RNA–Protein interactions for RNA: YLR360W

VPS38, Transcript of Part of a Vps34p phosphatidylinositol 3-kinase complex, yeastyeast

Gene VPS38, Length 1,320 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS38YLR360W RSR1P13856 272 aa1.73□□□□□ -2.13
VPS38YLR360W SEC22P22214 214 aa1.73□□□□□ -2.13
VPS38YLR360W VPS3P23643 1011 aa1.73□□□□□ -2.13
VPS38YLR360W RPC19P28000 142 aaKnown RBP1.73□□□□□ -2.13
VPS38YLR360W UBC6P33296 250 aaPredicted RBP1.73□□□□□ -2.13
VPS38YLR360W PHB1P40961 287 aa1.73□□□□□ -2.13
VPS38YLR360W ALG11P53954 548 aaKnown RBP1.73□□□□□ -2.13
VPS38YLR360W COX20Q04935 205 aa1.73□□□□□ -2.13
VPS38YLR360W ATG38Q05789 226 aaKnown RBP1.73□□□□□ -2.13
VPS38YLR360W YOR289WQ12012 251 aaPredicted RBP1.73□□□□□ -2.13
VPS38YLR360W SNT2P53127 1403 aa1.73□□□□□ -2.13
VPS38YLR360W POL1P13382 1468 aa1.73□□□□□ -2.13
VPS38YLR360W YOR1P53049 1477 aa1.73□□□□□ -2.13
VPS38YLR360W SNQ2P32568 1501 aaKnown RBP1.73□□□□□ -2.13
VPS38YLR360W CCA1P21269 546 aa1.72□□□□□ -2.13
VPS38YLR360W RIB7P33312 244 aa1.72□□□□□ -2.13
VPS38YLR360W PRS4P38063 326 aaPredicted RBP1.72□□□□□ -2.13
VPS38YLR360W YBR242WP38331 238 aa1.72□□□□□ -2.13
VPS38YLR360W LSM4P40070 187 aaKnown RBP1.72□□□□□ -2.13
VPS38YLR360W GCN20P43535 752 aaKnown RBP1.72□□□□□ -2.13
VPS38YLR360W APS3P47064 194 aa1.72□□□□□ -2.13
VPS38YLR360W RBL2P48606 106 aaKnown RBP1.72□□□□□ -2.13
VPS38YLR360W YGL034CP53186 121 aa1.72□□□□□ -2.13
VPS38YLR360W EFM5P53200 248 aaKnown RBP1.72□□□□□ -2.13
VPS38YLR360W DYN3Q04949 312 aa1.72□□□□□ -2.13
VPS38YLR360W FAR8Q05040 523 aa1.72□□□□□ -2.13
VPS38YLR360W YPR147CQ06522 304 aaKnown RBP1.72□□□□□ -2.13
VPS38YLR360W LSO2Q3E772 92 aaKnown RBP1.72□□□□□ -2.13
VPS38YLR360W TUS1Q06412 1307 aa1.72□□□□□ -2.13
VPS38YLR360W YSP2Q06681 1438 aa1.72□□□□□ -2.13
VPS38YLR360W TY1B-NL2Q99337 1749 aaKnown RBP1.72□□□□□ -2.13
VPS38YLR360W NUP188P52593 1655 aaKnown RBP1.71□□□□□ -2.14
VPS38YLR360W TY3B-IQ7LHG5 1498 aaKnown RBP1.71□□□□□ -2.14
VPS38YLR360W YHR032W-AP0C5N6 59 aa1.71□□□□□ -2.14
VPS38YLR360W UTP11P34247 250 aaPredicted RBP1.71□□□□□ -2.14
VPS38YLR360W VPS51P36116 164 aa1.71□□□□□ -2.14
VPS38YLR360W FZO1P38297 855 aa1.71□□□□□ -2.14
VPS38YLR360W BFR1P38934 470 aaKnown RBP RIP-Chip data1.71□□□□□ -2.14not detected
VPS38YLR360W EDC3P39998 551 aaKnown RBP1.71□□□□□ -2.14
VPS38YLR360W BNA6P43619 295 aa1.71□□□□□ -2.14
VPS38YLR360W HAM1P47119 197 aaKnown RBP1.71□□□□□ -2.14
VPS38YLR360W YKR005CQ02203 525 aa1.71□□□□□ -2.14
VPS38YLR360W MED4Q12343 284 aa1.71□□□□□ -2.14
VPS38YLR360W EMP46Q12396 444 aa1.71□□□□□ -2.14
VPS38YLR360W IML1P47170 1584 aa1.71□□□□□ -2.14
VPS38YLR360W SIR4P11978 1358 aa1.7□□□□□ -2.14
VPS38YLR360W COX2P00410 251 aa1.7□□□□□ -2.14
VPS38YLR360W GPA2P10823 449 aa1.7□□□□□ -2.14
VPS38YLR360W OM45P16547 393 aa1.7□□□□□ -2.14
VPS38YLR360W MEI4P29467 408 aa1.7□□□□□ -2.14
VPS38YLR360W ASF2P32448 525 aaPredicted RBP1.7□□□□□ -2.14
VPS38YLR360W SSO1P32867 290 aa1.7□□□□□ -2.14
VPS38YLR360W JEN1P36035 616 aa1.7□□□□□ -2.14
VPS38YLR360W MRPL17P36528 281 aa1.7□□□□□ -2.14
VPS38YLR360W MRX3P38172 270 aa1.7□□□□□ -2.14
VPS38YLR360W PRS2P38620 318 aaKnown RBP1.7□□□□□ -2.14
VPS38YLR360W YER137CP40083 148 aaKnown RBP1.7□□□□□ -2.14
VPS38YLR360W ARC15P40518 154 aaRIP-Chip data1.7□□□□□ -2.14not detected
VPS38YLR360W AGE2P40529 298 aa1.7□□□□□ -2.14
VPS38YLR360W ALB1P47019 175 aaPredicted RBP1.7□□□□□ -2.14
VPS38YLR360W NUP84P52891 726 aa1.7□□□□□ -2.14
VPS38YLR360W ASI3P53983 676 aa1.7□□□□□ -2.14
VPS38YLR360W LAP3Q01532 483 aaKnown RBP RIP-Chip data1.7□□□□□ -2.14not detected
VPS38YLR360W PRM15Q03262 622 aa1.7□□□□□ -2.14
VPS38YLR360W YDR209CQ03480 137 aa1.7□□□□□ -2.14
VPS38YLR360W GOT1Q03554 138 aa1.7□□□□□ -2.14
VPS38YLR360W YDR124WQ04608 324 aa1.7□□□□□ -2.14
VPS38YLR360W ADH6Q04894 360 aaKnown RBP1.7□□□□□ -2.14
VPS38YLR360W COA4Q05809 96 aa1.7□□□□□ -2.14
VPS38YLR360W RIF1P29539 1916 aa1.7□□□□□ -2.14
VPS38YLR360W YRF1-2P40105 1681 aa1.7□□□□□ -2.14
VPS38YLR360W LYS2P07702 1392 aa1.7□□□□□ -2.14
VPS38YLR360W KRE5P22023 1365 aa1.7□□□□□ -2.14
VPS38YLR360W GSC2P40989 1895 aa1.69□□□□□ -2.14
VPS38YLR360W DAL82P21705 255 aa1.69□□□□□ -2.14
VPS38YLR360W DBF2P22204 572 aa1.69□□□□□ -2.14
VPS38YLR360W BUD23P25627 275 aaPredicted RBP1.69□□□□□ -2.14
VPS38YLR360W VMA6P32366 345 aaKnown RBP1.69□□□□□ -2.14
VPS38YLR360W COS8P38723 381 aa1.69□□□□□ -2.14
VPS38YLR360W VMA22P38784 181 aa1.69□□□□□ -2.14
VPS38YLR360W YIL001WP40560 513 aa1.69□□□□□ -2.14
VPS38YLR360W ILM1P47155 203 aa1.69□□□□□ -2.14
VPS38YLR360W CWC21Q03375 135 aaKnown RBP1.69□□□□□ -2.14
VPS38YLR360W RRP17Q04031 235 aaPredicted RBP1.69□□□□□ -2.14
VPS38YLR360W ATG17Q06410 417 aa1.69□□□□□ -2.14
VPS38YLR360W SNF8Q12483 233 aa1.69□□□□□ -2.14
VPS38YLR360W BOL1Q3E793 110 aa1.69□□□□□ -2.14
VPS38YLR360W YIL177CP40434 1758 aa1.69□□□□□ -2.14
VPS38YLR360W YJL225CP40889 1758 aa1.69□□□□□ -2.14
VPS38YLR360W FKS3Q04952 1785 aa1.69□□□□□ -2.14
VPS38YLR360W NUP192P47054 1683 aa1.69□□□□□ -2.14
VPS38YLR360W VTH1P40438 1549 aa1.69□□□□□ -2.14
VPS38YLR360W MDS3P53094 1487 aa1.69□□□□□ -2.14
VPS38YLR360W POL30P15873 258 aaKnown RBP1.68□□□□□ -2.14
VPS38YLR360W HSP30P25619 332 aa1.68□□□□□ -2.14
VPS38YLR360W VPS21P36017 210 aaKnown RBP1.68□□□□□ -2.14
VPS38YLR360W YPT52P36018 234 aaKnown RBP1.68□□□□□ -2.14
VPS38YLR360W RTC3P38804 111 aaPredicted RBP1.68□□□□□ -2.14
VPS38YLR360W YER189WP40104 122 aa1.68□□□□□ -2.14
VPS38YLR360W YJR079WP47126 109 aa1.68□□□□□ -2.14
Retrieved 100 of 5,963 RNA–protein pairs in 54.2 ms