RNA–Protein interactions for RNA: ENST00000286307.5

LSM11-201, Transcript of LSM11, U7 small nuclear RNA associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM11, Length 6,584 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM11-201ENST00000286307 SYNCRIPO60506 623 aaKnown RBP20.29■□□□□ 0.84
LSM11-201ENST00000286307 FMO5P49326 533 aa20.29■□□□□ 0.84
LSM11-201ENST00000286307 CENPKQ9BS16 269 aa20.29■□□□□ 0.84
LSM11-201ENST00000286307 SNX24Q9Y343 169 aa20.29■□□□□ 0.84
LSM11-201ENST00000286307 TMEM199Q8N511 208 aa20.29■□□□□ 0.84
LSM11-201ENST00000286307 SLC25A41Q8N5S1 370 aa20.29■□□□□ 0.84
LSM11-201ENST00000286307 MAP3K14Q99558 947 aa20.29■□□□□ 0.84
LSM11-201ENST00000286307 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP20.29■□□□□ 0.84
LSM11-201ENST00000286307 SLC37A4O43826 429 aa20.29■□□□□ 0.84
LSM11-201ENST00000286307 ZNF177Q13360 481 aaPredicted RBP20.29■□□□□ 0.84
LSM11-201ENST00000286307 TRPM4Q8TD43 1214 aa20.29■□□□□ 0.84
LSM11-201ENST00000286307 TMEM60Q9H2L4 133 aa20.29■□□□□ 0.84
LSM11-201ENST00000286307 CASS4Q9NQ75 786 aa20.29■□□□□ 0.84
LSM11-201ENST00000286307 RTN2O75298 545 aa20.29■□□□□ 0.84
LSM11-201ENST00000286307 SCFD1Q8WVM8 642 aa20.29■□□□□ 0.84
LSM11-201ENST00000286307 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.29■□□□□ 0.84
LSM11-201ENST00000286307 RNASEH1O60930 286 aaKnown RBP20.28■□□□□ 0.84
LSM11-201ENST00000286307 ART3Q13508 389 aa20.28■□□□□ 0.84
LSM11-201ENST00000286307 CAPRIN1Q14444 709 aaKnown RBP20.28■□□□□ 0.84
LSM11-201ENST00000286307 SYT17Q9BSW7 474 aa20.28■□□□□ 0.84
LSM11-201ENST00000286307 KRT37O76014 449 aa20.28■□□□□ 0.84
LSM11-201ENST00000286307 GTF2H1P32780 548 aa20.28■□□□□ 0.84
LSM11-201ENST00000286307 ALDH5A1P51649 535 aaPredicted RBP20.28■□□□□ 0.84
LSM11-201ENST00000286307 EPHB4P54760 987 aa20.28■□□□□ 0.84
LSM11-201ENST00000286307 ZBTB41Q5SVQ8 909 aa20.28■□□□□ 0.84
LSM11-201ENST00000286307 ATP6V0D2Q8N8Y2 350 aa20.28■□□□□ 0.84
LSM11-201ENST00000286307 PSEN2P49810 448 aa20.28■□□□□ 0.84
LSM11-201ENST00000286307 SLC30A10Q6XR72 485 aa20.28■□□□□ 0.84
LSM11-201ENST00000286307 MFN1Q8IWA4 741 aa20.28■□□□□ 0.84
LSM11-201ENST00000286307 SYTL5Q8TDW5 730 aaPredicted RBP20.28■□□□□ 0.84
LSM11-201ENST00000286307 MAML1Q92585 1016 aa20.28■□□□□ 0.84
LSM11-201ENST00000286307 KIF3CO14782 793 aa20.28■□□□□ 0.84
LSM11-201ENST00000286307 INSRRP14616 1297 aa20.28■□□□□ 0.84
LSM11-201ENST00000286307 BRD2P25440 801 aaKnown RBP20.28■□□□□ 0.84
LSM11-201ENST00000286307 IKBKEQ14164 716 aa20.28■□□□□ 0.84
LSM11-201ENST00000286307 RNF10Q8N5U6 811 aaKnown RBP20.28■□□□□ 0.84
LSM11-201ENST00000286307 LRRC4BQ9NT99 713 aa20.28■□□□□ 0.84
LSM11-201ENST00000286307 RASGRF2O14827 1237 aa20.27■□□□□ 0.84
LSM11-201ENST00000286307 ITIH6Q6UXX5 1313 aa20.27■□□□□ 0.84
LSM11-201ENST00000286307 CALR3Q96L12 384 aaKnown RBP20.27■□□□□ 0.84
LSM11-201ENST00000286307 IQGAP1P46940 1657 aa20.27■□□□□ 0.84
LSM11-201ENST00000286307 SFSWAPQ12872 951 aaKnown RBP20.27■□□□□ 0.84
LSM11-201ENST00000286307 TSGA10IPQ3SY00 556 aa20.27■□□□□ 0.84
LSM11-201ENST00000286307 CCNYL1Q8N7R7 359 aa20.27■□□□□ 0.84
LSM11-201ENST00000286307 PPM1NQ8N819 430 aa20.27■□□□□ 0.84
LSM11-201ENST00000286307 PPWD1Q96BP3 646 aaKnown RBP20.27■□□□□ 0.84
LSM11-201ENST00000286307 AGO4Q9HCK5 861 aaKnown RBP20.27■□□□□ 0.84
LSM11-201ENST00000286307 VTA1Q9NP79 307 aa20.27■□□□□ 0.84
LSM11-201ENST00000286307 SLC30A1Q9Y6M5 507 aa20.27■□□□□ 0.84
LSM11-201ENST00000286307 COPEO14579 308 aa20.27■□□□□ 0.84
LSM11-201ENST00000286307 GPAT2Q6NUI2 795 aa20.27■□□□□ 0.84
LSM11-201ENST00000286307 MPZL3Q6UWV2 235 aa20.27■□□□□ 0.84
LSM11-201ENST00000286307 PTF1AQ7RTS3 328 aa20.27■□□□□ 0.84
LSM11-201ENST00000286307 ADGRA1Q86SQ6 560 aa20.27■□□□□ 0.84
LSM11-201ENST00000286307 ADGRF2Q8IZF7 708 aa20.27■□□□□ 0.84
LSM11-201ENST00000286307 SUN2Q9UH99 717 aa20.27■□□□□ 0.84
LSM11-201ENST00000286307 PODXLO00592 558 aa20.27■□□□□ 0.84
LSM11-201ENST00000286307 ZNF513Q8N8E2 541 aaPredicted RBP20.27■□□□□ 0.84
LSM11-201ENST00000286307 TTC17Q96AE7 1141 aa20.27■□□□□ 0.84
LSM11-201ENST00000286307 C7orf25Q9BPX7 421 aa20.27■□□□□ 0.84
LSM11-201ENST00000286307 TRPM5Q9NZQ8 1165 aa20.27■□□□□ 0.84
LSM11-201ENST00000286307 SENP1Q9P0U3 644 aa20.27■□□□□ 0.84
LSM11-201ENST00000286307 ORC6Q9Y5N6 252 aa20.27■□□□□ 0.84
LSM11-201ENST00000286307 C3orf70A6NLC5 250 aaPredicted RBP20.27■□□□□ 0.83
LSM11-201ENST00000286307 ZNF197O14709 1029 aa20.27■□□□□ 0.83
LSM11-201ENST00000286307 CFLARO15519 480 aa20.27■□□□□ 0.83
LSM11-201ENST00000286307 ACO1P21399 889 aaKnown RBP20.27■□□□□ 0.83
LSM11-201ENST00000286307 GJC2Q5T442 439 aaPredicted RBP20.27■□□□□ 0.83
LSM11-201ENST00000286307 ZNF280DQ6N043 979 aa20.27■□□□□ 0.83
LSM11-201ENST00000286307 PPP1R13LQ8WUF5 828 aa20.27■□□□□ 0.83
LSM11-201ENST00000286307 GPR63Q9BZJ6 419 aa20.27■□□□□ 0.83
LSM11-201ENST00000286307 AIPL1Q9NZN9 384 aa20.27■□□□□ 0.83
LSM11-201ENST00000286307 USP32Q8NFA0 1604 aa20.26■□□□□ 0.83
LSM11-201ENST00000286307 C1orf54Q8WWF1 131 aa20.26■□□□□ 0.83
LSM11-201ENST00000286307 CAPS2Q9BXY5 557 aa20.26■□□□□ 0.83
LSM11-201ENST00000286307 NIF3L1Q9GZT8 377 aa20.26■□□□□ 0.83
LSM11-201ENST00000286307 WNT8AQ9H1J5 351 aa20.26■□□□□ 0.83
LSM11-201ENST00000286307 ALDH8A1Q9H2A2 487 aaPredicted RBP20.26■□□□□ 0.83
LSM11-201ENST00000286307 VIL1P09327 827 aaKnown RBP20.26■□□□□ 0.83
LSM11-201ENST00000286307 COPS2P61201 443 aa20.26■□□□□ 0.83
LSM11-201ENST00000286307 PGM5Q15124 567 aa20.26■□□□□ 0.83
LSM11-201ENST00000286307 NCLNQ969V3 563 aa20.26■□□□□ 0.83
LSM11-201ENST00000286307 TMEM8AQ9HCN3 771 aa20.26■□□□□ 0.83
LSM11-201ENST00000286307 IRF6O14896 467 aa20.26■□□□□ 0.83
LSM11-201ENST00000286307 CHRNA3P32297 505 aa20.26■□□□□ 0.83
LSM11-201ENST00000286307 CCL23P55773 120 aa20.26■□□□□ 0.83
LSM11-201ENST00000286307 DDI1Q8WTU0 396 aa20.26■□□□□ 0.83
LSM11-201ENST00000286307 POLR3CQ9BUI4 534 aaPredicted RBP20.26■□□□□ 0.83
LSM11-201ENST00000286307 PACSIN2Q9UNF0 486 aaPredicted RBP20.26■□□□□ 0.83
LSM11-201ENST00000286307 CYP11B2P19099 503 aa20.26■□□□□ 0.83
LSM11-201ENST00000286307 SESN2P58004 480 aaPredicted RBP20.26■□□□□ 0.83
LSM11-201ENST00000286307 TSNAXIP1Q2TAA8 658 aa20.26■□□□□ 0.83
LSM11-201ENST00000286307 DHX40Q8IX18 779 aaKnown RBP20.26■□□□□ 0.83
LSM11-201ENST00000286307 TEKT4Q8WW24 435 aa20.26■□□□□ 0.83
LSM11-201ENST00000286307 WDR35Q9P2L0 1181 aa20.26■□□□□ 0.83
LSM11-201ENST00000286307 KANSL3Q9P2N6 904 aa20.26■□□□□ 0.83
LSM11-201ENST00000286307 SLC26A4O43511 780 aa20.26■□□□□ 0.83
LSM11-201ENST00000286307 KRT14P02533 472 aa20.26■□□□□ 0.83
LSM11-201ENST00000286307 NAMPTP43490 491 aa20.26■□□□□ 0.83
LSM11-201ENST00000286307 RPL10AP62906 217 aaKnown RBP20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms