RNA–Protein interactions for RNA: YPL003W

ULA1, Transcript of Protein that activates Rub1p (NEDD8) before neddylation, yeast

Gene ULA1, Length 1,389 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ULA1	YPL003W	ARC40	P38328	384 aa	Known RBP	4.56	□□□□□ -1.68
ULA1	YPL003W	BFR1	P38934	470 aa	Known RBP RIP-Chip data	4.56	□□□□□ -1.68	not detected
ULA1	YPL003W	YER084W	P40057	128 aa		4.56	□□□□□ -1.68
ULA1	YPL003W	YER137C	P40083	148 aa	Known RBP	4.56	□□□□□ -1.68
ULA1	YPL003W	ATF1	P40353	525 aa		4.56	□□□□□ -1.68
ULA1	YPL003W	SYG1	P40528	902 aa		4.56	□□□□□ -1.68
ULA1	YPL003W	SSN8	P47821	323 aa		4.56	□□□□□ -1.68
ULA1	YPL003W	UFD1	P53044	361 aa		4.56	□□□□□ -1.68
ULA1	YPL003W	ALG9	P53868	555 aa	Known RBP	4.56	□□□□□ -1.68
ULA1	YPL003W	LAP3	Q01532	483 aa	Known RBP RIP-Chip data	4.56	□□□□□ -1.68	not detected
ULA1	YPL003W	SYM1	Q06563	197 aa		4.56	□□□□□ -1.68
ULA1	YPL003W	RRS1	Q08746	203 aa	Known RBP	4.56	□□□□□ -1.68
ULA1	YPL003W	SCP1	Q08873	200 aa		4.56	□□□□□ -1.68
ULA1	YPL003W	FIT3	Q08907	204 aa		4.56	□□□□□ -1.68
ULA1	YPL003W	COX17	Q12287	69 aa		4.56	□□□□□ -1.68
ULA1	YPL003W	TFB5	Q3E7C1	72 aa	Predicted RBP	4.56	□□□□□ -1.68
ULA1	YPL003W	GAL1	P04385	528 aa		4.55	□□□□□ -1.68
ULA1	YPL003W	MET3	P08536	511 aa		4.55	□□□□□ -1.68
ULA1	YPL003W	MSI1	P13712	422 aa		4.55	□□□□□ -1.68
ULA1	YPL003W	CKS1	P20486	150 aa	Known RBP	4.55	□□□□□ -1.68
ULA1	YPL003W	SAG1	P20840	650 aa		4.55	□□□□□ -1.68
ULA1	YPL003W	MAG1	P22134	296 aa	Known RBP	4.55	□□□□□ -1.68
ULA1	YPL003W	ATG15	P25641	520 aa		4.55	□□□□□ -1.68
ULA1	YPL003W	TRR1	P29509	319 aa	Known RBP	4.55	□□□□□ -1.68
ULA1	YPL003W	SUA5	P32579	426 aa		4.55	□□□□□ -1.68
ULA1	YPL003W	VMA8	P32610	256 aa	Known RBP	4.55	□□□□□ -1.68
ULA1	YPL003W	LAG1	P38703	411 aa		4.55	□□□□□ -1.68
ULA1	YPL003W	PTI1	P39927	425 aa	Predicted RBP	4.55	□□□□□ -1.68
ULA1	YPL003W	YIL029C	P40538	142 aa		4.55	□□□□□ -1.68
ULA1	YPL003W	GWT1	P47026	490 aa		4.55	□□□□□ -1.68
ULA1	YPL003W	SNX4	P47057	423 aa		4.55	□□□□□ -1.68
ULA1	YPL003W	YJR011C	P47086	261 aa	Predicted RBP	4.55	□□□□□ -1.68
ULA1	YPL003W	SIP18	P50263	79 aa		4.55	□□□□□ -1.68
ULA1	YPL003W	YIP5	P53108	310 aa		4.55	□□□□□ -1.68
ULA1	YPL003W	ACS1	Q01574	713 aa		4.55	□□□□□ -1.68
ULA1	YPL003W	CAB5	Q03941	241 aa		4.55	□□□□□ -1.68
ULA1	YPL003W	DLT1	Q04216	342 aa		4.55	□□□□□ -1.68
ULA1	YPL003W	COA4	Q05809	96 aa		4.55	□□□□□ -1.68
ULA1	YPL003W	YPR098C	Q06089	161 aa		4.55	□□□□□ -1.68
ULA1	YPL003W	VAM3	Q12241	283 aa		4.55	□□□□□ -1.68
ULA1	YPL003W	FOL3	Q12676	427 aa	Predicted RBP	4.55	□□□□□ -1.68
ULA1	YPL003W	PEX4	P29340	183 aa		4.54	□□□□□ -1.68
ULA1	YPL003W	CLB6	P32943	380 aa		4.54	□□□□□ -1.68
ULA1	YPL003W	NAT2	P37293	288 aa		4.54	□□□□□ -1.68
ULA1	YPL003W	SEN34	P39707	275 aa		4.54	□□□□□ -1.68
ULA1	YPL003W	PHM8	P40025	321 aa		4.54	□□□□□ -1.68
ULA1	YPL003W	GPP2	P40106	250 aa	Known RBP	4.54	□□□□□ -1.68
ULA1	YPL003W	PIG2	P40187	538 aa		4.54	□□□□□ -1.68
