RNA–Protein interactions for RNA: YPL104W

MSD1, Transcript of Mitochondrial aspartyl-tRNA synthetase, yeastyeast

Gene MSD1, Length 1,977 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSD1YPL104W ADO1P47143 340 aaKnown RBP3.14□□□□□ -1.91
MSD1YPL104W YGL159WP53110 370 aa3.14□□□□□ -1.91
MSD1YPL104W RNH201P53942 307 aa3.14□□□□□ -1.91
MSD1YPL104W YDR387CQ04162 555 aa3.14□□□□□ -1.91
MSD1YPL104W COQ11Q05892 277 aa3.14□□□□□ -1.91
MSD1YPL104W HRI1Q05905 244 aaKnown RBP3.14□□□□□ -1.91
MSD1YPL104W YDL086WQ07505 273 aa3.14□□□□□ -1.91
MSD1YPL104W MED7Q08278 222 aa3.14□□□□□ -1.91
MSD1YPL104W YNG1Q08465 219 aa3.14□□□□□ -1.91
MSD1YPL104W CSF1Q12150 2958 aa3.14□□□□□ -1.91
MSD1YPL104W MCT1Q12283 360 aa3.14□□□□□ -1.91
MSD1YPL104W ISN1Q99312 450 aa3.14□□□□□ -1.91
MSD1YPL104W PHO2P07269 559 aa3.13□□□□□ -1.91
MSD1YPL104W DSF1P0CX08 502 aa3.13□□□□□ -1.91
MSD1YPL104W YNR073CP0CX09 502 aa3.13□□□□□ -1.91
MSD1YPL104W RFA3P26755 122 aaKnown RBP3.13□□□□□ -1.91
MSD1YPL104W ACB1P31787 87 aa3.13□□□□□ -1.91
MSD1YPL104W ARO4P32449 370 aaKnown RBP3.13□□□□□ -1.91
MSD1YPL104W FMT1P32785 401 aa3.13□□□□□ -1.91
MSD1YPL104W YBL010CP32788 280 aa3.13□□□□□ -1.91
MSD1YPL104W FLO10P36170 1169 aa3.13□□□□□ -1.91
MSD1YPL104W MRPL27P36526 146 aaPredicted RBP3.13□□□□□ -1.91
MSD1YPL104W MRPL39P36533 70 aa3.13□□□□□ -1.91
MSD1YPL104W UMP1P38293 148 aa3.13□□□□□ -1.91
MSD1YPL104W PHM8P40025 321 aa3.13□□□□□ -1.91
MSD1YPL104W ATF1P40353 525 aa3.13□□□□□ -1.91
MSD1YPL104W ECM27P47144 725 aa3.13□□□□□ -1.91
MSD1YPL104W YNR048WP53740 393 aa3.13□□□□□ -1.91
MSD1YPL104W MRP51Q02950 344 aa3.13□□□□□ -1.91
MSD1YPL104W MRX9Q07349 420 aaKnown RBP3.13□□□□□ -1.91
MSD1YPL104W YOL024WQ08172 172 aa3.13□□□□□ -1.91
MSD1YPL104W USV1Q12132 391 aa3.13□□□□□ -1.91
MSD1YPL104W YDL180WQ12301 547 aa3.13□□□□□ -1.91
MSD1YPL104W RTR2Q12378 196 aa3.13□□□□□ -1.91
MSD1YPL104W PET20Q99373 253 aa3.13□□□□□ -1.91
MSD1YPL104W CDC39P25655 2108 aaKnown RBP3.13□□□□□ -1.91
MSD1YPL104W RPS16AP0CX51 143 aaKnown RBP3.12□□□□□ -1.91
MSD1YPL104W RPS16BP0CX52 143 aaKnown RBP3.12□□□□□ -1.91
MSD1YPL104W HNM1P19807 563 aa3.12□□□□□ -1.91
MSD1YPL104W CKS1P20486 150 aaKnown RBP3.12□□□□□ -1.91
MSD1YPL104W VMA16P23968 213 aa3.12□□□□□ -1.91
MSD1YPL104W VMA5P31412 392 aaKnown RBP3.12□□□□□ -1.91
MSD1YPL104W SIP1P32578 815 aa3.12□□□□□ -1.91
MSD1YPL104W PPZ2P33329 710 aa3.12□□□□□ -1.91
MSD1YPL104W PAN3P36102 679 aaPredicted RBP3.12□□□□□ -1.91
MSD1YPL104W VMA7P39111 118 aa3.12□□□□□ -1.91
MSD1YPL104W SWM2P40342 146 aa3.12□□□□□ -1.91
MSD1YPL104W AVT4P50944 713 aa3.12□□□□□ -1.91
MSD1YPL104W IZH2Q12442 317 aa3.12□□□□□ -1.91
MSD1YPL104W PRM4Q12498 284 aa3.12□□□□□ -1.91
MSD1YPL104W YBR298C-AQ8TGK4 73 aa3.12□□□□□ -1.91
MSD1YPL104W TDH3P00359 332 aaKnown RBP RIP-Chip data3.12□□□□□ -1.91not detected
MSD1YPL104W COX5BP00425 151 aa3.12□□□□□ -1.91
MSD1YPL104W TRP4P07285 380 aaPredicted RBP3.12□□□□□ -1.91
MSD1YPL104W PUT1P09368 476 aa3.12□□□□□ -1.91
MSD1YPL104W RPL30P14120 105 aaKnown RBP3.12□□□□□ -1.91
MSD1YPL104W SUA5P32579 426 aa3.12□□□□□ -1.91
MSD1YPL104W GEP4P38812 185 aa3.12□□□□□ -1.91
MSD1YPL104W YGR210CP42942 411 aa3.12□□□□□ -1.91
MSD1YPL104W YJL163CP46996 555 aa3.12□□□□□ -1.91
MSD1YPL104W SNX4P47057 423 aa3.12□□□□□ -1.91
MSD1YPL104W PHB2P50085 310 aa3.12□□□□□ -1.91
MSD1YPL104W NSA1P53136 463 aaPredicted RBP3.12□□□□□ -1.91
MSD1YPL104W YGR151CP53287 111 aa3.12□□□□□ -1.91
MSD1YPL104W OKP1P53298 406 aa3.12□□□□□ -1.91
MSD1YPL104W EOS1P53938 366 aa3.12□□□□□ -1.91
MSD1YPL104W SMX3P54999 86 aaPredicted RBP3.12□□□□□ -1.91
MSD1YPL104W HHT1P61830 136 aa3.12□□□□□ -1.91
MSD1YPL104W LAP3Q01532 483 aaKnown RBP RIP-Chip data3.12□□□□□ -1.91not detected
MSD1YPL104W PRM15Q03262 622 aa3.12□□□□□ -1.91
MSD1YPL104W YML018CQ03730 393 aa3.12□□□□□ -1.91
MSD1YPL104W YDR248CQ03786 193 aa3.12□□□□□ -1.91
MSD1YPL104W TMA10Q06177 86 aa3.12□□□□□ -1.91
MSD1YPL104W SYM1Q06563 197 aa3.12□□□□□ -1.91
MSD1YPL104W YPL278CQ08990 100 aa3.12□□□□□ -1.91
MSD1YPL104W USB1Q12208 290 aaKnown RBP3.12□□□□□ -1.91
MSD1YPL104W BBP1Q12365 385 aa3.12□□□□□ -1.91
MSD1YPL104W ATG31Q12421 196 aa3.12□□□□□ -1.91
MSD1YPL104W FMP16Q12497 93 aa3.12□□□□□ -1.91
MSD1YPL104W AAC1P04710 309 aa3.11□□□□□ -1.91
MSD1YPL104W CPR4P25334 318 aa3.11□□□□□ -1.91
MSD1YPL104W YCR016WP25617 290 aaKnown RBP3.11□□□□□ -1.91
MSD1YPL104W CMC1P36064 111 aa3.11□□□□□ -1.91
MSD1YPL104W MOH1P38191 138 aa3.11□□□□□ -1.91
MSD1YPL104W POP8P38208 133 aa3.11□□□□□ -1.91
MSD1YPL104W BFR1P38934 470 aaKnown RBP RIP-Chip data3.11□□□□□ -1.91not detected
MSD1YPL104W YND1P40009 630 aa3.11□□□□□ -1.91
MSD1YPL104W MOB2P43563 287 aa3.11□□□□□ -1.91
MSD1YPL104W GNA1P43577 159 aaPredicted RBP3.11□□□□□ -1.91
MSD1YPL104W RPS0BP46654 252 aaKnown RBP3.11□□□□□ -1.91
MSD1YPL104W JAC1P53193 184 aa3.11□□□□□ -1.91
MSD1YPL104W CAB5Q03941 241 aa3.11□□□□□ -1.91
MSD1YPL104W YDL242WQ07746 117 aa3.11□□□□□ -1.91
MSD1YPL104W RFU1Q08003 200 aa3.11□□□□□ -1.91
MSD1YPL104W HUT1Q12520 339 aa3.11□□□□□ -1.91
MSD1YPL104W YGL194C-AQ2V2P6 80 aa3.11□□□□□ -1.91
MSD1YPL104W TFB5Q3E7C1 72 aaPredicted RBP3.11□□□□□ -1.91
MSD1YPL104W RPL7AP05737 244 aaKnown RBP3.11□□□□□ -1.91
MSD1YPL104W MAG1P22134 296 aaKnown RBP3.11□□□□□ -1.91
MSD1YPL104W IFM1P25038 676 aa3.11□□□□□ -1.91
Retrieved 100 of 5,963 RNA–protein pairs in 21 ms