RNA–Protein interactions for RNA: ENST00000369462.5

BRCC3-204, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,846 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-204ENST00000369462 UBE2TQ9NPD8 197 aaPredicted RBP11.78□□□□□ -0.52
BRCC3-204ENST00000369462 CACNG4Q9UBN1 327 aa11.78□□□□□ -0.52
BRCC3-204ENST00000369462 LUC7L2Q9Y383 392 aaKnown RBP11.78□□□□□ -0.52
BRCC3-204ENST00000369462 PPEF2O14830 753 aa11.78□□□□□ -0.52
BRCC3-204ENST00000369462 ASS1P00966 412 aaKnown RBP11.78□□□□□ -0.52
BRCC3-204ENST00000369462 GATMP50440 423 aa11.78□□□□□ -0.52
BRCC3-204ENST00000369462 NOP14P78316 857 aaKnown RBP11.78□□□□□ -0.52
BRCC3-204ENST00000369462 RAPGEF1Q13905 1077 aa11.78□□□□□ -0.52
BRCC3-204ENST00000369462 ARID5BQ14865 1188 aa11.78□□□□□ -0.52
BRCC3-204ENST00000369462 NAB2Q15742 525 aa11.78□□□□□ -0.52
BRCC3-204ENST00000369462 NOMO2Q5JPE7 1267 aa11.78□□□□□ -0.52
BRCC3-204ENST00000369462 XYLT2Q9H1B5 865 aa11.78□□□□□ -0.52
BRCC3-204ENST00000369462 APOBEC3GQ9HC16 384 aaKnown RBP11.78□□□□□ -0.52
BRCC3-204ENST00000369462 CAPN11Q9UMQ6 739 aa11.78□□□□□ -0.52
BRCC3-204ENST00000369462 FGBP02675 491 aa11.78□□□□□ -0.52
BRCC3-204ENST00000369462 CYP3A5P20815 502 aa11.78□□□□□ -0.52
BRCC3-204ENST00000369462 KRT9P35527 623 aa11.78□□□□□ -0.52
BRCC3-204ENST00000369462 EPHB4P54760 987 aa11.78□□□□□ -0.52
BRCC3-204ENST00000369462 DEFB103AP81534 67 aa11.78□□□□□ -0.52
BRCC3-204ENST00000369462 ZNF699Q32M78 642 aa11.78□□□□□ -0.52
BRCC3-204ENST00000369462 WDR72Q3MJ13 1102 aa11.78□□□□□ -0.52
BRCC3-204ENST00000369462 C9orf57Q5W0N0 161 aa11.78□□□□□ -0.52
BRCC3-204ENST00000369462 IQCEQ6IPM2 695 aa11.78□□□□□ -0.52
BRCC3-204ENST00000369462 NPAS4Q8IUM7 802 aa11.78□□□□□ -0.52
BRCC3-204ENST00000369462 URGCPQ8TCY9 931 aa11.78□□□□□ -0.52
BRCC3-204ENST00000369462 SPOCK2Q92563 424 aa11.78□□□□□ -0.52
BRCC3-204ENST00000369462 IQCDQ96DY2 449 aa11.78□□□□□ -0.52
BRCC3-204ENST00000369462 HPDLQ96IR7 371 aa11.78□□□□□ -0.52
BRCC3-204ENST00000369462 LBHD1Q9BQE6 289 aaPredicted RBP11.78□□□□□ -0.52
BRCC3-204ENST00000369462 CEP72Q9P209 647 aa11.78□□□□□ -0.52
BRCC3-204ENST00000369462 DNAJC12Q9UKB3 198 aa11.78□□□□□ -0.52
BRCC3-204ENST00000369462 AJAP1Q9UKB5 411 aaPredicted RBP11.78□□□□□ -0.52
BRCC3-204ENST00000369462 NUB1Q9Y5A7 615 aa11.78□□□□□ -0.52
BRCC3-204ENST00000369462 RALGAPA2Q2PPJ7 1873 aa11.77□□□□□ -0.52
BRCC3-204ENST00000369462 CASTOR2A6NHX0 329 aa11.77□□□□□ -0.53
BRCC3-204ENST00000369462 ZBBXA8MT70 800 aa11.77□□□□□ -0.53
BRCC3-204ENST00000369462 AKR1B15C9JRZ8 316 aaPredicted RBP11.77□□□□□ -0.53
BRCC3-204ENST00000369462 EFCAB14O75071 495 aa11.77□□□□□ -0.53
BRCC3-204ENST00000369462 ZC3H11AO75152 810 aaKnown RBP eCLIP11.77□□□□□ -0.53
BRCC3-204ENST00000369462 WDR5P61964 334 aaKnown RBP11.77□□□□□ -0.53
BRCC3-204ENST00000369462 RNASELQ05823 741 aaKnown RBP11.77□□□□□ -0.53
BRCC3-204ENST00000369462 GRIK3Q13003 919 aa11.77□□□□□ -0.53
BRCC3-204ENST00000369462 ARHGAP44Q17R89 818 aa11.77□□□□□ -0.53
BRCC3-204ENST00000369462 FAM117BQ6P1L5 589 aa11.77□□□□□ -0.53
BRCC3-204ENST00000369462 TMCO2Q7Z6W1 182 aaPredicted RBP11.77□□□□□ -0.53
BRCC3-204ENST00000369462 ZNF397Q8NF99 534 aaPredicted RBP11.77□□□□□ -0.53
BRCC3-204ENST00000369462 RABGGTAQ92696 567 aa11.77□□□□□ -0.53
BRCC3-204ENST00000369462 KAT5Q92993 513 aa11.77□□□□□ -0.53
BRCC3-204ENST00000369462 SPAG5Q96R06 1193 aa11.77□□□□□ -0.53
BRCC3-204ENST00000369462 NXF1Q9UBU9 619 aaKnown RBP11.77□□□□□ -0.53
BRCC3-204ENST00000369462 MICAL3Q7RTP6 2002 aa11.77□□□□□ -0.53
BRCC3-204ENST00000369462 A0A1W2PQJ5 194 aa11.77□□□□□ -0.53
BRCC3-204ENST00000369462 ANO9A1A5B4 782 aa11.77□□□□□ -0.53
BRCC3-204ENST00000369462 INPPL1O15357 1258 aa11.77□□□□□ -0.53
BRCC3-204ENST00000369462 MFAP3LO75121 409 aa11.77□□□□□ -0.53
BRCC3-204ENST00000369462 AMHP03971 560 aa11.77□□□□□ -0.53
BRCC3-204ENST00000369462 ZBED6P86452 979 aa11.77□□□□□ -0.53
BRCC3-204ENST00000369462 CNGA4Q8IV77 575 aa11.77□□□□□ -0.53
BRCC3-204ENST00000369462 TC2NQ8N9U0 490 aa11.77□□□□□ -0.53
BRCC3-204ENST00000369462 TOP1MTQ969P6 601 aa11.77□□□□□ -0.53
BRCC3-204ENST00000369462 PAAF1Q9BRP4 392 aa11.77□□□□□ -0.53
BRCC3-204ENST00000369462 NAA15Q9BXJ9 866 aaKnown RBP11.77□□□□□ -0.53
BRCC3-204ENST00000369462 EDEM3Q9BZQ6 932 aa11.77□□□□□ -0.53
BRCC3-204ENST00000369462 TBC1D13Q9NVG8 400 aa11.77□□□□□ -0.53
BRCC3-204ENST00000369462 KANSL3Q9P2N6 904 aa11.77□□□□□ -0.53
BRCC3-204ENST00000369462 FBXL5Q9UKA1 691 aa11.77□□□□□ -0.53
BRCC3-204ENST00000369462 PIRO00625 290 aa11.76□□□□□ -0.53
BRCC3-204ENST00000369462 HOXA2O43364 376 aa11.76□□□□□ -0.53
BRCC3-204ENST00000369462 BAIAP3O94812 1187 aa11.76□□□□□ -0.53
BRCC3-204ENST00000369462 LRPAP1P30533 357 aa11.76□□□□□ -0.53
BRCC3-204ENST00000369462 KCNJ6P48051 423 aa11.76□□□□□ -0.53
BRCC3-204ENST00000369462 CLCNKBP51801 687 aa11.76□□□□□ -0.53
BRCC3-204ENST00000369462 GSDMDP57764 484 aa11.76□□□□□ -0.53
BRCC3-204ENST00000369462 MYO1EQ12965 1108 aa11.76□□□□□ -0.53
BRCC3-204ENST00000369462 TMEM240Q5SV17 173 aa11.76□□□□□ -0.53
BRCC3-204ENST00000369462 ZNF280BQ86YH2 543 aa11.76□□□□□ -0.53
BRCC3-204ENST00000369462 GPIHBP1Q8IV16 184 aa11.76□□□□□ -0.53
BRCC3-204ENST00000369462 BAP1Q92560 729 aa11.76□□□□□ -0.53
BRCC3-204ENST00000369462 CASD1Q96PB1 797 aa11.76□□□□□ -0.53
BRCC3-204ENST00000369462 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.76□□□□□ -0.532e-6■■■■□ 23.3
BRCC3-204ENST00000369462 TBKBP1A7MCY6 615 aa11.76□□□□□ -0.53
BRCC3-204ENST00000369462 ATICP31939 592 aa11.76□□□□□ -0.53
BRCC3-204ENST00000369462 TUSC3Q13454 348 aa11.76□□□□□ -0.53
BRCC3-204ENST00000369462 DRAP1Q14919 205 aaPredicted RBP11.76□□□□□ -0.53
BRCC3-204ENST00000369462 ZNF667Q5HYK9 610 aa11.76□□□□□ -0.53
BRCC3-204ENST00000369462 TAF4BQ92750 862 aa11.76□□□□□ -0.53
BRCC3-204ENST00000369462 KREMEN1Q96MU8 473 aa11.76□□□□□ -0.53
BRCC3-204ENST00000369462 NR2E3Q9Y5X4 410 aa11.76□□□□□ -0.53
BRCC3-204ENST00000369462 LRRC53A6NM62 1247 aa11.75□□□□□ -0.53
BRCC3-204ENST00000369462 DDHD2O94830 711 aa11.75□□□□□ -0.53
BRCC3-204ENST00000369462 PNMA6AP0CW24 399 aaPredicted RBP11.75□□□□□ -0.53
BRCC3-204ENST00000369462 RFX1P22670 979 aa11.75□□□□□ -0.53
BRCC3-204ENST00000369462 IGFBP6P24592 240 aaPredicted RBP11.75□□□□□ -0.53
BRCC3-204ENST00000369462 MFAP3P55082 362 aa11.75□□□□□ -0.53
BRCC3-204ENST00000369462 GCNT1Q02742 428 aa11.75□□□□□ -0.53
BRCC3-204ENST00000369462 PAN2Q504Q3 1202 aaKnown RBP11.75□□□□□ -0.53
BRCC3-204ENST00000369462 PSRC1Q6PGN9 363 aaPredicted RBP11.75□□□□□ -0.53
BRCC3-204ENST00000369462 SCARA5Q6ZMJ2 495 aa11.75□□□□□ -0.53
BRCC3-204ENST00000369462 LRRC52Q8N7C0 313 aa11.75□□□□□ -0.53
BRCC3-204ENST00000369462 OR8K1Q8NGG5 319 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms