RNA–Protein interactions for RNA: ENST00000440705.6

VRK2-207, Transcript of vaccinia related kinase 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VRK2, Length 1,676 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-207ENST00000440705 RAB27AP51159 221 aa21.69■■□□□ 1.06
VRK2-207ENST00000440705 VAV2P52735 878 aa21.69■■□□□ 1.06
VRK2-207ENST00000440705 LBX1P52954 281 aa21.69■■□□□ 1.06
VRK2-207ENST00000440705 C10orf76Q5T2E6 689 aa21.69■■□□□ 1.06
VRK2-207ENST00000440705 SCARA3Q6AZY7 606 aa21.69■■□□□ 1.06
VRK2-207ENST00000440705 BEST2Q8NFU1 509 aa21.69■■□□□ 1.06
VRK2-207ENST00000440705 CXorf38Q8TB03 319 aa21.69■■□□□ 1.06
VRK2-207ENST00000440705 U2AF1L4Q8WU68 220 aaKnown RBP21.69■■□□□ 1.06
VRK2-207ENST00000440705 ARID3AQ99856 593 aa21.69■■□□□ 1.06
VRK2-207ENST00000440705 RNF39Q9H2S5 420 aa21.69■■□□□ 1.06
VRK2-207ENST00000440705 CD4P01730 458 aa21.69■■□□□ 1.06
VRK2-207ENST00000440705 KRT5P13647 590 aa21.69■■□□□ 1.06
VRK2-207ENST00000440705 KCNE1P15382 129 aa21.69■■□□□ 1.06
VRK2-207ENST00000440705 BPIFB4P59827 614 aa21.69■■□□□ 1.06
VRK2-207ENST00000440705 TRAF7Q6Q0C0 670 aa21.69■■□□□ 1.06
VRK2-207ENST00000440705 ZMAT2Q96NC0 199 aaKnown RBP21.69■■□□□ 1.06
VRK2-207ENST00000440705 OSBPL7Q9BZF2 842 aa21.69■■□□□ 1.06
VRK2-207ENST00000440705 TSGA10Q9BZW7 698 aa21.69■■□□□ 1.06
VRK2-207ENST00000440705 VRTNQ9H8Y1 702 aa21.69■■□□□ 1.06
VRK2-207ENST00000440705 UBQLN1Q9UMX0 589 aaKnown RBP21.69■■□□□ 1.06
VRK2-207ENST00000440705 SMIM28A0A1B0GU29 152 aa21.68■■□□□ 1.06
VRK2-207ENST00000440705 TLR3O15455 904 aaKnown RBP21.68■■□□□ 1.06
VRK2-207ENST00000440705 KRT86O43790 486 aa21.68■■□□□ 1.06
VRK2-207ENST00000440705 ZNF623O75123 536 aa21.68■■□□□ 1.06
VRK2-207ENST00000440705 SELPP16109 830 aa21.68■■□□□ 1.06
VRK2-207ENST00000440705 TNFAIP3P21580 790 aa21.68■■□□□ 1.06
VRK2-207ENST00000440705 DSC3Q14574 896 aa21.68■■□□□ 1.06
VRK2-207ENST00000440705 ZNF667Q5HYK9 610 aa21.68■■□□□ 1.06
VRK2-207ENST00000440705 AGPAT1Q99943 283 aa21.68■■□□□ 1.06
VRK2-207ENST00000440705 SYT11Q9BT88 431 aa21.68■■□□□ 1.06
VRK2-207ENST00000440705 KLK14Q9P0G3 267 aa21.68■■□□□ 1.06
VRK2-207ENST00000440705 AGAP1Q9UPQ3 857 aa21.68■■□□□ 1.06
VRK2-207ENST00000440705 UMODL1Q5DID0 1318 aa21.67■■□□□ 1.06
VRK2-207ENST00000440705 STAU1O95793 577 aaKnown RBP21.67■■□□□ 1.06
VRK2-207ENST00000440705 SKIP12755 728 aa21.67■■□□□ 1.06
VRK2-207ENST00000440705 ITGA4P13612 1032 aa21.67■■□□□ 1.06
VRK2-207ENST00000440705 P4HA1P13674 534 aa21.67■■□□□ 1.06
VRK2-207ENST00000440705 ACO1P21399 889 aaKnown RBP21.67■■□□□ 1.06
VRK2-207ENST00000440705 POLR2BP30876 1174 aaKnown RBP21.67■■□□□ 1.06
VRK2-207ENST00000440705 YWHAEP62258 255 aaKnown RBP21.67■■□□□ 1.06
VRK2-207ENST00000440705 KIF5AQ12840 1032 aa21.67■■□□□ 1.06
VRK2-207ENST00000440705 MRPL10Q7Z7H8 261 aaKnown RBP21.67■■□□□ 1.06
VRK2-207ENST00000440705 NAGPAQ9UK23 515 aa21.67■■□□□ 1.06
VRK2-207ENST00000440705 CNTN6Q9UQ52 1028 aa21.67■■□□□ 1.06
VRK2-207ENST00000440705 PCDHB4Q9Y5E5 795 aa21.67■■□□□ 1.06
VRK2-207ENST00000440705 ARHGAP25P42331 645 aa21.66■■□□□ 1.06
VRK2-207ENST00000440705 PDE6CP51160 858 aa21.66■■□□□ 1.06
VRK2-207ENST00000440705 ETF1P62495 437 aaKnown RBP21.66■■□□□ 1.06
VRK2-207ENST00000440705 MYO1EQ12965 1108 aa21.66■■□□□ 1.06
