RNA–Protein interactions for RNA: YML112W

CTK3, Transcript of Gamma subunit of C-terminal domain kinase I, yeastyeast

Gene CTK3, Length 891 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTK3YML112W CDC7P06243 507 aa1.14□□□□□ -2.23
CTK3YML112W YMR31P19955 123 aa1.14□□□□□ -2.23
CTK3YML112W MEI4P29467 408 aa1.14□□□□□ -2.23
CTK3YML112W MRPL39P36533 70 aa1.14□□□□□ -2.23
CTK3YML112W URA8P38627 578 aaPredicted RBP1.14□□□□□ -2.23
CTK3YML112W SEC72P39742 193 aaKnown RBP1.14□□□□□ -2.23
CTK3YML112W YEL075CP39972 122 aa1.14□□□□□ -2.23
CTK3YML112W YER189WP40104 122 aa1.14□□□□□ -2.23
CTK3YML112W BMT5P40493 336 aa1.14□□□□□ -2.23
CTK3YML112W RSM25P40496 264 aa1.14□□□□□ -2.23
CTK3YML112W YRB1P41920 201 aaKnown RBP1.14□□□□□ -2.23
CTK3YML112W RPL9BP51401 191 aaKnown RBP1.14□□□□□ -2.23
CTK3YML112W YGR219WP53307 113 aa1.14□□□□□ -2.23
CTK3YML112W YNR062CP53748 327 aa1.14□□□□□ -2.23
CTK3YML112W ALG11P53954 548 aaKnown RBP1.14□□□□□ -2.23
CTK3YML112W RSM10Q03201 203 aa1.14□□□□□ -2.23
CTK3YML112W FAR8Q05040 523 aa1.14□□□□□ -2.23
CTK3YML112W INM2Q05533 292 aa1.14□□□□□ -2.23
CTK3YML112W SDO1Q07953 250 aaKnown RBP1.14□□□□□ -2.23
CTK3YML112W MSH5Q12175 901 aa1.14□□□□□ -2.23
CTK3YML112W DCN1Q12395 269 aa1.14□□□□□ -2.23
CTK3YML112W SNF8Q12483 233 aa1.14□□□□□ -2.23
CTK3YML112W QCR7P00128 127 aa1.13□□□□□ -2.23
CTK3YML112W RPL27AP0C2H6 136 aaKnown RBP1.13□□□□□ -2.23
CTK3YML112W RPL27BP0C2H7 136 aaKnown RBP1.13□□□□□ -2.23
CTK3YML112W STE18P18852 110 aa1.13□□□□□ -2.23
CTK3YML112W SCL1P21243 252 aaKnown RBP1.13□□□□□ -2.23
CTK3YML112W RFA3P26755 122 aaKnown RBP1.13□□□□□ -2.23
CTK3YML112W ATP7P30902 174 aa1.13□□□□□ -2.23
CTK3YML112W YKR045CP36138 183 aa1.13□□□□□ -2.23
CTK3YML112W AME1P38313 324 aa1.13□□□□□ -2.23
CTK3YML112W PRS2P38620 318 aaKnown RBP1.13□□□□□ -2.23
CTK3YML112W DOG1P38774 246 aa1.13□□□□□ -2.23
CTK3YML112W YHR125WP38831 101 aa1.13□□□□□ -2.23
CTK3YML112W DSE2P38844 325 aa1.13□□□□□ -2.23
CTK3YML112W EGD2P38879 174 aaKnown RBP1.13□□□□□ -2.23
CTK3YML112W SNZ3P43545 298 aa1.13□□□□□ -2.23
CTK3YML112W YAR1P46683 200 aa1.13□□□□□ -2.23
CTK3YML112W GLG2P47011 380 aa1.13□□□□□ -2.23
CTK3YML112W YJR056CP47115 236 aa1.13□□□□□ -2.23
CTK3YML112W YGL235WP53071 178 aa1.13□□□□□ -2.23
CTK3YML112W ALG13P53178 202 aa1.13□□□□□ -2.23
CTK3YML112W SNZ2P53824 298 aa1.13□□□□□ -2.23
CTK3YML112W YDC1Q02896 317 aa1.13□□□□□ -2.23
CTK3YML112W YDR209CQ03480 137 aa1.13□□□□□ -2.23
CTK3YML112W MRPS8Q03799 155 aa1.13□□□□□ -2.23
CTK3YML112W YML096WQ04489 525 aa1.13□□□□□ -2.23
CTK3YML112W SPC2Q04969 178 aa1.13□□□□□ -2.23
CTK3YML112W YLR179CQ06252 201 aaKnown RBP1.13□□□□□ -2.23
CTK3YML112W SYC1Q08553 188 aaPredicted RBP1.13□□□□□ -2.23
CTK3YML112W RIO1Q12196 484 aaKnown RBP1.13□□□□□ -2.23
CTK3YML112W SNA3P14359 133 aa1.12□□□□□ -2.23
CTK3YML112W SEN2P16658 377 aa1.12□□□□□ -2.23
CTK3YML112W RPL24BP24000 155 aaKnown RBP1.12□□□□□ -2.23
CTK3YML112W EHD3P28817 500 aa1.12□□□□□ -2.23
CTK3YML112W VMA6P32366 345 aaKnown RBP1.12□□□□□ -2.23
CTK3YML112W FIG1P38224 298 aa1.12□□□□□ -2.23
CTK3YML112W PHO88P38264 188 aaPredicted RBP1.12□□□□□ -2.23
CTK3YML112W SRP14P38985 146 aa1.12□□□□□ -2.23
CTK3YML112W THO1P40040 218 aaKnown RBP1.12□□□□□ -2.23
CTK3YML112W YIL001WP40560 513 aa1.12□□□□□ -2.23
CTK3YML112W JHD2P47156 728 aaPredicted RBP1.12□□□□□ -2.23
CTK3YML112W YDR248CQ03786 193 aa1.12□□□□□ -2.23
CTK3YML112W YLR283WQ05867 314 aa1.12□□□□□ -2.23
CTK3YML112W RRP40Q08285 240 aaKnown RBP1.12□□□□□ -2.23
CTK3YML112W NCB2Q92317 146 aa1.12□□□□□ -2.23
CTK3YML112W PET20Q99373 253 aa1.12□□□□□ -2.23
CTK3YML112W SIR4P11978 1358 aa1.11□□□□□ -2.23
CTK3YML112W YBR121C-AP0C5L4 52 aa1.11□□□□□ -2.23
CTK3YML112W RPO26P20435 155 aa1.11□□□□□ -2.23
CTK3YML112W DAL82P21705 255 aa1.11□□□□□ -2.23
CTK3YML112W IDH1P28834 360 aaKnown RBP RIP-Chip data1.11□□□□□ -2.23not detected
CTK3YML112W SPS18P32572 300 aa1.11□□□□□ -2.23
CTK3YML112W SGE1P33335 543 aa1.11□□□□□ -2.23
CTK3YML112W YBR096WP38256 230 aa1.11□□□□□ -2.23
CTK3YML112W OPY1P38271 328 aa1.11□□□□□ -2.23
CTK3YML112W ERV15P38312 142 aa1.11□□□□□ -2.23
CTK3YML112W PET100P38958 111 aa1.11□□□□□ -2.23
CTK3YML112W EDC3P39998 551 aaKnown RBP1.11□□□□□ -2.23
CTK3YML112W YER135CP40082 130 aa1.11□□□□□ -2.23
CTK3YML112W SOK1P40317 901 aa1.11□□□□□ -2.23
CTK3YML112W POG1P40473 351 aa1.11□□□□□ -2.23
CTK3YML112W FIS1P40515 155 aa1.11□□□□□ -2.23
CTK3YML112W HOC1P47124 396 aa1.11□□□□□ -2.23
CTK3YML112W ADO1P47143 340 aaKnown RBP1.11□□□□□ -2.23
CTK3YML112W YJR111CP47148 283 aaKnown RBP1.11□□□□□ -2.23
CTK3YML112W MRH4P53166 561 aa1.11□□□□□ -2.23
CTK3YML112W CYT2Q00873 224 aa1.11□□□□□ -2.23
CTK3YML112W SNO1Q03144 224 aa1.11□□□□□ -2.23
CTK3YML112W MZM1Q03429 123 aaPredicted RBP1.11□□□□□ -2.23
CTK3YML112W ADH6Q04894 360 aaKnown RBP1.11□□□□□ -2.23
CTK3YML112W YMR226CQ05016 267 aaKnown RBP1.11□□□□□ -2.23
CTK3YML112W RFU1Q08003 200 aa1.11□□□□□ -2.23
CTK3YML112W USB1Q12208 290 aaKnown RBP1.11□□□□□ -2.23
CTK3YML112W SEY1Q99287 776 aa1.11□□□□□ -2.23
CTK3YML112W ECM5Q03214 1411 aa1.11□□□□□ -2.23
CTK3YML112W MSW1P04803 379 aa1.1□□□□□ -2.23
CTK3YML112W QCR2P07257 368 aa1.1□□□□□ -2.23
CTK3YML112W YKR104WP0CE69 306 aa1.1□□□□□ -2.23
CTK3YML112W GCY1P14065 312 aaKnown RBP RIP-Chip data1.1□□□□□ -2.23not detected
Retrieved 100 of 5,963 RNA–protein pairs in 230.7 ms