RNA–Protein interactions for RNA: snR53

snR53, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR53, Length 91 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR53snR53 YPR174CQ06616 221 aaPredicted RBP-3.21□□□□□ -2.92
snR53snR53 TAR1Q8TGM6 124 aa-3.21□□□□□ -2.92
snR53snR53 MSF1P08425 469 aa-3.22□□□□□ -2.92
snR53snR53 RPL18AP0CX49 186 aaKnown RBP-3.22□□□□□ -2.92
snR53snR53 RPL18BP0CX50 186 aaKnown RBP-3.22□□□□□ -2.92
snR53snR53 RDS1P25611 832 aa-3.22□□□□□ -2.92
snR53snR53 ERG28P40030 148 aa-3.22□□□□□ -2.92
snR53snR53 NBP35P52920 328 aa-3.22□□□□□ -2.92
snR53snR53 PET191Q02772 108 aa-3.22□□□□□ -2.92
snR53snR53 MGR2Q02889 113 aa-3.22□□□□□ -2.92
snR53snR53 SXM1Q04175 944 aaKnown RBP-3.22□□□□□ -2.92
snR53snR53 FSF1Q12029 327 aaKnown RBP-3.22□□□□□ -2.92
snR53snR53 POM33Q12164 279 aa-3.22□□□□□ -2.92
snR53snR53 ERP4Q12450 207 aa-3.22□□□□□ -2.92
snR53snR53 ADE1P27616 306 aa-3.23□□□□□ -2.93
snR53snR53 YDR124WQ04608 324 aa-3.23□□□□□ -2.93
snR53snR53 DBP9Q06218 594 aaKnown RBP-3.23□□□□□ -2.93
snR53snR53 FCY2P17064 533 aa-3.24□□□□□ -2.93
snR53snR53 SNC2P33328 115 aa-3.24□□□□□ -2.93
snR53snR53 YML6P51998 286 aa-3.24□□□□□ -2.93
snR53snR53 YPL077CQ02831 240 aa-3.24□□□□□ -2.93
snR53snR53 JLP1Q12358 412 aa-3.24□□□□□ -2.93
snR53snR53 LAA1P39526 2014 aa-3.25□□□□□ -2.93
snR53snR53 YLR156WP0CE96 114 aa-3.25□□□□□ -2.93
snR53snR53 YLR159WP0CE97 114 aa-3.25□□□□□ -2.93
snR53snR53 YLR161WP0CE98 114 aa-3.25□□□□□ -2.93
snR53snR53 MNN9P39107 395 aaKnown RBP-3.25□□□□□ -2.93
snR53snR53 RPA43P46669 326 aa-3.25□□□□□ -2.93
snR53snR53 SWS2P53937 143 aa-3.25□□□□□ -2.93
snR53snR53 YPR172WQ06608 200 aa-3.25□□□□□ -2.93
snR53snR53 RPF1P38805 295 aaKnown RBP-3.26□□□□□ -2.93
snR53snR53 RPL6BP05739 176 aaKnown RBP-3.27□□□□□ -2.93
snR53snR53 MAK5P38112 773 aaPredicted RBP-3.27□□□□□ -2.93
snR53snR53 YER034WP40022 185 aaKnown RBP-3.27□□□□□ -2.93
snR53snR53 RPL6AQ02326 176 aaKnown RBP-3.27□□□□□ -2.93
snR53snR53 GOT1Q03554 138 aa-3.27□□□□□ -2.93
snR53snR53 NAT3Q06504 195 aa-3.27□□□□□ -2.93
snR53snR53 PSF1Q12488 208 aa-3.27□□□□□ -2.93
snR53snR53 TFB5Q3E7C1 72 aaPredicted RBP-3.27□□□□□ -2.93
snR53snR53 HTL1Q9URQ5 78 aa-3.27□□□□□ -2.93
snR53snR53 SHE2P36068 246 aaKnown RBP RIP-Chip data-3.28□□□□□ -2.93not detected
snR53snR53 YKR070WP36151 352 aaKnown RBP-3.28□□□□□ -2.93
snR53snR53 ADH5P38113 351 aaKnown RBP-3.28□□□□□ -2.93
snR53snR53 RPA34P47006 233 aaPredicted RBP-3.28□□□□□ -2.93
snR53snR53 YJL055WP47044 245 aa-3.28□□□□□ -2.93
snR53snR53 SFH1Q06168 426 aa-3.28□□□□□ -2.93
snR53snR53 POL2P21951 2222 aaKnown RBP-3.29□□□□□ -2.94
snR53snR53 RPS22AP0C0W1 130 aaKnown RBP-3.29□□□□□ -2.94
snR53snR53 RPS22BQ3E7Y3 130 aaKnown RBP-3.29□□□□□ -2.94
snR53snR53 YOR020W-AQ3E824 90 aa-3.29□□□□□ -2.94
snR53snR53 IPP1P00817 287 aaKnown RBP-3.3□□□□□ -2.94
snR53snR53 YBR063CP38083 404 aa-3.3□□□□□ -2.94
snR53snR53 YHL018WP38744 120 aaPredicted RBP-3.3□□□□□ -2.94
snR53snR53 TVP23P38962 199 aa-3.3□□□□□ -2.94
snR53snR53 GTO1P48239 356 aa-3.3□□□□□ -2.94
snR53snR53 YMR111CQ04461 462 aaPredicted RBP-3.3□□□□□ -2.94
snR53snR53 MRPL40P36534 297 aa-3.31□□□□□ -2.94
snR53snR53 RSM25P40496 264 aa-3.31□□□□□ -2.94
snR53snR53 LOH1P47055 219 aa-3.31□□□□□ -2.94
snR53snR53 YOR072WQ08486 104 aa-3.31□□□□□ -2.94
snR53snR53 GPM2Q12008 311 aa-3.31□□□□□ -2.94
snR53snR53 DUR1,2P32528 1835 aaKnown RBP-3.32□□□□□ -2.94
snR53snR53 MRH4P53166 561 aa-3.32□□□□□ -2.94
snR53snR53 SYC1Q08553 188 aaPredicted RBP-3.32□□□□□ -2.94
snR53snR53 COX8P04039 78 aa-3.33□□□□□ -2.94
snR53snR53 RPP0P05317 312 aaKnown RBP-3.33□□□□□ -2.94
snR53snR53 ASF2P32448 525 aaPredicted RBP-3.33□□□□□ -2.94
snR53snR53 TDA11P38854 504 aa-3.33□□□□□ -2.94
snR53snR53 JEM1P40358 645 aa-3.33□□□□□ -2.94
snR53snR53 GCD14P46959 383 aaPredicted RBP-3.33□□□□□ -2.94
snR53snR53 YNL122CP53921 115 aaPredicted RBP-3.33□□□□□ -2.94
snR53snR53 YDR248CQ03786 193 aa-3.33□□□□□ -2.94
snR53snR53 FRS2P15625 503 aaKnown RBP-3.34□□□□□ -2.94
snR53snR53 PET18P25362 215 aa-3.34□□□□□ -2.94
snR53snR53 ECM4P36156 370 aa-3.34□□□□□ -2.94
snR53snR53 MRPL17P36528 281 aa-3.34□□□□□ -2.94
snR53snR53 YHR140WP38842 239 aa-3.34□□□□□ -2.94
snR53snR53 COX16P47081 118 aa-3.34□□□□□ -2.94
snR53snR53 CPD1P53314 239 aa-3.34□□□□□ -2.94
snR53snR53 REP2P03872 296 aa-3.35□□□□□ -2.95
snR53snR53 KIN28P06242 306 aa-3.35□□□□□ -2.95
snR53snR53 GDT1P38301 280 aaPredicted RBP-3.35□□□□□ -2.95
snR53snR53 DAD4P69851 72 aa-3.35□□□□□ -2.95
snR53snR53 ARV1Q06541 321 aa-3.35□□□□□ -2.95
snR53snR53 GVP36P40531 326 aaKnown RBP-3.36□□□□□ -2.95
snR53snR53 STH1P32597 1359 aa-3.37□□□□□ -2.95
snR53snR53 PPA2P28239 310 aa-3.37□□□□□ -2.95
snR53snR53 RIB1P38066 345 aa-3.37□□□□□ -2.95
snR53snR53 YMR321CQ04898 105 aa-3.37□□□□□ -2.95
snR53snR53 SSQ1Q05931 657 aaPredicted RBP-3.37□□□□□ -2.95
snR53snR53 YPR170W-BP0C5R9 85 aa-3.38□□□□□ -2.95
snR53snR53 YBR285WP38354 144 aa-3.38□□□□□ -2.95
snR53snR53 GPN3Q06543 272 aa-3.38□□□□□ -2.95
snR53snR53 FCY1Q12178 158 aa-3.38□□□□□ -2.95
snR53snR53 SIA1Q12212 622 aa-3.38□□□□□ -2.95
snR53snR53 MGM101P32787 269 aaKnown RBP-3.39□□□□□ -2.95
snR53snR53 PAM17P36147 197 aa-3.39□□□□□ -2.95
snR53snR53 CIN5P40917 295 aa-3.39□□□□□ -2.95
snR53snR53 ALB1P47019 175 aaPredicted RBP-3.39□□□□□ -2.95
snR53snR53 CDC14Q00684 551 aa-3.39□□□□□ -2.95
Retrieved 100 of 5,963 RNA–protein pairs in 98.8 ms