RNA–Protein interactions for RNA: ENST00000261058.2

CCDC54-201, Transcript of coiled-coil domain containing 54, humanhuman

APPRIS P1 BASIC

Gene CCDC54, Length 1,444 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC54-201ENST00000261058 MB21D1Q8N884 522 aa5.59□□□□□ -1.51
CCDC54-201ENST00000261058 OR10H5Q8NGA6 315 aa5.59□□□□□ -1.51
CCDC54-201ENST00000261058 ATXN2LQ8WWM7 1075 aaKnown RBP5.59□□□□□ -1.51
CCDC54-201ENST00000261058 APIPQ96GX9 242 aa5.59□□□□□ -1.51
CCDC54-201ENST00000261058 BDH2Q9BUT1 245 aa5.59□□□□□ -1.51
CCDC54-201ENST00000261058 PACSIN1Q9BY11 444 aa5.59□□□□□ -1.51
CCDC54-201ENST00000261058 BTBD1Q9H0C5 482 aa5.59□□□□□ -1.51
CCDC54-201ENST00000261058 GPR35Q9HC97 309 aa5.59□□□□□ -1.51
CCDC54-201ENST00000261058 STAP2Q9UGK3 403 aa5.59□□□□□ -1.51
CCDC54-201ENST00000261058 MED16Q9Y2X0 877 aa5.59□□□□□ -1.51
CCDC54-201ENST00000261058 PCDHA1Q9Y5I3 950 aa5.59□□□□□ -1.51
CCDC54-201ENST00000261058 KRTAP9-7A8MTY7 169 aa5.58□□□□□ -1.52
CCDC54-201ENST00000261058 ISM1B1AKI9 464 aa5.58□□□□□ -1.52
CCDC54-201ENST00000261058 PMM2O15305 246 aa5.58□□□□□ -1.52
CCDC54-201ENST00000261058 CYP27B1O15528 508 aa5.58□□□□□ -1.52
CCDC54-201ENST00000261058 AHSGP02765 367 aa5.58□□□□□ -1.52
CCDC54-201ENST00000261058 MYF5P13349 255 aa5.58□□□□□ -1.52
CCDC54-201ENST00000261058 HK1P19367 917 aa5.58□□□□□ -1.52
CCDC54-201ENST00000261058 EN2P19622 333 aaPredicted RBP5.58□□□□□ -1.52
CCDC54-201ENST00000261058 GCSHP23434 173 aa5.58□□□□□ -1.52
CCDC54-201ENST00000261058 SLC6A2P23975 617 aa5.58□□□□□ -1.52
CCDC54-201ENST00000261058 TM4SF4P48230 202 aa5.58□□□□□ -1.52
CCDC54-201ENST00000261058 RAP2BP61225 183 aa5.58□□□□□ -1.52
CCDC54-201ENST00000261058 KBTBD7Q8WVZ9 684 aa5.58□□□□□ -1.52
CCDC54-201ENST00000261058 NEU1Q99519 415 aa5.58□□□□□ -1.52
CCDC54-201ENST00000261058 MNTQ99583 582 aa5.58□□□□□ -1.52
CCDC54-201ENST00000261058 KRTAP3-1Q9BYR8 98 aa5.58□□□□□ -1.52
CCDC54-201ENST00000261058 TRIM54Q9BYV2 358 aa5.58□□□□□ -1.52
CCDC54-201ENST00000261058 GSTO2Q9H4Y5 243 aa5.58□□□□□ -1.52
CCDC54-201ENST00000261058 SARS2Q9NP81 518 aaKnown RBP5.58□□□□□ -1.52
CCDC54-201ENST00000261058 CFAP97Q9P2B7 532 aa5.58□□□□□ -1.52
CCDC54-201ENST00000261058 XDHP47989 1333 aa5.58□□□□□ -1.52
CCDC54-201ENST00000261058 A0A1W2PPL8 197 aa5.57□□□□□ -1.52
CCDC54-201ENST00000261058 CFAP69A5D8W1 941 aa5.57□□□□□ -1.52
CCDC54-201ENST00000261058 CDHR4A6H8M9 788 aa5.57□□□□□ -1.52
CCDC54-201ENST00000261058 PLIN1O60240 522 aa5.57□□□□□ -1.52
CCDC54-201ENST00000261058 PRSS23O95084 383 aa5.57□□□□□ -1.52
CCDC54-201ENST00000261058 GNAI3P08754 354 aa5.57□□□□□ -1.52
CCDC54-201ENST00000261058 RARBP10826 455 aa5.57□□□□□ -1.52
CCDC54-201ENST00000261058 RPL17P18621 184 aaKnown RBP5.57□□□□□ -1.52
CCDC54-201ENST00000261058 MAN2A2P49641 1150 aa5.57□□□□□ -1.52
CCDC54-201ENST00000261058 SELENOPP49908 381 aa5.57□□□□□ -1.52
CCDC54-201ENST00000261058 SCNN1GP51170 649 aa5.57□□□□□ -1.52
CCDC54-201ENST00000261058 GNAI1P63096 354 aa5.57□□□□□ -1.52
CCDC54-201ENST00000261058 SLFN5Q08AF3 891 aa5.57□□□□□ -1.52
CCDC54-201ENST00000261058 KHDC1LQ5JSQ8 128 aa5.57□□□□□ -1.52
CCDC54-201ENST00000261058 AGAP9Q5VTM2 703 aa5.57□□□□□ -1.52
CCDC54-201ENST00000261058 SGMS1Q86VZ5 419 aa5.57□□□□□ -1.52
CCDC54-201ENST00000261058 RHOT2Q8IXI1 618 aa5.57□□□□□ -1.52
CCDC54-201ENST00000261058 NAA15Q9BXJ9 866 aaKnown RBP5.57□□□□□ -1.52
CCDC54-201ENST00000261058 BRD9Q9H8M2 597 aa5.57□□□□□ -1.52
CCDC54-201ENST00000261058 RSAD1Q9HA92 442 aa5.57□□□□□ -1.52
CCDC54-201ENST00000261058 SPON1Q9HCB6 807 aa5.57□□□□□ -1.52
CCDC54-201ENST00000261058 PIH1D1Q9NWS0 290 aaKnown RBP5.57□□□□□ -1.52
CCDC54-201ENST00000261058 USP25Q9UHP3 1055 aa5.57□□□□□ -1.52
CCDC54-201ENST00000261058 TPCN1Q9ULQ1 816 aa5.57□□□□□ -1.52
CCDC54-201ENST00000261058 SLC45A2Q9UMX9 530 aa5.57□□□□□ -1.52
CCDC54-201ENST00000261058 PCDHA6Q9UN73 950 aa5.57□□□□□ -1.52
CCDC54-201ENST00000261058 CHST2Q9Y4C5 530 aa5.57□□□□□ -1.52
CCDC54-201ENST00000261058 PCDHGB6Q9Y5F9 930 aa5.57□□□□□ -1.52
CCDC54-201ENST00000261058 GOLGA6L6A8MZA4 724 aa5.57□□□□□ -1.52
CCDC54-201ENST00000261058 LEFTY2O00292 366 aa5.57□□□□□ -1.52
CCDC54-201ENST00000261058 TBX3O15119 743 aa5.57□□□□□ -1.52
CCDC54-201ENST00000261058 GJB1P08034 283 aa5.57□□□□□ -1.52
CCDC54-201ENST00000261058 HDCP19113 662 aa5.57□□□□□ -1.52
CCDC54-201ENST00000261058 CHN2P52757 468 aa5.57□□□□□ -1.52
CCDC54-201ENST00000261058 SOX8P57073 446 aa5.57□□□□□ -1.52
CCDC54-201ENST00000261058 EXOSC9Q06265 439 aaKnown RBP5.57□□□□□ -1.52
CCDC54-201ENST00000261058 HS1BP3Q53T59 392 aa5.57□□□□□ -1.52
CCDC54-201ENST00000261058 GSPT2Q8IYD1 628 aaKnown RBP5.57□□□□□ -1.52
CCDC54-201ENST00000261058 FITM2Q8N6M3 262 aa5.57□□□□□ -1.52
CCDC54-201ENST00000261058 NUP133Q8WUM0 1156 aa5.57□□□□□ -1.52
CCDC54-201ENST00000261058 TNPO1Q92973 898 aaKnown RBP5.57□□□□□ -1.52
CCDC54-201ENST00000261058 SCAMP4Q969E2 229 aa5.57□□□□□ -1.52
CCDC54-201ENST00000261058 MSLNLQ96KJ4 702 aa5.57□□□□□ -1.52
CCDC54-201ENST00000261058 KLHL32Q96NJ5 620 aa5.57□□□□□ -1.52
CCDC54-201ENST00000261058 GPR87Q9BY21 358 aa5.57□□□□□ -1.52
CCDC54-201ENST00000261058 LRRC27Q9C0I9 530 aa5.57□□□□□ -1.52
CCDC54-201ENST00000261058 NUP62CLQ9H1M0 184 aa5.57□□□□□ -1.52
CCDC54-201ENST00000261058 CAMSAP3Q9P1Y5 1249 aaPredicted RBP5.57□□□□□ -1.52
CCDC54-201ENST00000261058 RGS17Q9UGC6 210 aaPredicted RBP5.57□□□□□ -1.52
CCDC54-201ENST00000261058 FAM50BQ9Y247 325 aa5.57□□□□□ -1.52
CCDC54-201ENST00000261058 TESMINQ9Y4I5 508 aa5.57□□□□□ -1.52
CCDC54-201ENST00000261058 USP19O94966 1318 aa5.56□□□□□ -1.52
CCDC54-201ENST00000261058 DIRC3C9JPN6 131 aa5.56□□□□□ -1.52
CCDC54-201ENST00000261058 K7ESM1 405 aa5.56□□□□□ -1.52
CCDC54-201ENST00000261058 MGEA5O60502 916 aa5.56□□□□□ -1.52
CCDC54-201ENST00000261058 ACRV1P26436 265 aa5.56□□□□□ -1.52
CCDC54-201ENST00000261058 HIBADHP31937 336 aaKnown RBP5.56□□□□□ -1.52
CCDC54-201ENST00000261058 RRP1BQ14684 758 aaKnown RBP5.56□□□□□ -1.52
CCDC54-201ENST00000261058 UTP14CQ5TAP6 766 aaKnown RBP5.56□□□□□ -1.52
CCDC54-201ENST00000261058 IL31Q6EBC2 164 aa5.56□□□□□ -1.52
CCDC54-201ENST00000261058 MED25Q71SY5 747 aa5.56□□□□□ -1.52
CCDC54-201ENST00000261058 PPP1R32Q7Z5V6 425 aa5.56□□□□□ -1.52
CCDC54-201ENST00000261058 TMIEQ8NEW7 156 aa5.56□□□□□ -1.52
CCDC54-201ENST00000261058 PHKBQ93100 1093 aa5.56□□□□□ -1.52
CCDC54-201ENST00000261058 C1QTNF3Q9BXJ4 246 aa5.56□□□□□ -1.52
CCDC54-201ENST00000261058 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.56□□□□□ -1.52
CCDC54-201ENST00000261058 KLHL11Q9NVR0 708 aa5.56□□□□□ -1.52
CCDC54-201ENST00000261058 POGKQ9P215 609 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms