RNA–Protein interactions for RNA: YOR138C

RUP1, Transcript of Protein that regulates ubiquitination of Rsp5p, yeastyeast

Gene RUP1, Length 2,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RUP1YOR138C WSC4P38739 605 aa6.54□□□□□ -1.36
RUP1YOR138C GNA1P43577 159 aaPredicted RBP6.54□□□□□ -1.36
RUP1YOR138C SUN4P53616 420 aa6.54□□□□□ -1.36
RUP1YOR138C SNP1Q00916 300 aaPredicted RBP6.54□□□□□ -1.36
RUP1YOR138C CMC2Q3E7A4 109 aa6.54□□□□□ -1.36
RUP1YOR138C SEC59P20048 519 aa6.54□□□□□ -1.36
RUP1YOR138C YBR013CP38215 129 aa6.54□□□□□ -1.36
RUP1YOR138C SLM1P40485 686 aa6.54□□□□□ -1.36
RUP1YOR138C GPP1P41277 250 aaKnown RBP6.54□□□□□ -1.36
RUP1YOR138C SKP1P52286 194 aa6.54□□□□□ -1.36
RUP1YOR138C YGL114WP53134 725 aa6.54□□□□□ -1.36
RUP1YOR138C YMR265CQ03508 461 aaKnown RBP6.54□□□□□ -1.36
RUP1YOR138C DIC1Q06143 298 aa6.54□□□□□ -1.36
RUP1YOR138C YLR030WQ07967 263 aa6.54□□□□□ -1.36
RUP1YOR138C RDL2Q08742 149 aaKnown RBP6.54□□□□□ -1.36
RUP1YOR138C YPR117WQ06116 2489 aa6.53□□□□□ -1.36
RUP1YOR138C SCEIP03882 235 aa6.53□□□□□ -1.36
RUP1YOR138C MET3P08536 511 aa6.53□□□□□ -1.36
RUP1YOR138C ELO2P25358 347 aa6.53□□□□□ -1.36
RUP1YOR138C CWP1P28319 239 aa6.53□□□□□ -1.36
RUP1YOR138C LAC1P28496 418 aa6.53□□□□□ -1.36
RUP1YOR138C REC114P32841 428 aa6.53□□□□□ -1.36
RUP1YOR138C MNS1P32906 549 aa6.53□□□□□ -1.36
RUP1YOR138C CLB6P32943 380 aa6.53□□□□□ -1.36
RUP1YOR138C MIA40P36046 403 aa6.53□□□□□ -1.36
RUP1YOR138C AIM3P38266 947 aaKnown RBP6.53□□□□□ -1.36
RUP1YOR138C FLO5P38894 1075 aa6.53□□□□□ -1.36
RUP1YOR138C YER158CP40095 573 aa6.53□□□□□ -1.36
RUP1YOR138C LTP1P40347 161 aa6.53□□□□□ -1.36
RUP1YOR138C CFD1P40558 293 aa6.53□□□□□ -1.36
RUP1YOR138C BSC5P53755 489 aa6.53□□□□□ -1.36
RUP1YOR138C TDH3P00359 332 aaKnown RBP RIP-Chip data6.52□□□□□ -1.37not detected
RUP1YOR138C GLC7P32598 312 aaKnown RBP6.52□□□□□ -1.37
RUP1YOR138C FAT1P38225 669 aa6.52□□□□□ -1.37
RUP1YOR138C YBR197CP38306 217 aa6.52□□□□□ -1.37
RUP1YOR138C YIL086CP40503 102 aa6.52□□□□□ -1.37
RUP1YOR138C YNR066CP53752 436 aa6.52□□□□□ -1.37
RUP1YOR138C MAP1Q01662 387 aaKnown RBP RIP-Chip data6.52□□□□□ -1.37not detected
RUP1YOR138C TSA2Q04120 196 aa6.52□□□□□ -1.37
RUP1YOR138C TDA6Q06466 467 aa6.52□□□□□ -1.37
RUP1YOR138C MRX9Q07349 420 aaKnown RBP6.52□□□□□ -1.37
RUP1YOR138C ISA2Q12425 185 aa6.52□□□□□ -1.37
RUP1YOR138C CYR1P08678 2026 aaKnown RBP6.52□□□□□ -1.37
RUP1YOR138C CDC36P06100 191 aaPredicted RBP6.52□□□□□ -1.37
RUP1YOR138C CKA1P15790 372 aa6.52□□□□□ -1.37
RUP1YOR138C YND1P40009 630 aa6.52□□□□□ -1.37
RUP1YOR138C GET2P40056 285 aa6.52□□□□□ -1.37
RUP1YOR138C CTK2P46962 323 aa6.52□□□□□ -1.37
RUP1YOR138C ALG12P53730 551 aa6.52□□□□□ -1.37
RUP1YOR138C SEN15Q04675 128 aa6.52□□□□□ -1.37
RUP1YOR138C YLR456WQ06199 204 aa6.52□□□□□ -1.37
RUP1YOR138C YPR063CQ12160 140 aa6.52□□□□□ -1.37
RUP1YOR138C SWM1Q12379 170 aa6.52□□□□□ -1.37
RUP1YOR138C YHR214C-EQ8TGK0 99 aa6.52□□□□□ -1.37
RUP1YOR138C POP5P28005 173 aa6.51□□□□□ -1.37
RUP1YOR138C EHD3P28817 500 aa6.51□□□□□ -1.37
RUP1YOR138C RPL14AP36105 138 aaKnown RBP6.51□□□□□ -1.37
RUP1YOR138C MRPL15P36523 253 aa6.51□□□□□ -1.37
RUP1YOR138C YBR292CP38357 123 aa6.51□□□□□ -1.37
RUP1YOR138C RPL14BP38754 138 aaKnown RBP6.51□□□□□ -1.37
RUP1YOR138C SHO1P40073 367 aa6.51□□□□□ -1.37
RUP1YOR138C YPS6P40583 537 aa6.51□□□□□ -1.37
RUP1YOR138C YJR012CP47087 207 aa6.51□□□□□ -1.37
RUP1YOR138C PUS4P48567 403 aaKnown RBP6.51□□□□□ -1.37
RUP1YOR138C YGL262WP53054 175 aa6.51□□□□□ -1.37
RUP1YOR138C PEF1P53238 335 aa6.51□□□□□ -1.37
RUP1YOR138C DIG2Q03373 323 aaKnown RBP6.51□□□□□ -1.37
RUP1YOR138C AGC1Q12482 902 aa6.51□□□□□ -1.37
RUP1YOR138C HUT1Q12520 339 aa6.51□□□□□ -1.37
RUP1YOR138C COX5BP00425 151 aa6.5□□□□□ -1.37
RUP1YOR138C SPO7P18410 259 aa6.5□□□□□ -1.37
RUP1YOR138C SCO1P23833 295 aa6.5□□□□□ -1.37
RUP1YOR138C MKK2P32491 506 aa6.5□□□□□ -1.37
RUP1YOR138C SWD2P36104 329 aaPredicted RBP6.5□□□□□ -1.37
RUP1YOR138C YIL077CP40508 320 aa6.5□□□□□ -1.37
RUP1YOR138C MOB2P43563 287 aa6.5□□□□□ -1.37
RUP1YOR138C SLX9P53251 210 aaPredicted RBP6.5□□□□□ -1.37
RUP1YOR138C YPL108WQ02872 168 aaPredicted RBP6.5□□□□□ -1.37
RUP1YOR138C TPP1Q03796 238 aa6.5□□□□□ -1.37
RUP1YOR138C YMR090WQ04304 227 aaKnown RBP6.5□□□□□ -1.37
RUP1YOR138C PML1Q07930 204 aaPredicted RBP6.5□□□□□ -1.37
RUP1YOR138C BDS1Q08347 646 aa6.5□□□□□ -1.37
RUP1YOR138C AIM45Q12480 344 aaKnown RBP6.5□□□□□ -1.37
RUP1YOR138C FAA1P30624 700 aaKnown RBP6.5□□□□□ -1.37
RUP1YOR138C PRS2P38620 318 aaKnown RBP6.5□□□□□ -1.37
RUP1YOR138C YER010CP40011 234 aa6.5□□□□□ -1.37
RUP1YOR138C FLX1P40464 311 aa6.5□□□□□ -1.37
RUP1YOR138C PAU15P40585 124 aa6.5□□□□□ -1.37
RUP1YOR138C MID1P41821 548 aa6.5□□□□□ -1.37
RUP1YOR138C BNS1P50084 137 aa6.5□□□□□ -1.37
RUP1YOR138C YMR210WQ03649 449 aa6.5□□□□□ -1.37
RUP1YOR138C YMR082CQ04276 118 aa6.5□□□□□ -1.37
RUP1YOR138C FSH2Q05015 223 aa6.5□□□□□ -1.37
RUP1YOR138C HRI1Q05905 244 aaKnown RBP6.5□□□□□ -1.37
RUP1YOR138C YDL242WQ07746 117 aa6.5□□□□□ -1.37
RUP1YOR138C SME1Q12330 94 aaPredicted RBP6.5□□□□□ -1.37
RUP1YOR138C FRE7Q12333 620 aa6.5□□□□□ -1.37
RUP1YOR138C COA2Q3E823 68 aa6.5□□□□□ -1.37
RUP1YOR138C YCR006CP25350 157 aa6.49□□□□□ -1.37
RUP1YOR138C ERG2P32352 222 aa6.49□□□□□ -1.37
Retrieved 100 of 5,963 RNA–protein pairs in 85.2 ms