VRK2-207ENST00000440705 NAB2Q15742 525 aa21.66■■□□□ 1.06
VRK2-207ENST00000440705 WDR72Q3MJ13 1102 aa21.66■■□□□ 1.06
VRK2-207ENST00000440705 CCDC122Q5T0U0 273 aa21.66■■□□□ 1.06
VRK2-207ENST00000440705 ALKBH5Q6P6C2 394 aaKnown RBP21.66■■□□□ 1.06
VRK2-207ENST00000440705 SLC39A5Q6ZMH5 540 aa21.66■■□□□ 1.06
VRK2-207ENST00000440705 LRRC8DQ7L1W4 858 aa21.66■■□□□ 1.06
VRK2-207ENST00000440705 SLC30A5Q8TAD4 765 aa21.66■■□□□ 1.06
VRK2-207ENST00000440705 EPS8L1Q8TE68 723 aa21.66■■□□□ 1.06
VRK2-207ENST00000440705 HPDLQ96IR7 371 aa21.66■■□□□ 1.06
VRK2-207ENST00000440705 CXCL16Q9H2A7 254 aa21.66■■□□□ 1.06
VRK2-207ENST00000440705 PDCD11Q14690 1871 aaKnown RBP21.66■■□□□ 1.06
VRK2-207ENST00000440705 A0A0U1RQF3 1178 aa21.66■■□□□ 1.06
VRK2-207ENST00000440705 A0A0U1RQJ8 604 aa21.66■■□□□ 1.06
VRK2-207ENST00000440705 PITPNM1O00562 1244 aa21.66■■□□□ 1.06
VRK2-207ENST00000440705 DDX3XO00571 662 aaKnown RBP eCLIP21.66■■□□□ 1.062e-11■□□□□ 11.2
VRK2-207ENST00000440705 KIF5CO60282 957 aa21.66■■□□□ 1.06
VRK2-207ENST00000440705 CYP11B1P15538 503 aa21.66■■□□□ 1.06
VRK2-207ENST00000440705 FAM43BQ6ZT52 329 aaPredicted RBP21.66■■□□□ 1.06
VRK2-207ENST00000440705 ANKRD33Q7Z3H0 272 aa21.66■■□□□ 1.06
VRK2-207ENST00000440705 SLC47A2Q86VL8 602 aa21.66■■□□□ 1.06
VRK2-207ENST00000440705 GLYCTKQ8IVS8 523 aa21.66■■□□□ 1.06
VRK2-207ENST00000440705 ATRIPQ8WXE1 791 aa21.66■■□□□ 1.06
VRK2-207ENST00000440705 ADAM2Q99965 735 aa21.66■■□□□ 1.06
VRK2-207ENST00000440705 NXF1Q9UBU9 619 aaKnown RBP21.66■■□□□ 1.06
VRK2-207ENST00000440705 GIT1Q9Y2X7 761 aa21.66■■□□□ 1.06
VRK2-207ENST00000440705 MGEA5O60502 916 aa21.65■■□□□ 1.06
VRK2-207ENST00000440705 CYP3A5P20815 502 aa21.65■■□□□ 1.06
VRK2-207ENST00000440705 ASPAP45381 313 aa21.65■■□□□ 1.06
VRK2-207ENST00000440705 MNX1P50219 401 aaPredicted RBP21.65■■□□□ 1.06
VRK2-207ENST00000440705 GUCY2FP51841 1108 aa21.65■■□□□ 1.06
VRK2-207ENST00000440705 GLRA4Q5JXX5 417 aa21.65■■□□□ 1.06
VRK2-207ENST00000440705 TMEM270Q6UE05 265 aa21.65■■□□□ 1.06
VRK2-207ENST00000440705 NOCTQ9UK39 431 aaKnown RBP21.65■■□□□ 1.06
VRK2-207ENST00000440705 GTF3C5Q9Y5Q8 519 aaPredicted RBP21.65■■□□□ 1.06
VRK2-207ENST00000440705 PJA2O43164 708 aa21.64■■□□□ 1.05
VRK2-207ENST00000440705 PQBP1O60828 265 aaKnown RBP21.64■■□□□ 1.05
VRK2-207ENST00000440705 GJA8P48165 433 aa21.64■■□□□ 1.05
VRK2-207ENST00000440705 MBTPS1Q14703 1052 aa21.64■■□□□ 1.05
VRK2-207ENST00000440705 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.64■■□□□ 1.05
VRK2-207ENST00000440705 NOP9Q86U38 636 aaKnown RBP21.64■■□□□ 1.05
VRK2-207ENST00000440705 ZNF677Q86XU0 584 aa21.64■■□□□ 1.05
VRK2-207ENST00000440705 RPUSD2Q8IZ73 545 aaKnown RBP21.64■■□□□ 1.05
VRK2-207ENST00000440705 LRRC52Q8N7C0 313 aa21.64■■□□□ 1.05
VRK2-207ENST00000440705 UBR7Q8N806 425 aa21.64■■□□□ 1.05
VRK2-207ENST00000440705 ANKLE1Q8NAG6 615 aa21.64■■□□□ 1.05
VRK2-207ENST00000440705 LNX1Q8TBB1 728 aaPredicted RBP21.64■■□□□ 1.05
VRK2-207ENST00000440705 C18orf25Q96B23 403 aaPredicted RBP21.64■■□□□ 1.05
VRK2-207ENST00000440705 PGBD4Q96DM1 585 aa21.64■■□□□ 1.05
VRK2-207ENST00000440705 BCO2Q9BYV7 579 aa21.64■■□□□ 1.05
VRK2-207ENST00000440705 LACRTQ9GZZ8 138 aa21.64■■□□□ 1.05
VRK2-207ENST00000440705 FAM124BQ9H5Z6 455 aaPredicted RBP21.64■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms