RNA–Protein interactions for RNA: YNR006W

VPS27, Transcript of Endosomal protein that forms a complex with Hse1p, yeastyeast

Gene VPS27, Length 1,869 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS27YNR006W HRI1Q05905 244 aaKnown RBP3.12□□□□□ -1.91
VPS27YNR006W SMC4Q12267 1418 aa3.12□□□□□ -1.91
VPS27YNR006W EMP46Q12396 444 aa3.12□□□□□ -1.91
VPS27YNR006W IGO2Q9P305 131 aa3.12□□□□□ -1.91
VPS27YNR006W MYO4P32492 1471 aa3.12□□□□□ -1.91
VPS27YNR006W TRM732Q03496 1420 aa3.12□□□□□ -1.91
VPS27YNR006W ISY1P21374 235 aaPredicted RBP3.11□□□□□ -1.91
VPS27YNR006W SBH2P52871 88 aa3.11□□□□□ -1.91
VPS27YNR006W ERV29P53337 310 aa3.11□□□□□ -1.91
VPS27YNR006W ACT1P60010 375 aaKnown RBP3.11□□□□□ -1.91
VPS27YNR006W YDR115WQ04598 105 aa3.11□□□□□ -1.91
VPS27YNR006W YDR124WQ04608 324 aa3.11□□□□□ -1.91
VPS27YNR006W IRC25Q07951 179 aa3.11□□□□□ -1.91
VPS27YNR006W PDR15Q04182 1529 aaKnown RBP3.11□□□□□ -1.91
VPS27YNR006W DRS2P39524 1355 aa3.11□□□□□ -1.91
VPS27YNR006W SWI1P09547 1314 aa3.11□□□□□ -1.91
VPS27YNR006W TCA17P32613 152 aa3.11□□□□□ -1.91
VPS27YNR006W NUF2P33895 451 aa3.11□□□□□ -1.91
VPS27YNR006W SHE3P38272 425 aaKnown RBP3.11□□□□□ -1.91
VPS27YNR006W EDC2P40023 145 aaPredicted RBP3.11□□□□□ -1.91
VPS27YNR006W PDS1P40316 373 aaPredicted RBP3.11□□□□□ -1.91
VPS27YNR006W SOK1P40317 901 aa3.11□□□□□ -1.91
VPS27YNR006W YFH7P43591 353 aa3.11□□□□□ -1.91
VPS27YNR006W AIM25P47140 327 aa3.11□□□□□ -1.91
VPS27YNR006W YNL184CP53876 108 aa3.11□□□□□ -1.91
VPS27YNR006W INP1Q03694 420 aa3.11□□□□□ -1.91
VPS27YNR006W YLR036CQ07986 203 aa3.11□□□□□ -1.91
VPS27YNR006W ESC1Q03661 1658 aaKnown RBP3.11□□□□□ -1.91
VPS27YNR006W TY1B-JR2P47100 1755 aaKnown RBP3.1□□□□□ -1.91
VPS27YNR006W TY1B-ER2Q03619 1755 aa3.1□□□□□ -1.91
VPS27YNR006W TY1B-MR1Q04214 1755 aa3.1□□□□□ -1.91
VPS27YNR006W TY1B-MR2Q04670 1755 aaKnown RBP3.1□□□□□ -1.91
VPS27YNR006W TY1B-LR1Q12088 1755 aaKnown RBP3.1□□□□□ -1.91
VPS27YNR006W TY1B-NL1Q12112 1755 aa3.1□□□□□ -1.91
VPS27YNR006W TY1B-GR1Q12141 1755 aa3.1□□□□□ -1.91
VPS27YNR006W TY1B-BLQ12490 1755 aa3.1□□□□□ -1.91
VPS27YNR006W AAT2P23542 418 aaKnown RBP3.1□□□□□ -1.91
VPS27YNR006W YCR090CP25654 182 aaKnown RBP3.1□□□□□ -1.91
VPS27YNR006W MDH3P32419 343 aaKnown RBP RIP-Chip data3.1□□□□□ -1.91not detected
VPS27YNR006W PRY2P36110 329 aa3.1□□□□□ -1.91
VPS27YNR006W DOG1P38774 246 aa3.1□□□□□ -1.91
VPS27YNR006W MIG3P39943 394 aa3.1□□□□□ -1.91
VPS27YNR006W LSM7P53905 115 aaKnown RBP3.1□□□□□ -1.91
VPS27YNR006W RPL21AQ02753 160 aaKnown RBP3.1□□□□□ -1.91
VPS27YNR006W NNT1Q05874 261 aa3.1□□□□□ -1.91
VPS27YNR006W YLR053CQ12026 108 aa3.1□□□□□ -1.91
VPS27YNR006W TIM22Q12328 207 aa3.1□□□□□ -1.91
VPS27YNR006W RDI1Q12434 202 aa3.1□□□□□ -1.91
VPS27YNR006W YBL008W-AQ3E821 79 aa3.1□□□□□ -1.91
VPS27YNR006W ULS1Q08562 1619 aa3.09□□□□□ -1.91
VPS27YNR006W RPS28BP0C0X0 67 aaKnown RBP3.09□□□□□ -1.91
VPS27YNR006W TRX3P25372 127 aa3.09□□□□□ -1.91
VPS27YNR006W ERG2P32352 222 aa3.09□□□□□ -1.91
VPS27YNR006W CSG2P35206 410 aa3.09□□□□□ -1.91
VPS27YNR006W OM14P38325 134 aa3.09□□□□□ -1.91
VPS27YNR006W PHO89P38361 574 aa3.09□□□□□ -1.91
VPS27YNR006W GGC1P38988 300 aa3.09□□□□□ -1.91
VPS27YNR006W RSM25P40496 264 aa3.09□□□□□ -1.91
VPS27YNR006W PRM10P42946 383 aa3.09□□□□□ -1.91
VPS27YNR006W VHS1Q03785 461 aa3.09□□□□□ -1.91
VPS27YNR006W EMI1Q04406 187 aa3.09□□□□□ -1.91
VPS27YNR006W API2Q04413 109 aa3.09□□□□□ -1.91
VPS27YNR006W YPR127WQ06494 345 aa3.09□□□□□ -1.91
VPS27YNR006W YOL160WQ08321 113 aa3.09□□□□□ -1.91
VPS27YNR006W YPR011CQ12251 326 aa3.09□□□□□ -1.91
VPS27YNR006W RPS28AQ3E7X9 67 aaPredicted RBP3.09□□□□□ -1.91
VPS27YNR006W CDC25P04821 1589 aa3.09□□□□□ -1.91
VPS27YNR006W NVJ1P38881 321 aa3.09□□□□□ -1.92
VPS27YNR006W AVT6P40074 448 aa3.09□□□□□ -1.92
VPS27YNR006W CAT5P41735 233 aa3.09□□□□□ -1.92
VPS27YNR006W YPL039WQ03080 316 aa3.09□□□□□ -1.92
VPS27YNR006W ATG5Q12380 294 aa3.09□□□□□ -1.92
VPS27YNR006W YHR214C-EQ8TGK0 99 aa3.09□□□□□ -1.92
VPS27YNR006W YBR298C-AQ8TGK4 73 aa3.09□□□□□ -1.92
VPS27YNR006W SPP41P38904 1435 aa3.08□□□□□ -1.92
VPS27YNR006W SPT15P13393 240 aaKnown RBP3.08□□□□□ -1.92
VPS27YNR006W YBL059WP34224 193 aa3.08□□□□□ -1.92
VPS27YNR006W ZRT3P34240 503 aa3.08□□□□□ -1.92
VPS27YNR006W MOG1P47123 218 aa3.08□□□□□ -1.92
VPS27YNR006W PPT2Q12036 173 aa3.08□□□□□ -1.92
VPS27YNR006W NOT5Q12514 560 aaPredicted RBP3.08□□□□□ -1.92
VPS27YNR006W VTH1P40438 1549 aa3.08□□□□□ -1.92
VPS27YNR006W VTH2P40890 1549 aa3.08□□□□□ -1.92
VPS27YNR006W YCR023CP25351 611 aa3.07□□□□□ -1.92
VPS27YNR006W PTM1P32857 523 aa3.07□□□□□ -1.92
VPS27YNR006W SMP1P38128 452 aa3.07□□□□□ -1.92
VPS27YNR006W YHI9P38765 294 aa3.07□□□□□ -1.92
VPS27YNR006W KRE9P39005 276 aa3.07□□□□□ -1.92
VPS27YNR006W LSM4P40070 187 aaKnown RBP3.07□□□□□ -1.92
VPS27YNR006W IGD1P43598 195 aa3.07□□□□□ -1.92
VPS27YNR006W FLC3P53121 802 aa3.07□□□□□ -1.92
VPS27YNR006W HST4P53688 370 aa3.07□□□□□ -1.92
VPS27YNR006W SWT21P53873 357 aaPredicted RBP3.07□□□□□ -1.92
VPS27YNR006W COG5P53951 403 aa3.07□□□□□ -1.92
VPS27YNR006W HSK3P69852 69 aa3.07□□□□□ -1.92
VPS27YNR006W DYN3Q04949 312 aa3.07□□□□□ -1.92
VPS27YNR006W ECM19Q06011 112 aa3.07□□□□□ -1.92
VPS27YNR006W YLR179CQ06252 201 aaKnown RBP3.07□□□□□ -1.92
VPS27YNR006W YLR030WQ07967 263 aa3.07□□□□□ -1.92
VPS27YNR006W YPS3Q12303 508 aa3.07□□□□□ -1.92
Retrieved 100 of 5,963 RNA–protein pairs in 21.8 ms