RNA–Protein interactions for RNA: YPL002C

SNF8, Transcript of Component of the ESCRT-II complex, yeastyeast

Gene SNF8, Length 702 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNF8YPL002C HSP30P25619 332 aa3.44□□□□□ -1.86
SNF8YPL002C IDH1P28834 360 aaKnown RBP RIP-Chip data3.44□□□□□ -1.86not detected
SNF8YPL002C FUN26P31381 517 aa3.44□□□□□ -1.86
SNF8YPL002C VMA11P32842 164 aa3.44□□□□□ -1.86
SNF8YPL002C VAM7P32912 316 aa3.44□□□□□ -1.86
SNF8YPL002C CLG1P35190 452 aa3.44□□□□□ -1.86
SNF8YPL002C YPK3P38070 525 aa3.44□□□□□ -1.86
SNF8YPL002C POG1P40473 351 aa3.44□□□□□ -1.86
SNF8YPL002C SNL1P40548 159 aa3.44□□□□□ -1.86
SNF8YPL002C YGR201CP42936 225 aa3.44□□□□□ -1.86
SNF8YPL002C YAR1P46683 200 aa3.44□□□□□ -1.86
SNF8YPL002C YJR111CP47148 283 aaKnown RBP3.44□□□□□ -1.86
SNF8YPL002C TOS2P50078 622 aa3.44□□□□□ -1.86
SNF8YPL002C MRM2P53123 320 aa3.44□□□□□ -1.86
SNF8YPL002C YIP3P53633 176 aa3.44□□□□□ -1.86
SNF8YPL002C CWC27Q02770 301 aa3.44□□□□□ -1.86
SNF8YPL002C PET191Q02772 108 aa3.44□□□□□ -1.86
SNF8YPL002C YPL077CQ02831 240 aa3.44□□□□□ -1.86
SNF8YPL002C FAR8Q05040 523 aa3.44□□□□□ -1.86
SNF8YPL002C YPR127WQ06494 345 aa3.44□□□□□ -1.86
SNF8YPL002C MFG1Q07684 458 aa3.44□□□□□ -1.86
SNF8YPL002C YLR031WQ07978 186 aa3.44□□□□□ -1.86
SNF8YPL002C COQ10Q08058 207 aa3.44□□□□□ -1.86
SNF8YPL002C YOR343CQ12484 108 aa3.44□□□□□ -1.86
SNF8YPL002C YGR035W-AQ45U48 73 aa3.44□□□□□ -1.86
SNF8YPL002C YHR214C-EQ8TGK0 99 aa3.44□□□□□ -1.86
SNF8YPL002C MATALPHA1P0CY06 175 aa3.43□□□□□ -1.86
SNF8YPL002C HMLALPHA1P0CY07 175 aa3.43□□□□□ -1.86
SNF8YPL002C STE18P18852 110 aa3.43□□□□□ -1.86
SNF8YPL002C RNA15P25299 296 aaPredicted RBP3.43□□□□□ -1.86
SNF8YPL002C RPC19P28000 142 aaKnown RBP3.43□□□□□ -1.86
SNF8YPL002C ARP2P32381 391 aaKnown RBP3.43□□□□□ -1.86
SNF8YPL002C SPT10P35208 640 aa3.43□□□□□ -1.86
SNF8YPL002C SRL3P36167 246 aa3.43□□□□□ -1.86
SNF8YPL002C HEK2P38199 381 aaKnown RBP RIP-Chip data3.43□□□□□ -1.86 RIP-Chip
SNF8YPL002C RCK1P38622 512 aa3.43□□□□□ -1.86
SNF8YPL002C FCY21P40039 528 aa3.43□□□□□ -1.86
SNF8YPL002C YKE4P40544 346 aa3.43□□□□□ -1.86
SNF8YPL002C MOG1P47123 218 aa3.43□□□□□ -1.86
SNF8YPL002C RIB4P50861 169 aaPredicted RBP3.43□□□□□ -1.86
SNF8YPL002C GET1P53192 235 aa3.43□□□□□ -1.86
SNF8YPL002C SMM1P53720 384 aaKnown RBP3.43□□□□□ -1.86
SNF8YPL002C TMA20P89886 181 aaPredicted RBP3.43□□□□□ -1.86
SNF8YPL002C DXO1Q06349 442 aa3.43□□□□□ -1.86
SNF8YPL002C PAM18Q07914 168 aa3.43□□□□□ -1.86
SNF8YPL002C RFU1Q08003 200 aa3.43□□□□□ -1.86
SNF8YPL002C IZH2Q12442 317 aa3.43□□□□□ -1.86
SNF8YPL002C AGC1Q12482 902 aa3.43□□□□□ -1.86
