RNA–Protein interactions for RNA: YPR025C

CCL1, Transcript of Cyclin associated with protein kinase Kin28p, yeastyeast

Gene CCL1, Length 1,182 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CCL1YPR025C CTR2P38865 189 aa2.13□□□□□ -2.07
CCL1YPR025C HAM1P47119 197 aaKnown RBP2.13□□□□□ -2.07
CCL1YPR025C RAD17P48581 401 aa2.13□□□□□ -2.07
CCL1YPR025C ATG38Q05789 226 aaKnown RBP2.13□□□□□ -2.07
CCL1YPR025C GET4Q12125 312 aa2.13□□□□□ -2.07
CCL1YPR025C ATO3Q12359 275 aa2.13□□□□□ -2.07
CCL1YPR025C YDR157WA0A023PZE8 133 aa2.12□□□□□ -2.07
CCL1YPR025C YBR121C-AP0C5L4 52 aa2.12□□□□□ -2.07
CCL1YPR025C YPK2P18961 677 aa2.12□□□□□ -2.07
CCL1YPR025C CUE1P38428 203 aa2.12□□□□□ -2.07
CCL1YPR025C CAT5P41735 233 aa2.12□□□□□ -2.07
CCL1YPR025C TRM9P49957 279 aa2.12□□□□□ -2.07
CCL1YPR025C CUS2P53830 285 aaPredicted RBP2.12□□□□□ -2.07
CCL1YPR025C CDC123Q05791 360 aa2.12□□□□□ -2.07
CCL1YPR025C ATG39Q06159 398 aa2.12□□□□□ -2.07
CCL1YPR025C NCB2Q92317 146 aa2.12□□□□□ -2.07
CCL1YPR025C YPL229WQ99395 206 aa2.12□□□□□ -2.07
CCL1YPR025C BCY1P07278 416 aaKnown RBP2.11□□□□□ -2.07
CCL1YPR025C APA2P22108 325 aa2.11□□□□□ -2.07
CCL1YPR025C ASF2P32448 525 aaPredicted RBP2.11□□□□□ -2.07
CCL1YPR025C PRX1P34227 261 aaKnown RBP2.11□□□□□ -2.07
CCL1YPR025C YPT52P36018 234 aaKnown RBP2.11□□□□□ -2.07
CCL1YPR025C RFC4P40339 323 aaKnown RBP2.11□□□□□ -2.07
CCL1YPR025C ADO1P47143 340 aaKnown RBP2.11□□□□□ -2.07
CCL1YPR025C ILM1P47155 203 aa2.11□□□□□ -2.07
CCL1YPR025C YJR149WP47177 404 aa2.11□□□□□ -2.07
CCL1YPR025C MIC26P50087 233 aa2.11□□□□□ -2.07
CCL1YPR025C MGA1P53050 456 aa2.11□□□□□ -2.07
CCL1YPR025C ALG13P53178 202 aa2.11□□□□□ -2.07
CCL1YPR025C GIM3P53900 129 aa2.11□□□□□ -2.07
CCL1YPR025C NIP7Q08962 181 aaKnown RBP2.11□□□□□ -2.07
CCL1YPR025C BEM2P39960 2167 aaKnown RBP2.1□□□□□ -2.07
CCL1YPR025C MATALPHA2P0CY08 210 aa2.1□□□□□ -2.07
CCL1YPR025C HMLALPHA2P0CY09 210 aa2.1□□□□□ -2.07
CCL1YPR025C SNA3P14359 133 aa2.1□□□□□ -2.07
CCL1YPR025C FCY2P17064 533 aa2.1□□□□□ -2.07
CCL1YPR025C CBF1P17106 351 aa2.1□□□□□ -2.07
CCL1YPR025C TOS8P53147 276 aa2.1□□□□□ -2.07
CCL1YPR025C YRA1Q12159 226 aaKnown RBP2.1□□□□□ -2.07
CCL1YPR025C DCN1Q12395 269 aa2.1□□□□□ -2.07
CCL1YPR025C YOR020W-AQ3E824 90 aa2.1□□□□□ -2.07
CCL1YPR025C HTB1P02293 131 aaKnown RBP2.09□□□□□ -2.07
CCL1YPR025C HTB2P02294 131 aa2.09□□□□□ -2.07
CCL1YPR025C MER1P16523 270 aa2.09□□□□□ -2.07
CCL1YPR025C RPF1P38805 295 aaKnown RBP2.09□□□□□ -2.07
CCL1YPR025C YAR068WP39564 161 aa2.09□□□□□ -2.07
CCL1YPR025C NSA1P53136 463 aaPredicted RBP2.09□□□□□ -2.07
CCL1YPR025C JLP1Q12358 412 aa2.09□□□□□ -2.07
CCL1YPR025C YCL012CQ8J0M4 134 aa2.09□□□□□ -2.07
