7N2 865 aaKnown RBP20.55■□□□□ 0.88
COL5A1-203ENST00000460264 SPATA1Q5VX52 437 aa20.55■□□□□ 0.88
COL5A1-203ENST00000460264 ZNF280DQ6N043 979 aa20.55■□□□□ 0.88
COL5A1-203ENST00000460264 FOXD4L3Q6VB84 417 aaPredicted RBP20.55■□□□□ 0.88
COL5A1-203ENST00000460264 FGFBP2Q9BYJ0 223 aa20.55■□□□□ 0.88
COL5A1-203ENST00000460264 KCNH6Q9H252 994 aa20.55■□□□□ 0.88
COL5A1-203ENST00000460264 TNMDQ9H2S6 317 aa20.55■□□□□ 0.88
COL5A1-203ENST00000460264 PANK4Q9NVE7 773 aa20.55■□□□□ 0.88
COL5A1-203ENST00000460264 POLIQ9UNA4 740 aa20.55■□□□□ 0.88
COL5A1-203ENST00000460264 PPEF2O14830 753 aa20.54■□□□□ 0.88
COL5A1-203ENST00000460264 LAMP2P13473 410 aa20.54■□□□□ 0.88
COL5A1-203ENST00000460264 FSHRP23945 695 aa20.54■□□□□ 0.88
COL5A1-203ENST00000460264 ARPP19P56211 112 aa20.54■□□□□ 0.88
COL5A1-203ENST00000460264 TMEM132DQ14C87 1099 aa20.54■□□□□ 0.88
COL5A1-203ENST00000460264 SHC4Q6S5L8 630 aa20.54■□□□□ 0.88
COL5A1-203ENST00000460264 SPRYD3Q8NCJ5 442 aa20.54■□□□□ 0.88
COL5A1-203ENST00000460264 BEST2Q8NFU1 509 aa20.54■□□□□ 0.88
COL5A1-203ENST00000460264 POMGNT1Q8WZA1 660 aa20.54■□□□□ 0.88
COL5A1-203ENST00000460264 ACCSQ96QU6 501 aa20.54■□□□□ 0.88
COL5A1-203ENST00000460264 CUEDC2Q9H467 287 aa20.54■□□□□ 0.88
COL5A1-203ENST00000460264 ASB7Q9H672 318 aa20.54■□□□□ 0.88
COL5A1-203ENST00000460264 KBTBD4Q9NVX7 518 aa20.54■□□□□ 0.88
COL5A1-203ENST00000460264 DUSP12Q9UNI6 340 aa20.54■□□□□ 0.88
COL5A1-203ENST00000460264 EXOC7Q9UPT5 735 aa20.54■□□□□ 0.88
COL5A1-203ENST00000460264 DERAQ9Y315 318 aa20.54■□□□□ 0.88
COL5A1-203ENST00000460264 TCHHQ07283 1943 aa20.54■□□□□ 0.88
COL5A1-203ENST00000460264 ARHGEF37A1IGU5 675 aa20.53■□□□□ 0.88
COL5A1-203ENST00000460264 ATF2P15336 505 aa20.53■□□□□ 0.88
COL5A1-203ENST00000460264 VCPP55072 806 aaKnown RBP20.53■□□□□ 0.88
COL5A1-203ENST00000460264 ALCAMQ13740 583 aa20.53■□□□□ 0.88
COL5A1-203ENST00000460264 POSTNQ15063 836 aa20.53■□□□□ 0.88
COL5A1-203ENST00000460264 CRELD2Q6UXH1 353 aaPredicted RBP20.53■□□□□ 0.88
COL5A1-203ENST00000460264 KCNG4Q8TDN1 519 aa20.53■□□□□ 0.88
COL5A1-203ENST00000460264 RSAD2Q8WXG1 361 aa20.53■□□□□ 0.88
COL5A1-203ENST00000460264 DHX58Q96C10 678 aa20.53■□□□□ 0.88
COL5A1-203ENST00000460264 HCFC1R1Q9NWW0 138 aa20.53■□□□□ 0.88
COL5A1-203ENST00000460264 C2CD2Q9Y426 696 aa20.53■□□□□ 0.88
COL5A1-203ENST00000460264 PCDHB13Q9Y5F0 798 aa20.53■□□□□ 0.88
COL5A1-203ENST00000460264 PRRG1O14668 218 aa20.52■□□□□ 0.88
COL5A1-203ENST00000460264 POU5F1Q01860 360 aaKnown RBP20.52■□□□□ 0.88
COL5A1-203ENST00000460264 YWHAHQ04917 246 aaPredicted RBP20.52■□□□□ 0.88
COL5A1-203ENST00000460264 TPGS2Q68CL5 300 aa20.52■□□□□ 0.88
COL5A1-203ENST00000460264 CCDC65Q8IXS2 484 aa20.52■□□□□ 0.88
COL5A1-203ENST00000460264 TCEAL8Q8IYN2 117 aa20.52■□□□□ 0.88
COL5A1-203ENST00000460264 TRIM9Q9C026 710 aa20.52■□□□□ 0.88
COL5A1-203ENST00000460264 ZFP37Q9Y6Q3 630 aaPredicted RBP20.52■□□□□ 0.88
COL5A1-203ENST00000460264 ANO9A1A5B4 782 aa20.51■□□□□ 0.87
COL5A1-203ENST00000460264 ANHXE9PGG2 379 aa20.51■□□□□ 0.87
COL5A1-203ENST00000460264 OAZ2O95190 189 aa20.51■□□□□ 0.87
COL5A1-203ENST00000460264 ELF1P32519 619 aa20.51■□□□□ 0.87
COL5A1-203ENST00000460264 LILRA4P59901 499 aa20.51■□□□□ 0.87
COL5A1-203ENST00000460264 HTR4Q13639 388 aa20.51■□□□□ 0.87
COL5A1-203ENST00000460264 PABPC1LQ4VXU2 614 aaKnown RBP20.51■□□□□ 0.87
COL5A1-203ENST00000460264 IER5LQ5T953 404 aa20.51■□□□□ 0.87
COL5A1-203ENST00000460264 C9orf57Q5W0N0 161 aa20.51■□□□□ 0.87
COL5A1-203ENST00000460264 ATL3Q6DD88 541 aa20.51■□□□□ 0.87
COL5A1-203ENST00000460264 IQUBQ8NA54 791 aa20.51■□□□□ 0.87
COL5A1-203ENST00000460264 NXPE3Q969Y0 559 aa20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms