RNA–Protein interactions for RNA: ENST00000359895.6

PDLIM7-203, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-203ENST00000359895 RWDD2BP57060 319 aa19.53■□□□□ 0.72
PDLIM7-203ENST00000359895 TNFAIP2Q03169 654 aa19.53■□□□□ 0.72
PDLIM7-203ENST00000359895 TRPC3Q13507 836 aa19.53■□□□□ 0.72
PDLIM7-203ENST00000359895 HLTFQ14527 1009 aaKnown RBP eCLIP19.53■□□□□ 0.72
PDLIM7-203ENST00000359895 TMEM63BQ5T3F8 832 aa19.53■□□□□ 0.72
PDLIM7-203ENST00000359895 NAA35Q5VZE5 725 aa19.53■□□□□ 0.72
PDLIM7-203ENST00000359895 MON1BQ7L1V2 547 aa19.53■□□□□ 0.72
PDLIM7-203ENST00000359895 PHF13Q86YI8 300 aaPredicted RBP19.53■□□□□ 0.72
PDLIM7-203ENST00000359895 BRI3BPQ8WY22 251 aa19.53■□□□□ 0.72
PDLIM7-203ENST00000359895 ANKRD36BP1Q96IX9 119 aa19.53■□□□□ 0.72
PDLIM7-203ENST00000359895 NIF3L1Q9GZT8 377 aa19.53■□□□□ 0.72
PDLIM7-203ENST00000359895 ANAPC7Q9UJX3 599 aa19.53■□□□□ 0.72
PDLIM7-203ENST00000359895 GOLGA8KD6RF30 607 aa19.53■□□□□ 0.72
PDLIM7-203ENST00000359895 THAP12O43422 761 aa19.53■□□□□ 0.72
PDLIM7-203ENST00000359895 PHF2O75151 1096 aa19.53■□□□□ 0.72
PDLIM7-203ENST00000359895 HOXC6P09630 235 aa19.53■□□□□ 0.72
PDLIM7-203ENST00000359895 TMOD1P28289 359 aa19.53■□□□□ 0.72
PDLIM7-203ENST00000359895 CHRNA3P32297 505 aa19.53■□□□□ 0.72
PDLIM7-203ENST00000359895 HSPA9P38646 679 aaKnown RBP19.53■□□□□ 0.72
PDLIM7-203ENST00000359895 ZNF132P52740 706 aa19.53■□□□□ 0.72
PDLIM7-203ENST00000359895 YWHAEP62258 255 aaKnown RBP19.53■□□□□ 0.72
PDLIM7-203ENST00000359895 NOMO3P69849 1222 aa19.53■□□□□ 0.72
PDLIM7-203ENST00000359895 CFAP58Q5T655 872 aa19.53■□□□□ 0.72
PDLIM7-203ENST00000359895 MAP1SQ66K74 1059 aaPredicted RBP19.53■□□□□ 0.72
PDLIM7-203ENST00000359895 EFCAB13Q8IY85 973 aa19.53■□□□□ 0.72
PDLIM7-203ENST00000359895 LINC01465Q8N7H1 131 aa19.53■□□□□ 0.72
PDLIM7-203ENST00000359895 TSEN2Q8NCE0 465 aaKnown RBP19.53■□□□□ 0.72
PDLIM7-203ENST00000359895 CPA5Q8WXQ8 436 aa19.53■□□□□ 0.72
PDLIM7-203ENST00000359895 LRRC45Q96CN5 670 aa19.53■□□□□ 0.72
PDLIM7-203ENST00000359895 FAM212AQ96EL1 285 aa19.53■□□□□ 0.72
PDLIM7-203ENST00000359895 SH3GL2Q99962 352 aa19.53■□□□□ 0.72
PDLIM7-203ENST00000359895 MTMR12Q9C0I1 747 aa19.53■□□□□ 0.72
PDLIM7-203ENST00000359895 PLEKHA4Q9H4M7 779 aa19.53■□□□□ 0.72
PDLIM7-203ENST00000359895 GBA2Q9HCG7 927 aaPredicted RBP19.53■□□□□ 0.72
PDLIM7-203ENST00000359895 MRPL47Q9HD33 250 aaKnown RBP19.53■□□□□ 0.72
PDLIM7-203ENST00000359895 CHORDC1Q9UHD1 332 aaPredicted RBP19.53■□□□□ 0.72
PDLIM7-203ENST00000359895 RASAL2Q9UJF2 1139 aa19.53■□□□□ 0.72
PDLIM7-203ENST00000359895 MTUS1Q9ULD2 1270 aa19.53■□□□□ 0.72
PDLIM7-203ENST00000359895 TTI1O43156 1089 aa19.52■□□□□ 0.71
PDLIM7-203ENST00000359895 PPFIA4O75335 1185 aa19.52■□□□□ 0.71
PDLIM7-203ENST00000359895 CST3P01034 146 aaPredicted RBP19.52■□□□□ 0.71
PDLIM7-203ENST00000359895 CALCAP01258 141 aa19.52■□□□□ 0.71
PDLIM7-203ENST00000359895 FAM153BP0C7A2 387 aa19.52■□□□□ 0.71
PDLIM7-203ENST00000359895 MYL6P60660 151 aa19.52■□□□□ 0.71
PDLIM7-203ENST00000359895 DR1Q01658 176 aa19.52■□□□□ 0.71
PDLIM7-203ENST00000359895 C1QBPQ07021 282 aaKnown RBP19.52■□□□□ 0.71
PDLIM7-203ENST00000359895 KYAT1Q16773 422 aa19.52■□□□□ 0.71
PDLIM7-203ENST00000359895 FAM153CQ494X1 144 aa19.52■□□□□ 0.71
PDLIM7-203ENST00000359895 CYFIP2Q96F07 1278 aa19.52■□□□□ 0.71
PDLIM7-203ENST00000359895 FAXDC2Q96IV6 333 aa19.52■□□□□ 0.71
PDLIM7-203ENST00000359895 BTBD6Q96KE9 485 aa19.52■□□□□ 0.71
PDLIM7-203ENST00000359895 PARK7Q99497 189 aaKnown RBP19.52■□□□□ 0.71
PDLIM7-203ENST00000359895 KATNBL1Q9H079 304 aa19.52■□□□□ 0.71
PDLIM7-203ENST00000359895 RPF1Q9H9Y2 349 aaKnown RBP19.52■□□□□ 0.71
PDLIM7-203ENST00000359895 FAM153AQ9UHL3 310 aa19.52■□□□□ 0.71
PDLIM7-203ENST00000359895 SCINQ9Y6U3 715 aa19.52■□□□□ 0.71
PDLIM7-203ENST00000359895 UMODL1Q5DID0 1318 aa19.51■□□□□ 0.71
PDLIM7-203ENST00000359895 MROH7Q68CQ1 1323 aa19.51■□□□□ 0.71
PDLIM7-203ENST00000359895 MYO1FO00160 1098 aa19.51■□□□□ 0.71
PDLIM7-203ENST00000359895 TOMM70O94826 608 aa19.51■□□□□ 0.71
PDLIM7-203ENST00000359895 MCF2P10911 925 aa19.51■□□□□ 0.71
PDLIM7-203ENST00000359895 RRM1P23921 792 aa19.51■□□□□ 0.71
PDLIM7-203ENST00000359895 MARCKSL1P49006 195 aa19.51■□□□□ 0.71
PDLIM7-203ENST00000359895 IGBP1P78318 339 aa19.51■□□□□ 0.71
PDLIM7-203ENST00000359895 PPFIA1Q13136 1202 aa19.51■□□□□ 0.71
PDLIM7-203ENST00000359895 GPR142Q7Z601 462 aa19.51■□□□□ 0.71