CCL1YPR025C YHR139C-AO13536 103 aa2.08□□□□□ -2.08
CCL1YPR025C RPL28P02406 149 aaKnown RBP2.08□□□□□ -2.08
CCL1YPR025C RPL9AP05738 191 aaKnown RBP2.08□□□□□ -2.08
CCL1YPR025C SPT3P06844 337 aa2.08□□□□□ -2.08
CCL1YPR025C RFA3P26755 122 aaKnown RBP2.08□□□□□ -2.08
CCL1YPR025C IDH1P28834 360 aaKnown RBP RIP-Chip data2.08□□□□□ -2.08not detected
CCL1YPR025C PRE6P40303 254 aaKnown RBP2.08□□□□□ -2.08
CCL1YPR025C RPA43P46669 326 aa2.08□□□□□ -2.08
CCL1YPR025C MCM22P47167 239 aa2.08□□□□□ -2.08
CCL1YPR025C RPL9BP51401 191 aaKnown RBP2.08□□□□□ -2.08
CCL1YPR025C NOP19P53317 196 aaPredicted RBP2.08□□□□□ -2.08
CCL1YPR025C SNZ1Q03148 297 aa2.08□□□□□ -2.08
CCL1YPR025C MRPS8Q03799 155 aa2.08□□□□□ -2.08
CCL1YPR025C YML096WQ04489 525 aa2.08□□□□□ -2.08
CCL1YPR025C YMR226CQ05016 267 aaKnown RBP2.08□□□□□ -2.08
CCL1YPR025C ABP140Q08641 628 aaKnown RBP2.08□□□□□ -2.08
CCL1YPR025C RAD9P14737 1309 aa2.08□□□□□ -2.08
CCL1YPR025C TUS1Q06412 1307 aa2.08□□□□□ -2.08
CCL1YPR025C ADE1P27616 306 aa2.07□□□□□ -2.08
CCL1YPR025C SSO1P32867 290 aa2.07□□□□□ -2.08
CCL1YPR025C SRY1P36007 326 aa2.07□□□□□ -2.08
CCL1YPR025C YBR063CP38083 404 aa2.07□□□□□ -2.08
CCL1YPR025C YIL001WP40560 513 aa2.07□□□□□ -2.08
CCL1YPR025C CIS3P47001 227 aa2.07□□□□□ -2.08
CCL1YPR025C BAT2P47176 376 aaKnown RBP2.07□□□□□ -2.08
CCL1YPR025C NUP57P48837 541 aa2.07□□□□□ -2.08
CCL1YPR025C YGR219WP53307 113 aa2.07□□□□□ -2.08
CCL1YPR025C HEM25Q07534 307 aa2.07□□□□□ -2.08
CCL1YPR025C TPO4Q12256 659 aa2.07□□□□□ -2.08
CCL1YPR025C RAS2P01120 322 aaKnown RBP2.06□□□□□ -2.08
CCL1YPR025C FBA1P14540 359 aaKnown RBP2.06□□□□□ -2.08
CCL1YPR025C URA6P15700 204 aa2.06□□□□□ -2.08
CCL1YPR025C SCL1P21243 252 aaKnown RBP2.06□□□□□ -2.08
CCL1YPR025C DBF2P22204 572 aa2.06□□□□□ -2.08
CCL1YPR025C MDH3P32419 343 aaKnown RBP RIP-Chip data2.06□□□□□ -2.08not detected
CCL1YPR025C ECM33P38248 429 aaKnown RBP2.06□□□□□ -2.08
CCL1YPR025C DOG1P38774 246 aa2.06□□□□□ -2.08
CCL1YPR025C IKI1P38874 309 aa2.06□□□□□ -2.08
CCL1YPR025C PEX17P40155 199 aa2.06□□□□□ -2.08
CCL1YPR025C YRB2P40517 327 aa2.06□□□□□ -2.08
CCL1YPR025C YJR056CP47115 236 aa2.06□□□□□ -2.08
CCL1YPR025C DAD3P69850 94 aa2.06□□□□□ -2.08
CCL1YPR025C YIL177CP40434 1758 aa2.05□□□□□ -2.08
CCL1YPR025C YJL225CP40889 1758 aa2.05□□□□□ -2.08
CCL1YPR025C QCR7P00128 127 aa2.05□□□□□ -2.08
CCL1YPR025C MSW1P04803 379 aa2.05□□□□□ -2.08
CCL1YPR025C PEX4P29340 183 aa2.05□□□□□ -2.08
CCL1YPR025C SPS18P32572 300 aa2.05□□□□□ -2.08
CCL1YPR025C BRR6P53062 197 aa2.05□□□□□ -2.08
CCL1YPR025C GET1P53192 235 aa2.05□□□□□ -2.08
CCL1YPR025C ERV29P53337 310 aa2.05□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 14.6 ms