RNA–Protein interactions for RNA: ENST00000369733.7

COL17A1-202, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL17A1, Length 5,488 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-202ENST00000369733 SERPINB9P50453 376 aa16.74■□□□□ 0.27
COL17A1-202ENST00000369733 MTM1Q13496 603 aa16.74■□□□□ 0.27
COL17A1-202ENST00000369733 TTC39BQ5VTQ0 682 aaPredicted RBP16.74■□□□□ 0.27
COL17A1-202ENST00000369733 METTL23Q86XA0 190 aa16.74■□□□□ 0.27
COL17A1-202ENST00000369733 TMA16Q96EY4 203 aaKnown RBP16.74■□□□□ 0.27
COL17A1-202ENST00000369733 HIC2Q96JB3 615 aa16.74■□□□□ 0.27
COL17A1-202ENST00000369733 NBPF3Q9H094 633 aa16.74■□□□□ 0.27
COL17A1-202ENST00000369733 CDC42EP4Q9H3Q1 356 aaKnown RBP16.74■□□□□ 0.27
COL17A1-202ENST00000369733 FRMPD1Q5SYB0 1578 aa16.74■□□□□ 0.27
COL17A1-202ENST00000369733 SLC37A4O43826 429 aa16.74■□□□□ 0.27
COL17A1-202ENST00000369733 ZFXP17010 805 aaPredicted RBP16.74■□□□□ 0.27
COL17A1-202ENST00000369733 ARHGDIAP52565 204 aa16.74■□□□□ 0.27
COL17A1-202ENST00000369733 SESN2P58004 480 aaPredicted RBP16.74■□□□□ 0.27
COL17A1-202ENST00000369733 NKX1-1Q15270 411 aaPredicted RBP16.74■□□□□ 0.27
COL17A1-202ENST00000369733 FLAD1Q8NFF5 587 aa16.74■□□□□ 0.27
COL17A1-202ENST00000369733 DCLRE1BQ9H816 532 aa16.74■□□□□ 0.27
COL17A1-202ENST00000369733 KCND2Q9NZV8 630 aa16.74■□□□□ 0.27
COL17A1-202ENST00000369733 NARFQ9UHQ1 456 aa16.74■□□□□ 0.27
COL17A1-202ENST00000369733 SALL1Q9NSC2 1324 aa16.74■□□□□ 0.27
COL17A1-202ENST00000369733 KDM1AO60341 852 aa16.74■□□□□ 0.27
COL17A1-202ENST00000369733 PAX7P23759 505 aa16.74■□□□□ 0.27
COL17A1-202ENST00000369733 PRAMEP78395 509 aa16.74■□□□□ 0.27
COL17A1-202ENST00000369733 TTMPQ5BVD1 217 aa16.74■□□□□ 0.27
COL17A1-202ENST00000369733 CENPPQ6IPU0 288 aa16.74■□□□□ 0.27
COL17A1-202ENST00000369733 CREG2Q8IUH2 290 aa16.74■□□□□ 0.27
COL17A1-202ENST00000369733 WHRNQ9P202 907 aa16.74■□□□□ 0.27
COL17A1-202ENST00000369733 A0A0U1RQJ8 604 aa16.73■□□□□ 0.27
COL17A1-202ENST00000369733 RPS6KA4O75676 772 aa16.73■□□□□ 0.27
COL17A1-202ENST00000369733 ASNSP08243 561 aa16.73■□□□□ 0.27
COL17A1-202ENST00000369733 RPA1P27694 616 aa16.73■□□□□ 0.27
COL17A1-202ENST00000369733 PIGHQ14442 188 aaPredicted RBP16.73■□□□□ 0.27
COL17A1-202ENST00000369733 CHI3L2Q15782 390 aa16.73■□□□□ 0.27
