RNA–Protein interactions for RNA: YPL174C

NIP100, Transcript of Large subunit of the dynactin complex, yeast

Gene NIP100, Length 2,607 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NIP100	YPL174C	EBP2	P36049	427 aa	Known RBP	0.47	□□□□□ -2.33
NIP100	YPL174C	YML096W	Q04489	525 aa		0.47	□□□□□ -2.33
NIP100	YPL174C	YLR162W	Q06235	118 aa		0.47	□□□□□ -2.33
NIP100	YPL174C	RIB1	P38066	345 aa		0.46	□□□□□ -2.34
NIP100	YPL174C	GOS1	P38736	223 aa		0.46	□□□□□ -2.34
NIP100	YPL174C	YNL217W	P40152	326 aa		0.46	□□□□□ -2.34
NIP100	YPL174C	RPL37A	P49166	88 aa	Known RBP	0.46	□□□□□ -2.34
NIP100	YPL174C	COQ10	Q08058	207 aa		0.46	□□□□□ -2.34
NIP100	YPL174C	MYO2	P19524	1574 aa	Known RBP	0.46	□□□□□ -2.34
NIP100	YPL174C	YIL177C	P40434	1758 aa		0.46	□□□□□ -2.34
NIP100	YPL174C	YJL225C	P40889	1758 aa		0.46	□□□□□ -2.34
NIP100	YPL174C	YBR063C	P38083	404 aa		0.46	□□□□□ -2.34
NIP100	YPL174C	BIG1	P38813	335 aa		0.46	□□□□□ -2.34
NIP100	YPL174C	SVP26	P38869	228 aa		0.46	□□□□□ -2.34
NIP100	YPL174C	SMB1	P40018	196 aa	Known RBP	0.46	□□□□□ -2.34
NIP100	YPL174C	RTT105	P40063	208 aa		0.46	□□□□□ -2.34
NIP100	YPL174C	TUS1	Q06412	1307 aa		0.45	□□□□□ -2.34
NIP100	YPL174C	CAT8	P39113	1433 aa		0.45	□□□□□ -2.34
NIP100	YPL174C	DBP3	P20447	523 aa	Known RBP	0.45	□□□□□ -2.34
NIP100	YPL174C	SNZ1	Q03148	297 aa		0.45	□□□□□ -2.34
NIP100	YPL174C	NIP7	Q08962	181 aa	Known RBP	0.45	□□□□□ -2.34
NIP100	YPL174C	TPO4	Q12256	659 aa		0.45	□□□□□ -2.34
NIP100	YPL174C	YLR126C	Q12288	251 aa		0.45	□□□□□ -2.34
NIP100	YPL174C	ATG22	P25568	528 aa		0.45	□□□□□ -2.34
NIP100	YPL174C	HOM6	P31116	359 aa	Known RBP	0.45	□□□□□ -2.34
NIP100	YPL174C	TVP38	P36164	337 aa		0.45	□□□□□ -2.34
NIP100	YPL174C	TIR3	P40552	269 aa		0.45	□□□□□ -2.34
NIP100	YPL174C	AIF1	P52923	378 aa		0.45	□□□□□ -2.34
NIP100	YPL174C	RRF1	P38771	230 aa		0.44	□□□□□ -2.34
NIP100	YPL174C	NSA1	P53136	463 aa	Predicted RBP	0.44	□□□□□ -2.34
NIP100	YPL174C	ARR2	Q06597	130 aa		0.44	□□□□□ -2.34
NIP100	YPL174C	LTE1	P07866	1435 aa		0.44	□□□□□ -2.34
NIP100	YPL174C	TCD1	P38756	429 aa		0.44	□□□□□ -2.34
NIP100	YPL174C	RPL37B	P51402	88 aa	Known RBP	0.44	□□□□□ -2.34
NIP100	YPL174C	YMR007W	Q03675	126 aa		0.44	□□□□□ -2.34
NIP100	YPL174C	YML108W	Q03759	105 aa		0.44	□□□□□ -2.34
NIP100	YPL174C	MSB2	P32334	1306 aa		0.43	□□□□□ -2.34
NIP100	YPL174C	COX2	P00410	251 aa		0.43	□□□□□ -2.34
NIP100	YPL174C	GRX2	P17695	143 aa	Known RBP	0.43	□□□□□ -2.34
NIP100	YPL174C	SKG1	P36169	355 aa		0.43	□□□□□ -2.34
NIP100	YPL174C	RPF1	P38805	295 aa	Known RBP	0.43	□□□□□ -2.34
NIP100	YPL174C	CTR2	P38865	189 aa		0.43	□□□□□ -2.34
NIP100	YPL174C	THO1	P40040	218 aa	Known RBP	0.43	□□□□□ -2.34
NIP100	YPL174C	ICE2	P40499	491 aa		0.43	□□□□□ -2.34
NIP100	YPL174C	ERJ5	P43613	295 aa	Predicted RBP	0.43	□□□□□ -2.34
NIP100	YPL174C	BNA6	P43619	295 aa		0.43	□□□□□ -2.34
NIP100	YPL174C	ERV25	P54837	211 aa	Known RBP	0.43	□□□□□ -2.34
NIP100	YPL174C	CYR1	P08678	2026 aa	Known RBP	0.43	□□□□□ -2.34