ULA1	YPL003W	CCS1	P40202	249 aa	Known RBP	4.54	□□□□□ -1.68
ULA1	YPL003W	OST1	P41543	476 aa	Known RBP	4.54	□□□□□ -1.68
ULA1	YPL003W	YGR210C	P42942	411 aa		4.54	□□□□□ -1.68
ULA1	YPL003W	NIF3	P53081	288 aa		4.54	□□□□□ -1.68
ULA1	YPL003W	YPL077C	Q02831	240 aa		4.54	□□□□□ -1.68
ULA1	YPL003W	RTT103	Q05543	409 aa		4.54	□□□□□ -1.68
ULA1	YPL003W	CRR1	Q05790	422 aa		4.54	□□□□□ -1.68
ULA1	YPL003W	ORM2	Q06144	216 aa		4.54	□□□□□ -1.68
ULA1	YPL003W	PIN3	Q06449	215 aa		4.54	□□□□□ -1.68
ULA1	YPL003W	YOR186W	Q08560	144 aa		4.54	□□□□□ -1.68
ULA1	YPL003W	FEX1	Q08913	375 aa		4.54	□□□□□ -1.68
ULA1	YPL003W	MED4	Q12343	284 aa		4.54	□□□□□ -1.68
ULA1	YPL003W	HUT1	Q12520	339 aa		4.54	□□□□□ -1.68
ULA1	YPL003W	UBA3	Q99344	299 aa		4.54	□□□□□ -1.68
ULA1	YPL003W	CKA1	P15790	372 aa		4.53	□□□□□ -1.68
ULA1	YPL003W	YCR061W	P25639	631 aa		4.53	□□□□□ -1.68
ULA1	YPL003W	POP8	P38208	133 aa		4.53	□□□□□ -1.68
ULA1	YPL003W	FAT1	P38225	669 aa		4.53	□□□□□ -1.68
ULA1	YPL003W	PRS2	P38620	318 aa	Known RBP	4.53	□□□□□ -1.68
ULA1	YPL003W	LNP1	P38878	278 aa		4.53	□□□□□ -1.68
ULA1	YPL003W	YER079W	P40052	210 aa	Known RBP	4.53	□□□□□ -1.68
ULA1	YPL003W	FLX1	P40464	311 aa		4.53	□□□□□ -1.68
ULA1	YPL003W	BMT5	P40493	336 aa		4.53	□□□□□ -1.68
ULA1	YPL003W	OKP1	P53298	406 aa		4.53	□□□□□ -1.68
ULA1	YPL003W	YDC1	Q02896	317 aa		4.53	□□□□□ -1.68
ULA1	YPL003W	YMR254C	Q04838	102 aa		4.53	□□□□□ -1.68
ULA1	YPL003W	EAF3	Q12432	401 aa		4.53	□□□□□ -1.68
ULA1	YPL003W	YLR365W	Q7LIF2	110 aa		4.53	□□□□□ -1.68
ULA1	YPL003W	YBR298C-A	Q8TGK4	73 aa		4.53	□□□□□ -1.68
ULA1	YPL003W	IPP1	P00817	287 aa	Known RBP	4.53	□□□□□ -1.69
ULA1	YPL003W	REP2	P03872	296 aa		4.53	□□□□□ -1.69
ULA1	YPL003W	QCR2	P07257	368 aa		4.53	□□□□□ -1.69
ULA1	YPL003W	FUS3	P16892	353 aa	Known RBP	4.53	□□□□□ -1.69
ULA1	YPL003W	OLE1	P21147	510 aa	Known RBP	4.53	□□□□□ -1.69
ULA1	YPL003W	MAK32	P23060	363 aa		4.53	□□□□□ -1.69
ULA1	YPL003W	MIR1	P23641	311 aa	Known RBP	4.53	□□□□□ -1.69
ULA1	YPL003W	GLC7	P32598	312 aa	Known RBP	4.53	□□□□□ -1.69
ULA1	YPL003W	FIG1	P38224	298 aa		4.53	□□□□□ -1.69
ULA1	YPL003W	COS8	P38723	381 aa		4.53	□□□□□ -1.69
ULA1	YPL003W	GEP4	P38812	185 aa		4.53	□□□□□ -1.69
ULA1	YPL003W	GPI16	P38875	610 aa		4.53	□□□□□ -1.69
ULA1	YPL003W	RPL13B	P40212	199 aa	Known RBP	4.53	□□□□□ -1.69
ULA1	YPL003W	YMR144W	P40214	342 aa	Known RBP	4.53	□□□□□ -1.69
ULA1	YPL003W	EGT2	P42835	1041 aa		4.53	□□□□□ -1.69
ULA1	YPL003W	MRX5	P47007	382 aa		4.53	□□□□□ -1.69
ULA1	YPL003W	SOL1	P50278	321 aa		4.53	□□□□□ -1.69
ULA1	YPL003W	UBC13	P52490	153 aa		4.53	□□□□□ -1.69
ULA1	YPL003W	JAC1	P53193	184 aa		4.53	□□□□□ -1.69
ULA1	YPL003W	SLX9	P53251	210 aa	Predicted RBP	4.53	□□□□□ -1.69
ULA1	YPL003W	NCE103	P53615	221 aa		4.53	□□□□□ -1.69
ULA1	YPL003W	GRC3	Q07845	632 aa		4.53	□□□□□ -1.69
ULA1	YPL003W	NCE102	Q12207	173 aa	RIP-Chip data	4.53	□□□□□ -1.69	not detected

Retrieved 100 of 5,963 RNA–protein pairs in 79.5 ms