COL17A1-202ENST00000369733 ZNF571Q7Z3V5 609 aaPredicted RBP16.73■□□□□ 0.27
COL17A1-202ENST00000369733 LZTS1Q9Y250 596 aa16.73■□□□□ 0.27
COL17A1-202ENST00000369733 USP32Q8NFA0 1604 aa16.73■□□□□ 0.27
COL17A1-202ENST00000369733 FLT1P17948 1338 aa16.73■□□□□ 0.27
COL17A1-202ENST00000369733 AIM2O14862 343 aa16.73■□□□□ 0.27
COL17A1-202ENST00000369733 SPAG6O75602 509 aa16.73■□□□□ 0.27
COL17A1-202ENST00000369733 AP3M2P53677 418 aa16.73■□□□□ 0.27
COL17A1-202ENST00000369733 TBC1D23Q9NUY8 699 aa16.73■□□□□ 0.27
COL17A1-202ENST00000369733 SLC12A6Q9UHW9 1150 aa16.73■□□□□ 0.27
COL17A1-202ENST00000369733 MYO3BQ8WXR4 1341 aa16.73■□□□□ 0.27
COL17A1-202ENST00000369733 APBA3O96018 575 aa16.73■□□□□ 0.27
COL17A1-202ENST00000369733 BTKQ06187 659 aa16.73■□□□□ 0.27
COL17A1-202ENST00000369733 ZNF302Q9NR11 478 aa16.73■□□□□ 0.27
COL17A1-202ENST00000369733 P4HA2O15460 535 aa16.73■□□□□ 0.27
COL17A1-202ENST00000369733 RPS6KA5O75582 802 aa16.73■□□□□ 0.27
COL17A1-202ENST00000369733 TSTA3Q13630 321 aaPredicted RBP16.73■□□□□ 0.27
COL17A1-202ENST00000369733 ZCWPW2Q504Y3 356 aa16.73■□□□□ 0.27
COL17A1-202ENST00000369733 ATG4AQ8WYN0 398 aa16.73■□□□□ 0.27
COL17A1-202ENST00000369733 TIPINQ9BVW5 301 aa16.73■□□□□ 0.27
COL17A1-202ENST00000369733 ERCC6L2Q5T890 1561 aa16.73■□□□□ 0.27
COL17A1-202ENST00000369733 A0A0A6YYK5 440 aaPredicted RBP16.73■□□□□ 0.27
COL17A1-202ENST00000369733 RAD17O75943 681 aa16.73■□□□□ 0.27
COL17A1-202ENST00000369733 ZCCHC18P0CG32 403 aa16.73■□□□□ 0.27
COL17A1-202ENST00000369733 ATXN3P54252 364 aaPredicted RBP16.73■□□□□ 0.27
COL17A1-202ENST00000369733 ERVK-9P63128 1117 aa16.73■□□□□ 0.27
COL17A1-202ENST00000369733 TNFAIP2Q03169 654 aa16.73■□□□□ 0.27
COL17A1-202ENST00000369733 CATSPER3Q86XQ3 398 aa16.73■□□□□ 0.27
COL17A1-202ENST00000369733 CLEC10AQ8IUN9 316 aa16.73■□□□□ 0.27
COL17A1-202ENST00000369733 RBBP8NLQ8NC74 664 aaPredicted RBP16.73■□□□□ 0.27
COL17A1-202ENST00000369733 ZKSCAN4Q969J2 545 aaPredicted RBP16.73■□□□□ 0.27
COL17A1-202ENST00000369733 SH2D3AQ9BRG2 576 aa16.73■□□□□ 0.27
COL17A1-202ENST00000369733 TLR10Q9BXR5 811 aa16.73■□□□□ 0.27
COL17A1-202ENST00000369733 CPSF3Q9UKF6 684 aaKnown RBP16.73■□□□□ 0.27
COL17A1-202ENST00000369733 GTF3C4Q9UKN8 822 aa16.73■□□□□ 0.27