PDLIM7-203ENST00000359895 DPP9Q86TI2 863 aa19.51■□□□□ 0.71
PDLIM7-203ENST00000359895 THNSL1Q8IYQ7 743 aa19.51■□□□□ 0.71
PDLIM7-203ENST00000359895 AFG1LQ8WV93 481 aa19.51■□□□□ 0.71
PDLIM7-203ENST00000359895 CDT1Q9H211 546 aa19.51■□□□□ 0.71
PDLIM7-203ENST00000359895 ADAM22Q9P0K1 906 aa19.51■□□□□ 0.71
PDLIM7-203ENST00000359895 ZEB2O60315 1214 aa19.5■□□□□ 0.71
PDLIM7-203ENST00000359895 LSM8O95777 96 aaKnown RBP19.5■□□□□ 0.71
PDLIM7-203ENST00000359895 GUCY2FP51841 1108 aa19.5■□□□□ 0.71
PDLIM7-203ENST00000359895 TFAMQ00059 246 aaKnown RBP19.5■□□□□ 0.71
PDLIM7-203ENST00000359895 GRB14Q14449 540 aa19.5■□□□□ 0.71
PDLIM7-203ENST00000359895 ZNF699Q32M78 642 aa19.5■□□□□ 0.71
PDLIM7-203ENST00000359895 EEF1DP3Q658K8 133 aa19.5■□□□□ 0.71
PDLIM7-203ENST00000359895 SLC13A5Q86YT5 568 aaPredicted RBP19.5■□□□□ 0.71
PDLIM7-203ENST00000359895 IQCKQ8N0W5 287 aa19.5■□□□□ 0.71
PDLIM7-203ENST00000359895 C2orf69Q8N8R5 385 aa19.5■□□□□ 0.71
PDLIM7-203ENST00000359895 MAIP1Q8WWC4 291 aa19.5■□□□□ 0.71
PDLIM7-203ENST00000359895 FAM204AQ9H8W3 233 aa19.5■□□□□ 0.71
PDLIM7-203ENST00000359895 IFT122Q9HBG6 1241 aa19.5■□□□□ 0.71
PDLIM7-203ENST00000359895 PCYOX1Q9UHG3 505 aa19.5■□□□□ 0.71
PDLIM7-203ENST00000359895 LCMT1Q9UIC8 334 aa19.5■□□□□ 0.71
PDLIM7-203ENST00000359895 SBDSQ9Y3A5 250 aaKnown RBP eCLIP19.5■□□□□ 0.71
PDLIM7-203ENST00000359895 NR2E1Q9Y466 385 aa19.5■□□□□ 0.71
PDLIM7-203ENST00000359895 B4GALT5O43286 388 aa19.49■□□□□ 0.71
PDLIM7-203ENST00000359895 SNAI1O95863 264 aaPredicted RBP19.49■□□□□ 0.71
PDLIM7-203ENST00000359895 GJB1P08034 283 aa19.49■□□□□ 0.71
PDLIM7-203ENST00000359895 PYGMP11217 842 aa19.49■□□□□ 0.71
PDLIM7-203ENST00000359895 ECHS1P30084 290 aa19.49■□□□□ 0.71
PDLIM7-203ENST00000359895 GBP1P32455 592 aa19.49■□□□□ 0.71
PDLIM7-203ENST00000359895 ADCYAP1R1P41586 468 aa19.49■□□□□ 0.71
PDLIM7-203ENST00000359895 GYS2P54840 703 aa19.49■□□□□ 0.71
PDLIM7-203ENST00000359895 TRADDQ15628 312 aa19.49■□□□□ 0.71
PDLIM7-203ENST00000359895 CYP1B1Q16678 543 aa19.49■□□□□ 0.71
PDLIM7-203ENST00000359895 FAM110CQ1W6H9 321 aa19.49■□□□□ 0.71
PDLIM7-203ENST00000359895 GJC2Q5T442 439 aaPredicted RBP19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms