RNA–Protein interactions for RNA: YML029W

USA1, Transcript of Scaffold subunit of the Hrd1p ubiquitin ligase, yeastyeast

Gene USA1, Length 2,517 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
USA1YML029W GPI14P47088 403 aaKnown RBP3.33□□□□□ -1.88
USA1YML029W SSN8P47821 323 aa3.33□□□□□ -1.88
USA1YML029W SMX3P54999 86 aaPredicted RBP3.33□□□□□ -1.88
USA1YML029W MRPL13Q02204 264 aa3.33□□□□□ -1.88
USA1YML029W HNT1Q04344 158 aaKnown RBP3.33□□□□□ -1.88
USA1YML029W UPS1Q05776 175 aa3.33□□□□□ -1.88
USA1YML029W PIN3Q06449 215 aa3.33□□□□□ -1.88
USA1YML029W CDC28P00546 298 aaKnown RBP3.32□□□□□ -1.88
USA1YML029W URA3P03962 267 aa3.32□□□□□ -1.88
USA1YML029W MCH2P36032 473 aa3.32□□□□□ -1.88
USA1YML029W BMT5P40493 336 aa3.32□□□□□ -1.88
USA1YML029W YIL060WP40519 144 aa3.32□□□□□ -1.88
USA1YML029W OST1P41543 476 aaKnown RBP3.32□□□□□ -1.88
USA1YML029W YJL016WP47072 561 aa3.32□□□□□ -1.88
USA1YML029W UFD1P53044 361 aa3.32□□□□□ -1.88
USA1YML029W FMP48P53233 369 aa3.32□□□□□ -1.88
USA1YML029W RNH201P53942 307 aa3.32□□□□□ -1.88
USA1YML029W CRZ1P53968 678 aa3.32□□□□□ -1.88
USA1YML029W ERV25P54837 211 aaKnown RBP3.32□□□□□ -1.88
USA1YML029W BUD25P85052 153 aa3.32□□□□□ -1.88
USA1YML029W CTF19Q02732 369 aa3.32□□□□□ -1.88
USA1YML029W PRP11Q07350 266 aaPredicted RBP3.32□□□□□ -1.88
USA1YML029W NCE102Q12207 173 aaRIP-Chip data3.32□□□□□ -1.88not detected
USA1YML029W SPS2P08459 502 aa3.32□□□□□ -1.88
USA1YML029W ERG3P32353 365 aa3.32□□□□□ -1.88
USA1YML029W YHR122WP38829 231 aa3.32□□□□□ -1.88
USA1YML029W PHB2P50085 310 aa3.32□□□□□ -1.88
USA1YML029W TY1A-DR2Q03964 440 aaKnown RBP3.32□□□□□ -1.88
USA1YML029W HTZ1Q12692 134 aaKnown RBP3.32□□□□□ -1.88
USA1YML029W RPL15AP05748 204 aaKnown RBP3.31□□□□□ -1.88
USA1YML029W RPL3P14126 387 aaKnown RBP3.31□□□□□ -1.88
USA1YML029W SAG1P20840 650 aa3.31□□□□□ -1.88
USA1YML029W OLE1P21147 510 aaKnown RBP3.31□□□□□ -1.88
USA1YML029W SWD2P36104 329 aaPredicted RBP3.31□□□□□ -1.88
USA1YML029W UMP1P38293 148 aa3.31□□□□□ -1.88
USA1YML029W YBR242WP38331 238 aa3.31□□□□□ -1.88
USA1YML029W AIM25P47140 327 aa3.31□□□□□ -1.88
USA1YML029W BXI1P48558 297 aa3.31□□□□□ -1.88
USA1YML029W UBC13P52490 153 aa3.31□□□□□ -1.88
USA1YML029W RPL15BP54780 204 aaPredicted RBP3.31□□□□□ -1.88
USA1YML029W UTP15Q04305 513 aaKnown RBP3.31□□□□□ -1.88
USA1YML029W ODC2Q99297 307 aa3.31□□□□□ -1.88
USA1YML029W PRP8P33334 2413 aaKnown RBP3.31□□□□□ -1.88
USA1YML029W DIF1O13577 133 aa3.31□□□□□ -1.88
USA1YML029W PET494P07390 489 aaPredicted RBP3.31□□□□□ -1.88
USA1YML029W GCN3P14741 305 aa3.31□□□□□ -1.88
USA1YML029W CPR4P25334 318 aa3.31□□□□□ -1.88
USA1YML029W ACH1P32316 526 aa3.31□□□□□ -1.88
USA1YML029W ARO4P32449 370 aaKnown RBP3.31□□□□□ -1.88
USA1YML029W GLC7P32598 312 aaKnown RBP3.31□□□□□ -1.88
USA1YML029W MTC7P32633 139 aa3.31□□□□□ -1.88
USA1YML029W SRL3P36167 246 aa3.31□□□□□ -1.88
USA1YML029W NAT2P37293 288 aa3.31□□□□□ -1.88
USA1YML029W PRS2P38620 318 aaKnown RBP3.31□□□□□ -1.88
USA1YML029W PAC2P39937 518 aa3.31□□□□□ -1.88
USA1YML029W PCL7P40186 285 aa3.31□□□□□ -1.88
USA1YML029W ATF1P40353 525 aa3.31□□□□□ -1.88
USA1YML029W SGN1P40561 250 aaKnown RBP RIP-Chip data3.31□□□□□ -1.88not detected
USA1YML029W OTU1P43558 301 aa3.31□□□□□ -1.88
USA1YML029W MRX5P47007 382 aa3.31□□□□□ -1.88
USA1YML029W DIE2P50076 525 aa3.31□□□□□ -1.88
USA1YML029W TAF4P50105 388 aa3.31□□□□□ -1.88
USA1YML029W GEP7P53171 287 aa3.31□□□□□ -1.88
USA1YML029W YGR042WP53227 271 aa3.31□□□□□ -1.88
USA1YML029W SKO1Q02100 647 aa3.31□□□□□ -1.88
USA1YML029W MRPS16Q02608 121 aa3.31□□□□□ -1.88
USA1YML029W YLR283WQ05867 314 aa3.31□□□□□ -1.88
USA1YML029W LIP2Q06005 328 aa3.31□□□□□ -1.88
USA1YML029W YOR352WQ08816 343 aa3.31□□□□□ -1.88
USA1YML029W YOR385WQ08909 290 aa3.31□□□□□ -1.88
USA1YML029W GCD1P09032 578 aaPredicted RBP3.3□□□□□ -1.88
USA1YML029W URA6P15700 204 aa3.3□□□□□ -1.88
USA1YML029W CDC23P16522 626 aa3.3□□□□□ -1.88
USA1YML029W ATG22P25568 528 aa3.3□□□□□ -1.88
USA1YML029W RNP1P32385 249 aa3.3□□□□□ -1.88
USA1YML029W MRPL3P36516 390 aa3.3□□□□□ -1.88
USA1YML029W GWT1P47026 490 aa3.3□□□□□ -1.88
USA1YML029W SED1Q01589 338 aa3.3□□□□□ -1.88
USA1YML029W TY1A-MR1Q04215 440 aa3.3□□□□□ -1.88
USA1YML029W GAT3Q07928 141 aa3.3□□□□□ -1.88
USA1YML029W YOR097CQ12274 175 aaPredicted RBP3.3□□□□□ -1.88
USA1YML029W STF1P01098 86 aa3.3□□□□□ -1.88
USA1YML029W NHP6BP11633 99 aaKnown RBP3.3□□□□□ -1.88
USA1YML029W YCP4P25349 247 aaKnown RBP3.3□□□□□ -1.88
USA1YML029W YUH1P35127 236 aa3.3□□□□□ -1.88
USA1YML029W CPR5P35176 225 aa3.3□□□□□ -1.88
USA1YML029W GPI18P38211 433 aa3.3□□□□□ -1.88
USA1YML029W SMM1P53720 384 aaKnown RBP3.3□□□□□ -1.88
USA1YML029W YLR031WQ07978 186 aa3.3□□□□□ -1.88
USA1YML029W AAC1P04710 309 aa3.29□□□□□ -1.88
USA1YML029W ARG80P07249 177 aa3.29□□□□□ -1.88
USA1YML029W RNA14P25298 677 aaKnown RBP3.29□□□□□ -1.88
USA1YML029W GAR1P28007 205 aaKnown RBP3.29□□□□□ -1.88
USA1YML029W VMA5P31412 392 aaKnown RBP3.29□□□□□ -1.88
USA1YML029W RPD3P32561 433 aa3.29□□□□□ -1.88
USA1YML029W YND1P40009 630 aa3.29□□□□□ -1.88
USA1YML029W TEX1P53851 422 aaKnown RBP3.29□□□□□ -1.88
USA1YML029W PRM15Q03262 622 aa3.29□□□□□ -1.88
USA1YML029W YOL029CQ08187 201 aa3.29□□□□□ -1.88
USA1YML029W DGK1Q12382 290 aa3.29□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 27 ms