RNA–Protein interactions for RNA: YLR136C

TIS11, Transcript of mRNA-binding protein expressed during iron starvation, yeastyeast

Gene TIS11, Length 858 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TIS11YLR136C GDH2P33327 1092 aaKnown RBP3.34□□□□□ -1.87
TIS11YLR136C PRX1P34227 261 aaKnown RBP3.34□□□□□ -1.87
TIS11YLR136C TAF14P35189 244 aa3.34□□□□□ -1.87
TIS11YLR136C YHB1P39676 399 aaKnown RBP3.34□□□□□ -1.87
TIS11YLR136C YJL028WP47062 111 aa3.34□□□□□ -1.87
TIS11YLR136C MCM22P47167 239 aa3.34□□□□□ -1.87
TIS11YLR136C TRM9P49957 279 aa3.34□□□□□ -1.87
TIS11YLR136C MGA1P53050 456 aa3.34□□□□□ -1.87
TIS11YLR136C ALG13P53178 202 aa3.34□□□□□ -1.87
TIS11YLR136C CUS2P53830 285 aaPredicted RBP3.34□□□□□ -1.87
TIS11YLR136C ATG38Q05789 226 aaKnown RBP3.34□□□□□ -1.87
TIS11YLR136C RRP40Q08285 240 aaKnown RBP3.34□□□□□ -1.87
TIS11YLR136C SYC1Q08553 188 aaPredicted RBP3.34□□□□□ -1.87
TIS11YLR136C UTP10P42945 1769 aaKnown RBP3.33□□□□□ -1.88
TIS11YLR136C MGM101P32787 269 aaKnown RBP3.33□□□□□ -1.88
TIS11YLR136C MRPL39P36533 70 aa3.33□□□□□ -1.88
TIS11YLR136C SPL2P38839 148 aa3.33□□□□□ -1.88
TIS11YLR136C NIF3P53081 288 aa3.33□□□□□ -1.88
TIS11YLR136C ECM11Q04110 302 aa3.33□□□□□ -1.88
TIS11YLR136C YDR222WQ04925 415 aa3.33□□□□□ -1.88
TIS11YLR136C GET4Q12125 312 aa3.33□□□□□ -1.88
TIS11YLR136C TPO4Q12256 659 aa3.33□□□□□ -1.88
TIS11YLR136C IES3Q12345 250 aa3.33□□□□□ -1.88
TIS11YLR136C DCN1Q12395 269 aa3.33□□□□□ -1.88
TIS11YLR136C YBL008W-AQ3E821 79 aa3.33□□□□□ -1.88
TIS11YLR136C YOL163WP0CF20 169 aa3.32□□□□□ -1.88
TIS11YLR136C TOM40P23644 387 aaKnown RBP3.32□□□□□ -1.88
TIS11YLR136C ECM13P38195 257 aa3.32□□□□□ -1.88
TIS11YLR136C YDR124WQ04608 324 aa3.32□□□□□ -1.88
TIS11YLR136C YOL019WQ08157 551 aa3.32□□□□□ -1.88
TIS11YLR136C YPR011CQ12251 326 aa3.32□□□□□ -1.88
TIS11YLR136C SMT3Q12306 101 aaKnown RBP3.32□□□□□ -1.88
TIS11YLR136C NOT5Q12514 560 aaPredicted RBP3.32□□□□□ -1.88
TIS11YLR136C YPL247CQ12523 523 aa3.32□□□□□ -1.88
TIS11YLR136C PPH21P23594 369 aa3.31□□□□□ -1.88
TIS11YLR136C SSO1P32867 290 aa3.31□□□□□ -1.88
TIS11YLR136C RFC4P40339 323 aaKnown RBP3.31□□□□□ -1.88
TIS11YLR136C NSA1P53136 463 aaPredicted RBP3.31□□□□□ -1.88
TIS11YLR136C GIM3P53900 129 aa3.31□□□□□ -1.88
TIS11YLR136C SNZ1Q03148 297 aa3.31□□□□□ -1.88
TIS11YLR136C GOT1Q03554 138 aa3.31□□□□□ -1.88
TIS11YLR136C MSA1Q08471 629 aa3.31□□□□□ -1.88
TIS11YLR136C EMP46Q12396 444 aa3.31□□□□□ -1.88
TIS11YLR136C YCL012CQ8J0M4 134 aa3.31□□□□□ -1.88
TIS11YLR136C YHR139C-AO13536 103 aa3.3□□□□□ -1.88
TIS11YLR136C SRY1P36007 326 aa3.3□□□□□ -1.88
TIS11YLR136C MDM34P53083 459 aa3.3□□□□□ -1.88
TIS11YLR136C YMR226CQ05016 267 aaKnown RBP3.3□□□□□ -1.88
TIS11YLR136C FCF1Q05498 189 aaPredicted RBP3.3□□□□□ -1.88
TIS11YLR136C YPL150WQ12152 901 aa3.3□□□□□ -1.88
TIS11YLR136C ISD11Q6Q560 94 aa3.3□□□□□ -1.88
TIS11YLR136C SWI1P09547 1314 aa3.29□□□□□ -1.88
TIS11YLR136C ZWF1P11412 505 aaKnown RBP3.29□□□□□ -1.88
TIS11YLR136C APA2P22108 325 aa3.29□□□□□ -1.88
TIS11YLR136C TEM1P38987 245 aa3.29□□□□□ -1.88
TIS11YLR136C YER189WP40104 122 aa3.29□□□□□ -1.88
TIS11YLR136C NUP57P48837 541 aa3.29□□□□□ -1.88
TIS11YLR136C RSM27P53305 110 aa3.29□□□□□ -1.88
TIS11YLR136C YEL009C-AA0A023PZF2 135 aa3.28□□□□□ -1.88
TIS11YLR136C RPL28P02406 149 aaKnown RBP3.28□□□□□ -1.88
TIS11YLR136C MATALPHA2P0CY08 210 aa3.28□□□□□ -1.88
TIS11YLR136C HMLALPHA2P0CY09 210 aa3.28□□□□□ -1.88
TIS11YLR136C URA6P15700 204 aa3.28□□□□□ -1.88
TIS11YLR136C YPK2P18961 677 aa3.28□□□□□ -1.88
TIS11YLR136C RFA3P26755 122 aaKnown RBP3.28□□□□□ -1.88
TIS11YLR136C ASF2P32448 525 aaPredicted RBP3.28□□□□□ -1.88
TIS11YLR136C SFC1P33303 322 aa3.28□□□□□ -1.88
TIS11YLR136C YMR144WP40214 342 aaKnown RBP3.28□□□□□ -1.88
TIS11YLR136C ADO1P47143 340 aaKnown RBP3.28□□□□□ -1.88
TIS11YLR136C MIG2P53035 382 aa3.28□□□□□ -1.88
TIS11YLR136C BRR6P53062 197 aa3.28□□□□□ -1.88
TIS11YLR136C ALG9P53868 555 aaKnown RBP3.28□□□□□ -1.88
TIS11YLR136C FYV6P53913 173 aa3.28□□□□□ -1.88
TIS11YLR136C YRA1Q12159 226 aaKnown RBP3.28□□□□□ -1.88
TIS11YLR136C CBF1P17106 351 aa3.27□□□□□ -1.89
TIS11YLR136C BMH1P29311 267 aaKnown RBP3.27□□□□□ -1.89
TIS11YLR136C AST1P35183 429 aa3.27□□□□□ -1.89
TIS11YLR136C PRY2P36110 329 aa3.27□□□□□ -1.89
TIS11YLR136C IKI1P38874 309 aa3.27□□□□□ -1.89
TIS11YLR136C SYF2P53277 215 aaPredicted RBP3.27□□□□□ -1.89
TIS11YLR136C YLR179CQ06252 201 aaKnown RBP3.27□□□□□ -1.89
TIS11YLR136C JLP1Q12358 412 aa3.27□□□□□ -1.89
TIS11YLR136C SAC3P46674 1301 aa3.26□□□□□ -1.89
TIS11YLR136C HTB1P02293 131 aaKnown RBP3.26□□□□□ -1.89
TIS11YLR136C HTB2P02294 131 aa3.26□□□□□ -1.89
TIS11YLR136C HIS3P06633 220 aa3.26□□□□□ -1.89
TIS11YLR136C MET2P08465 486 aa3.26□□□□□ -1.89
TIS11YLR136C TKL2P33315 681 aa3.26□□□□□ -1.89
TIS11YLR136C PEX17P40155 199 aa3.26□□□□□ -1.89
TIS11YLR136C NOP19P53317 196 aaPredicted RBP3.26□□□□□ -1.89
TIS11YLR136C YPR172WQ06608 200 aa3.26□□□□□ -1.89
TIS11YLR136C HEM25Q07534 307 aa3.26□□□□□ -1.89
TIS11YLR136C ABP140Q08641 628 aaKnown RBP3.26□□□□□ -1.89
TIS11YLR136C YDL012CQ12489 107 aa3.26□□□□□ -1.89
TIS11YLR136C TUS1Q06412 1307 aa3.25□□□□□ -1.89
TIS11YLR136C YLR462WO13556 202 aa3.25□□□□□ -1.89
TIS11YLR136C QCR7P00128 127 aa3.25□□□□□ -1.89
TIS11YLR136C IDH1P28834 360 aaKnown RBP RIP-Chip data3.25□□□□□ -1.89not detected
TIS11YLR136C SSH1P38353 490 aaKnown RBP3.25□□□□□ -1.89
TIS11YLR136C YEL075CP39972 122 aa3.25□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 57.8 ms