SNF8YPL002C YBR298C-AQ8TGK4 73 aa3.43□□□□□ -1.86
SNF8YPL002C PET20Q99373 253 aa3.43□□□□□ -1.86
SNF8YPL002C TIM9O74700 87 aa3.42□□□□□ -1.86
SNF8YPL002C QCR7P00128 127 aa3.42□□□□□ -1.86
SNF8YPL002C ATP6P00854 259 aa3.42□□□□□ -1.86
SNF8YPL002C IFM1P25038 676 aa3.42□□□□□ -1.86
SNF8YPL002C SAC1P32368 623 aaKnown RBP3.42□□□□□ -1.86
SNF8YPL002C SSE2P32590 693 aaKnown RBP3.42□□□□□ -1.86
SNF8YPL002C TRS65P32893 560 aa3.42□□□□□ -1.86
SNF8YPL002C LHP1P33399 275 aaKnown RBP3.42□□□□□ -1.86
SNF8YPL002C JEN1P36035 616 aa3.42□□□□□ -1.86
SNF8YPL002C CMC1P36064 111 aa3.42□□□□□ -1.86
SNF8YPL002C RIB1P38066 345 aa3.42□□□□□ -1.86
SNF8YPL002C DER1P38307 211 aa3.42□□□□□ -1.86
SNF8YPL002C RRP4P38792 359 aaKnown RBP3.42□□□□□ -1.86
SNF8YPL002C SGN1P40561 250 aaKnown RBP RIP-Chip data3.42□□□□□ -1.86not detected
SNF8YPL002C GLR1P41921 483 aaKnown RBP3.42□□□□□ -1.86
SNF8YPL002C NUP57P48837 541 aa3.42□□□□□ -1.86
SNF8YPL002C NQM1P53228 333 aaPredicted RBP3.42□□□□□ -1.86
SNF8YPL002C FMN1Q03778 218 aa3.42□□□□□ -1.86
SNF8YPL002C YDR102CQ03864 110 aa3.42□□□□□ -1.86
SNF8YPL002C CAB5Q03941 241 aa3.42□□□□□ -1.86
SNF8YPL002C YDR387CQ04162 555 aa3.42□□□□□ -1.86
SNF8YPL002C NSL1Q12143 216 aa3.42□□□□□ -1.86
SNF8YPL002C BBP1Q12365 385 aa3.42□□□□□ -1.86
SNF8YPL002C YCL048W-AQ2V2Q2 79 aa3.42□□□□□ -1.86
SNF8YPL002C VCX1Q99385 411 aa3.42□□□□□ -1.86
SNF8YPL002C COX2P00410 251 aa3.41□□□□□ -1.86
SNF8YPL002C RPB8P20436 146 aa3.41□□□□□ -1.86
SNF8YPL002C SAG1P20840 650 aa3.41□□□□□ -1.86
SNF8YPL002C CCA1P21269 546 aa3.41□□□□□ -1.86
SNF8YPL002C CPR4P25334 318 aa3.41□□□□□ -1.86
SNF8YPL002C ELO2P25358 347 aa3.41□□□□□ -1.86
SNF8YPL002C TIM12P32830 109 aa3.41□□□□□ -1.86
SNF8YPL002C MCH2P36032 473 aa3.41□□□□□ -1.86
SNF8YPL002C PRY2P36110 329 aa3.41□□□□□ -1.86
SNF8YPL002C ECM8P38246 354 aa3.41□□□□□ -1.86
SNF8YPL002C YBR096WP38256 230 aa3.41□□□□□ -1.86
SNF8YPL002C LSM12P38828 187 aaKnown RBP3.41□□□□□ -1.86
SNF8YPL002C SRP14P38985 146 aa3.41□□□□□ -1.86
SNF8YPL002C BDH1P39714 382 aa3.41□□□□□ -1.86
SNF8YPL002C RMD6P39975 231 aa3.41□□□□□ -1.86
SNF8YPL002C BUR6P40096 142 aa3.41□□□□□ -1.86
SNF8YPL002C HXT14P42833 540 aa3.41□□□□□ -1.86
SNF8YPL002C BRR6P53062 197 aa3.41□□□□□ -1.86
SNF8YPL002C MPC1P53157 130 aaKnown RBP3.41□□□□□ -1.86
SNF8YPL002C GPI1P53306 609 aa3.41□□□□□ -1.86
SNF8YPL002C YNR064CP53750 290 aa3.41□□□□□ -1.86
SNF8YPL002C DYN2Q02647 92 aa3.41□□□□□ -1.86
SNF8YPL002C YMR279CQ03263 540 aa3.41□□□□□ -1.86
SNF8YPL002C IPK1Q06667 281 aa3.41□□□□□ -1.86
SNF8YPL002C PRP11Q07350 266 aaPredicted RBP3.41□□□□□ -1.86
Retrieved 100 of 5,963 RNA–protein pairs in 16.6 ms