RNA–Protein interactions for RNA: YLR207W

HRD3, Transcript of ER membrane protein that plays a central role in ERAD, yeastyeast

Gene HRD3, Length 2,502 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HRD3YLR207W YEL073CP39974 107 aa2.04□□□□□ -2.08
HRD3YLR207W YIP3P53633 176 aa2.04□□□□□ -2.08
HRD3YLR207W NHP10Q03435 203 aa2.04□□□□□ -2.08
HRD3YLR207W RPN8Q08723 338 aaKnown RBP2.04□□□□□ -2.08
HRD3YLR207W RSA1Q08932 381 aa2.04□□□□□ -2.08
HRD3YLR207W YOR114WQ12219 294 aa2.04□□□□□ -2.08
HRD3YLR207W UTP20P35194 2493 aaKnown RBP2.04□□□□□ -2.08
HRD3YLR207W YMR316C-AI2HB70 103 aa2.03□□□□□ -2.08
HRD3YLR207W COS2P0CX12 379 aa2.03□□□□□ -2.08
HRD3YLR207W COS3P0CX13 379 aa2.03□□□□□ -2.08
HRD3YLR207W MRS3P10566 314 aa2.03□□□□□ -2.08
HRD3YLR207W ZWF1P11412 505 aaKnown RBP2.03□□□□□ -2.08
HRD3YLR207W GCY1P14065 312 aaKnown RBP RIP-Chip data2.03□□□□□ -2.08not detected
HRD3YLR207W NMT1P14743 455 aa2.03□□□□□ -2.08
HRD3YLR207W MIR1P23641 311 aaKnown RBP2.03□□□□□ -2.08
HRD3YLR207W BUB2P26448 306 aaPredicted RBP2.03□□□□□ -2.08
HRD3YLR207W EHD3P28817 500 aa2.03□□□□□ -2.08
HRD3YLR207W LDS1P31379 325 aa2.03□□□□□ -2.08
HRD3YLR207W SHG1P38337 142 aa2.03□□□□□ -2.08
HRD3YLR207W YHR127WP38833 243 aaKnown RBP2.03□□□□□ -2.08
HRD3YLR207W BAT1P38891 393 aaKnown RBP2.03□□□□□ -2.08
HRD3YLR207W PET8P38921 284 aa2.03□□□□□ -2.08
HRD3YLR207W COS4P43542 379 aa2.03□□□□□ -2.08
HRD3YLR207W TRM9P49957 279 aa2.03□□□□□ -2.08
HRD3YLR207W SKI8Q02793 397 aaPredicted RBP2.03□□□□□ -2.08
HRD3YLR207W YDR476CQ03362 224 aa2.03□□□□□ -2.08
HRD3YLR207W YML018CQ03730 393 aa2.03□□□□□ -2.08
HRD3YLR207W YPR202WQ08993 238 aa2.03□□□□□ -2.08
HRD3YLR207W PPT2Q12036 173 aa2.03□□□□□ -2.08
HRD3YLR207W YAL064W-BO13512 126 aa2.03□□□□□ -2.08
HRD3YLR207W TIM9O74700 87 aa2.03□□□□□ -2.08
HRD3YLR207W TRP1P00912 224 aa2.03□□□□□ -2.08
HRD3YLR207W HHF1P02309 103 aaKnown RBP2.03□□□□□ -2.08
HRD3YLR207W PET494P07390 489 aaPredicted RBP2.03□□□□□ -2.08
HRD3YLR207W TRX3P25372 127 aa2.03□□□□□ -2.08
HRD3YLR207W FUN26P31381 517 aa2.03□□□□□ -2.08
HRD3YLR207W CDC13P32797 924 aaKnown RBP2.03□□□□□ -2.08
HRD3YLR207W TIP20P33891 701 aa2.03□□□□□ -2.08
HRD3YLR207W AME1P38313 324 aa2.03□□□□□ -2.08
HRD3YLR207W GIM4P40005 111 aaKnown RBP2.03□□□□□ -2.08
HRD3YLR207W HPM1P40481 377 aa2.03□□□□□ -2.08
HRD3YLR207W BIR1P47134 954 aa2.03□□□□□ -2.08
HRD3YLR207W YJR149WP47177 404 aa2.03□□□□□ -2.08
HRD3YLR207W TPN1P53099 579 aa2.03□□□□□ -2.08
HRD3YLR207W SHY1P53266 389 aa2.03□□□□□ -2.08
HRD3YLR207W SWS2P53937 143 aa2.03□□□□□ -2.08
HRD3YLR207W YNL010WP53981 241 aaKnown RBP2.03□□□□□ -2.08
HRD3YLR207W SUR7P54003 302 aa2.03□□□□□ -2.08
HRD3YLR207W YLR152CP54072 576 aa2.03□□□□□ -2.08
HRD3YLR207W GAS3Q03655 524 aa2.03□□□□□ -2.08
HRD3YLR207W YML096WQ04489 525 aa2.03□□□□□ -2.08
HRD3YLR207W ARR2Q06597 130 aa2.03□□□□□ -2.08
HRD3YLR207W BRX1Q08235 291 aaKnown RBP2.03□□□□□ -2.08
HRD3YLR207W MCT1Q12283 360 aa2.03□□□□□ -2.08
HRD3YLR207W PUT1P09368 476 aa2.02□□□□□ -2.09
HRD3YLR207W PMT2P31382 759 aa2.02□□□□□ -2.09
HRD3YLR207W ATS1P31386 333 aa2.02□□□□□ -2.09
HRD3YLR207W NTF2P33331 125 aaKnown RBP2.02□□□□□ -2.09
HRD3YLR207W MRPL39P36533 70 aa2.02□□□□□ -2.09
HRD3YLR207W SOL2P37262 315 aa2.02□□□□□ -2.09
HRD3YLR207W HEK2P38199 381 aaKnown RBP RIP-Chip data2.02□□□□□ -2.09not detected
HRD3YLR207W TRM7P38238 310 aaKnown RBP2.02□□□□□ -2.09
HRD3YLR207W GRE3P38715 327 aaKnown RBP RIP-Chip data2.02□□□□□ -2.09not detected
HRD3YLR207W YMR144WP40214 342 aaKnown RBP2.02□□□□□ -2.09
HRD3YLR207W PRM5P40476 318 aa2.02□□□□□ -2.09
HRD3YLR207W YFR057WP43625 151 aa2.02□□□□□ -2.09
HRD3YLR207W BRR6P53062 197 aa2.02□□□□□ -2.09
HRD3YLR207W MMS2P53152 137 aa2.02□□□□□ -2.09
HRD3YLR207W MSO1P53604 210 aaKnown RBP2.02□□□□□ -2.09
HRD3YLR207W CTF19Q02732 369 aa2.02□□□□□ -2.09
HRD3YLR207W YPL113CQ02961 396 aa2.02□□□□□ -2.09
HRD3YLR207W TVP15Q03860 143 aa2.02□□□□□ -2.09
HRD3YLR207W PEX12Q04370 399 aa2.02□□□□□ -2.09
HRD3YLR207W YHC1Q05900 231 aaKnown RBP2.02□□□□□ -2.09
HRD3YLR207W MFG1Q07684 458 aa2.02□□□□□ -2.09
HRD3YLR207W YPL225WQ08971 146 aaKnown RBP2.02□□□□□ -2.09
HRD3YLR207W VPS68Q12016 184 aa2.02□□□□□ -2.09
HRD3YLR207W RAS2P01120 322 aaKnown RBP2.02□□□□□ -2.09
HRD3YLR207W CYC3P06182 269 aa2.02□□□□□ -2.09
HRD3YLR207W STE7P06784 515 aa2.02□□□□□ -2.09
HRD3YLR207W BCY1P07278 416 aaKnown RBP2.02□□□□□ -2.09
HRD3YLR207W MSI1P13712 422 aa2.02□□□□□ -2.09
HRD3YLR207W CPR4P25334 318 aa2.02□□□□□ -2.09
HRD3YLR207W CAM1P29547 415 aaKnown RBP2.02□□□□□ -2.09
HRD3YLR207W ACP1P32463 125 aa2.02□□□□□ -2.09
HRD3YLR207W YPT52P36018 234 aaKnown RBP2.02□□□□□ -2.09
HRD3YLR207W FIG1P38224 298 aa2.02□□□□□ -2.09
HRD3YLR207W FES1P38260 290 aa2.02□□□□□ -2.09
HRD3YLR207W IRC18P47056 224 aa2.02□□□□□ -2.09
HRD3YLR207W TMA22P47089 198 aaPredicted RBP2.02□□□□□ -2.09
HRD3YLR207W CWC25P53854 179 aaKnown RBP2.02□□□□□ -2.09
HRD3YLR207W YPR147CQ06522 304 aaKnown RBP2.02□□□□□ -2.09
HRD3YLR207W HNT3Q08702 217 aa2.02□□□□□ -2.09
HRD3YLR207W ATP16Q12165 160 aa2.02□□□□□ -2.09
HRD3YLR207W RFM1Q12192 310 aa2.02□□□□□ -2.09
HRD3YLR207W WTM1Q12363 437 aaKnown RBP2.02□□□□□ -2.09
HRD3YLR207W MHT1Q12525 324 aa2.02□□□□□ -2.09
HRD3YLR207W TPI1P00942 248 aaKnown RBP2.01□□□□□ -2.09
HRD3YLR207W URA6P15700 204 aa2.01□□□□□ -2.09
HRD3YLR207W CCA1P21269 546 aa2.01□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 102.6 ms