NIP100	YPL174C	OM45	P16547	393 aa		0.43	□□□□□ -2.34
NIP100	YPL174C	YET1	P35723	206 aa		0.43	□□□□□ -2.34
NIP100	YPL174C	YNL046W	P53956	172 aa		0.43	□□□□□ -2.34
NIP100	YPL174C	TMA19	P35691	167 aa	Known RBP	0.42	□□□□□ -2.34
NIP100	YPL174C	ECM33	P38248	429 aa	Known RBP	0.42	□□□□□ -2.34
NIP100	YPL174C	ABF2	Q02486	183 aa		0.42	□□□□□ -2.34
NIP100	YPL174C	HAP1	P0CE41	1502 aa		0.42	□□□□□ -2.34
NIP100	YPL174C	PRP8	P33334	2413 aa	Known RBP	0.42	□□□□□ -2.34
NIP100	YPL174C	YRF1-3	P0CX14	1859 aa		0.42	□□□□□ -2.34
NIP100	YPL174C	YRF1-7	P0CX15	1859 aa		0.42	□□□□□ -2.34
NIP100	YPL174C	YRF1-6	P53819	1859 aa		0.42	□□□□□ -2.34
NIP100	YPL174C	VAR1	P02381	398 aa		0.42	□□□□□ -2.34
NIP100	YPL174C	CUE1	P38428	203 aa		0.42	□□□□□ -2.34
NIP100	YPL174C	PET100	P38958	111 aa		0.42	□□□□□ -2.34
NIP100	YPL174C	EAF6	P47128	113 aa		0.42	□□□□□ -2.34
NIP100	YPL174C	YDR248C	Q03786	193 aa		0.42	□□□□□ -2.34
NIP100	YPL174C	YOR029W	Q12243	111 aa		0.42	□□□□□ -2.34
NIP100	YPL174C	BUD4	P47136	1447 aa		0.42	□□□□□ -2.34
NIP100	YPL174C	YBR096W	P38256	230 aa		0.41	□□□□□ -2.34
NIP100	YPL174C	SSK2	P53599	1579 aa		0.41	□□□□□ -2.34
NIP100	YPL174C	GAS3	Q03655	524 aa		0.41	□□□□□ -2.34
NIP100	YPL174C	SEI1	Q06058	285 aa		0.41	□□□□□ -2.34
NIP100	YPL174C	SDO1	Q07953	250 aa	Known RBP	0.41	□□□□□ -2.34
NIP100	YPL174C	YDL180W	Q12301	547 aa		0.41	□□□□□ -2.34
NIP100	YPL174C	RPL27B	P0C2H7	136 aa	Known RBP	0.41	□□□□□ -2.34
NIP100	YPL174C	TCP1	P12612	559 aa	Known RBP	0.41	□□□□□ -2.34
NIP100	YPL174C	RSR1	P13856	272 aa		0.41	□□□□□ -2.34
NIP100	YPL174C	POL30	P15873	258 aa	Known RBP	0.41	□□□□□ -2.34
NIP100	YPL174C	RIO2	P40160	425 aa	Known RBP	0.41	□□□□□ -2.34
NIP100	YPL174C	SPG3	Q04398	127 aa	Predicted RBP	0.41	□□□□□ -2.34
NIP100	YPL174C	ANT1	Q06497	328 aa		0.41	□□□□□ -2.34
NIP100	YPL174C	MSA1	Q08471	629 aa		0.41	□□□□□ -2.34
NIP100	YPL174C	SNT2	P53127	1403 aa		0.4	□□□□□ -2.34
NIP100	YPL174C	TFC1	P32367	649 aa		0.4	□□□□□ -2.34
NIP100	YPL174C	UPS2	P35200	230 aa		0.4	□□□□□ -2.34
NIP100	YPL174C	HUA1	P40325	198 aa		0.4	□□□□□ -2.34
NIP100	YPL174C	UBC7	Q02159	165 aa		0.4	□□□□□ -2.34
NIP100	YPL174C	LSO2	Q3E772	92 aa	Known RBP	0.4	□□□□□ -2.34
NIP100	YPL174C	YNL146C-A	Q3E7Z1	64 aa		0.4	□□□□□ -2.34
NIP100	YPL174C	SPP41	P38904	1435 aa		0.4	□□□□□ -2.35
NIP100	YPL174C	MRPL25	P23369	157 aa		0.4	□□□□□ -2.35
NIP100	YPL174C	MRPL28	P36527	147 aa		0.4	□□□□□ -2.35
NIP100	YPL174C	DOG2	P38773	246 aa		0.4	□□□□□ -2.35
NIP100	YPL174C	PRE6	P40303	254 aa	Known RBP	0.4	□□□□□ -2.35
NIP100	YPL174C	RSM25	P40496	264 aa		0.4	□□□□□ -2.35
NIP100	YPL174C	GLG2	P47011	380 aa		0.4	□□□□□ -2.35
NIP100	YPL174C	MPA43	P53583	542 aa	Predicted RBP	0.4	□□□□□ -2.35
NIP100	YPL174C	CSM4	Q08955	156 aa		0.4	□□□□□ -2.35
NIP100	YPL174C	MSH5	Q12175	901 aa		0.4	□□□□□ -2.35
NIP100	YPL174C	YER076C	P40049	302 aa		0.39	□□□□□ -2.35
NIP100	YPL174C	SOK1	P40317	901 aa		0.39	□□□□□ -2.35
NIP100	YPL174C	BOL2	P53082	120 aa		0.39	□□□□□ -2.35

Retrieved 100 of 5,963 RNA–protein pairs in 46.5 ms