COL17A1-202ENST00000369733 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.72■□□□□ 0.27
COL17A1-202ENST00000369733 TDRD3Q9H7E2 651 aaKnown RBP16.72■□□□□ 0.27
COL17A1-202ENST00000369733 C15orf41Q9Y2V0 281 aa16.72■□□□□ 0.27
COL17A1-202ENST00000369733 PCDHB2Q9Y5E7 798 aa16.72■□□□□ 0.27
COL17A1-202ENST00000369733 GPSM2P81274 684 aa16.72■□□□□ 0.27
COL17A1-202ENST00000369733 NSUN2Q08J23 767 aaKnown RBP eCLIP16.72■□□□□ 0.27
COL17A1-202ENST00000369733 DUOXA2Q1HG44 320 aa16.72■□□□□ 0.27
COL17A1-202ENST00000369733 C16orf86Q6ZW13 317 aa16.72■□□□□ 0.27
COL17A1-202ENST00000369733 TMC3Q7Z5M5 1100 aa16.72■□□□□ 0.27
COL17A1-202ENST00000369733 ARID3BQ8IVW6 561 aaPredicted RBP16.72■□□□□ 0.27
COL17A1-202ENST00000369733 PPIL6Q8IXY8 311 aa16.72■□□□□ 0.27
COL17A1-202ENST00000369733 CLMNQ96JQ2 1002 aa16.72■□□□□ 0.27
COL17A1-202ENST00000369733 MRPL4Q9BYD3 311 aaKnown RBP16.72■□□□□ 0.27
COL17A1-202ENST00000369733 OSGEPQ9NPF4 335 aa16.72■□□□□ 0.27
COL17A1-202ENST00000369733 SLC5A4Q9NY91 659 aa16.72■□□□□ 0.27
COL17A1-202ENST00000369733 CHD1O14646 1710 aa16.72■□□□□ 0.27
COL17A1-202ENST00000369733 MAP4P27816 1152 aaKnown RBP16.72■□□□□ 0.27
COL17A1-202ENST00000369733 ACTR2P61160 394 aa16.72■□□□□ 0.27
COL17A1-202ENST00000369733 TBCCQ15814 346 aa16.72■□□□□ 0.27
COL17A1-202ENST00000369733 RNF135Q8IUD6 432 aa16.72■□□□□ 0.27
COL17A1-202ENST00000369733 FUKQ8N0W3 1084 aa16.72■□□□□ 0.27
COL17A1-202ENST00000369733 CCT7Q99832 543 aa16.72■□□□□ 0.27
COL17A1-202ENST00000369733 UNC45AQ9H3U1 944 aa16.72■□□□□ 0.27
COL17A1-202ENST00000369733 PPME1Q9Y570 386 aa16.72■□□□□ 0.27
COL17A1-202ENST00000369733 ITGA4P13612 1032 aa16.72■□□□□ 0.27
COL17A1-202ENST00000369733 CYP11B2P19099 503 aa16.72■□□□□ 0.27
COL17A1-202ENST00000369733 FAM217BQ9NTX9 383 aaPredicted RBP16.72■□□□□ 0.27
COL17A1-202ENST00000369733 EPC2Q52LR7 807 aa16.71■□□□□ 0.27
COL17A1-202ENST00000369733 MTHFD1LQ6UB35 978 aa16.71■□□□□ 0.27
COL17A1-202ENST00000369733 FAM167AQ96KS9 214 aa16.71■□□□□ 0.27
COL17A1-202ENST00000369733 FAM111AQ96PZ2 611 aa16.71■□□□□ 0.27
COL17A1-202ENST00000369733 PAPOLBQ9NRJ5 636 aaKnown RBP16.71■□□□□ 0.27
COL17A1-202ENST00000369733 PKD2L2Q9NZM6 624 aa16.71■□□□□ 0.27
COL17A1-202ENST00000369733 LOC100653049A0A140TA62 436 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms