RNA–Protein interactions for RNA: YLR132C

USB1, Transcript of Putative phosphodiesterase specific for U6 snRNA 3' end modification, yeastyeast

Gene USB1, Length 873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
USB1YLR132C ADH6Q04894 360 aaKnown RBP2.82□□□□□ -1.96
USB1YLR132C DXO1Q06349 442 aa2.82□□□□□ -1.96
USB1YLR132C RPS23AP0CX29 145 aaKnown RBP2.81□□□□□ -1.96
USB1YLR132C RPS23BP0CX30 145 aa2.81□□□□□ -1.96
USB1YLR132C IME2P32581 645 aa2.81□□□□□ -1.96
USB1YLR132C YET1P35723 206 aa2.81□□□□□ -1.96
USB1YLR132C SLX9P53251 210 aaPredicted RBP2.81□□□□□ -1.96
USB1YLR132C MNT4P53745 580 aa2.81□□□□□ -1.96
USB1YLR132C CDC14Q00684 551 aa2.81□□□□□ -1.96
USB1YLR132C GTO3Q04806 366 aa2.81□□□□□ -1.96
USB1YLR132C YRA1Q12159 226 aaKnown RBP2.81□□□□□ -1.96
USB1YLR132C YOL107WQ12239 342 aa2.81□□□□□ -1.96
USB1YLR132C SME1Q12330 94 aaPredicted RBP2.81□□□□□ -1.96
USB1YLR132C MEI4P29467 408 aa2.8□□□□□ -1.96
USB1YLR132C RPL10P41805 221 aaKnown RBP2.8□□□□□ -1.96
USB1YLR132C YJL118WP47022 219 aa2.8□□□□□ -1.96
USB1YLR132C MIG2P53035 382 aa2.8□□□□□ -1.96
USB1YLR132C ALG9P53868 555 aaKnown RBP2.8□□□□□ -1.96
USB1YLR132C PRR2Q12310 699 aa2.8□□□□□ -1.96
USB1YLR132C FAS1P07149 2051 aaKnown RBP2.8□□□□□ -1.96
USB1YLR132C COX2P00410 251 aa2.79□□□□□ -1.96
USB1YLR132C RSR1P13856 272 aa2.79□□□□□ -1.96
USB1YLR132C YCR102CP25608 368 aa2.79□□□□□ -1.96
USB1YLR132C PRP18P33411 251 aaPredicted RBP2.79□□□□□ -1.96
USB1YLR132C YBL081WP38180 368 aaKnown RBP2.79□□□□□ -1.96
USB1YLR132C SMC2P38989 1170 aaKnown RBP2.79□□□□□ -1.96
USB1YLR132C GIM4P40005 111 aaKnown RBP2.79□□□□□ -1.96
USB1YLR132C HYR1P40581 163 aaKnown RBP2.79□□□□□ -1.96
USB1YLR132C SDC1Q03323 175 aa2.79□□□□□ -1.96
USB1YLR132C YDR209CQ03480 137 aa2.79□□□□□ -1.96
USB1YLR132C OST6Q03723 332 aa2.79□□□□□ -1.96
USB1YLR132C COX20Q04935 205 aa2.79□□□□□ -1.96
USB1YLR132C PEX10Q05568 337 aa2.79□□□□□ -1.96
USB1YLR132C ARV1Q06541 321 aa2.79□□□□□ -1.96
USB1YLR132C AKR2Q12013 749 aa2.79□□□□□ -1.96
USB1YLR132C YOR342CQ12182 319 aa2.79□□□□□ -1.96
USB1YLR132C ATG5Q12380 294 aa2.79□□□□□ -1.96
USB1YLR132C ISD11Q6Q560 94 aa2.79□□□□□ -1.96
USB1YLR132C SFC1P33303 322 aa2.78□□□□□ -1.96
USB1YLR132C CAB3P36076 571 aa2.78□□□□□ -1.96
USB1YLR132C LDB7P38210 180 aa2.78□□□□□ -1.96
USB1YLR132C SUR2P38992 349 aa2.78□□□□□ -1.96
USB1YLR132C SCC4P40090 624 aa2.78□□□□□ -1.96
USB1YLR132C JHD2P47156 728 aaPredicted RBP2.78□□□□□ -1.96
USB1YLR132C FMP41P53889 259 aaKnown RBP2.78□□□□□ -1.96
USB1YLR132C YNL095CP53932 642 aa2.78□□□□□ -1.96
USB1YLR132C TRM12Q04235 462 aa2.78□□□□□ -1.96
USB1YLR132C TIM22Q12328 207 aa2.78□□□□□ -1.96
USB1YLR132C GTT2Q12390 233 aa2.78□□□□□ -1.96
USB1YLR132C LSM4P40070 187 aaKnown RBP2.77□□□□□ -1.97
USB1YLR132C YAR1P46683 200 aa2.77□□□□□ -1.97
USB1YLR132C YGL088WP53151 121 aa2.77□□□□□ -1.97
USB1YLR132C TPO4Q12256 659 aa2.77□□□□□ -1.97
USB1YLR132C MET2P08465 486 aa2.76□□□□□ -1.97
USB1YLR132C MGM101P32787 269 aaKnown RBP2.76□□□□□ -1.97
USB1YLR132C HEK2P38199 381 aaKnown RBP RIP-Chip data2.76□□□□□ -1.97 RIP-Chip
USB1YLR132C YHR045WP38775 560 aa2.76□□□□□ -1.97
USB1YLR132C SPO73P40031 143 aa2.76□□□□□ -1.97
USB1YLR132C YJL144WP47009 104 aa2.76□□□□□ -1.97
USB1YLR132C MAL13P53338 473 aa2.76□□□□□ -1.97
USB1YLR132C MED4Q12343 284 aa2.76□□□□□ -1.97
USB1YLR132C DYN1P36022 4092 aa2.76□□□□□ -1.97
USB1YLR132C ZWF1P11412 505 aaKnown RBP2.75□□□□□ -1.97
USB1YLR132C PRS2P38620 318 aaKnown RBP2.75□□□□□ -1.97
USB1YLR132C ARN2P38724 620 aa2.75□□□□□ -1.97
USB1YLR132C CUP9P41817 306 aa2.75□□□□□ -1.97
USB1YLR132C NIF3P53081 288 aa2.75□□□□□ -1.97
USB1YLR132C RRN5Q02983 363 aa2.75□□□□□ -1.97
USB1YLR132C CTS2Q06350 511 aa2.75□□□□□ -1.97
USB1YLR132C RRT8Q08219 342 aa2.75□□□□□ -1.97
USB1YLR132C YPL119C-AQ3E751 87 aa2.75□□□□□ -1.97
USB1YLR132C RAD10P06838 210 aa2.74□□□□□ -1.97
USB1YLR132C RPS27AP35997 82 aaKnown RBP2.74□□□□□ -1.97
USB1YLR132C YPT52P36018 234 aaKnown RBP2.74□□□□□ -1.97
USB1YLR132C MAK5P38112 773 aaPredicted RBP2.74□□□□□ -1.97
USB1YLR132C RPS27BP38711 82 aa2.74□□□□□ -1.97
USB1YLR132C MRPL50P53724 139 aa2.74□□□□□ -1.97
USB1YLR132C AAH1P53909 347 aa2.74□□□□□ -1.97
USB1YLR132C YDR278CQ05612 105 aa2.74□□□□□ -1.97
USB1YLR132C YLR173WQ06247 608 aa2.74□□□□□ -1.97
USB1YLR132C YOL019WQ08157 551 aa2.74□□□□□ -1.97
USB1YLR132C SLD7Q08457 257 aa2.74□□□□□ -1.97
USB1YLR132C SLH1P53327 1967 aaKnown RBP2.74□□□□□ -1.97
USB1YLR132C CDC39P25655 2108 aaKnown RBP2.73□□□□□ -1.97
USB1YLR132C QRI5P32344 111 aa2.73□□□□□ -1.97
USB1YLR132C YKR032WP36127 104 aa2.73□□□□□ -1.97
USB1YLR132C PRS4P38063 326 aaPredicted RBP2.73□□□□□ -1.97
USB1YLR132C YHR127WP38833 243 aaKnown RBP2.73□□□□□ -1.97
USB1YLR132C TEM1P38987 245 aa2.73□□□□□ -1.97
USB1YLR132C OST3P48439 350 aa2.73□□□□□ -1.97
USB1YLR132C PET117Q02771 107 aa2.73□□□□□ -1.97
USB1YLR132C YPL039WQ03080 316 aa2.73□□□□□ -1.97
USB1YLR132C LOA1Q06508 300 aa2.73□□□□□ -1.97
USB1YLR132C RFM1Q12192 310 aa2.73□□□□□ -1.97
USB1YLR132C SMT3Q12306 101 aaKnown RBP2.73□□□□□ -1.97
USB1YLR132C PST1Q12355 444 aa2.73□□□□□ -1.97
USB1YLR132C RNA15P25299 296 aaPredicted RBP2.72□□□□□ -1.97
USB1YLR132C YCR099CP25657 155 aa2.72□□□□□ -1.97
USB1YLR132C MIG1P27705 504 aa2.72□□□□□ -1.97
USB1YLR132C YHL049CP38722 271 aa2.72□□□□□ -1.97
Retrieved 100 of 5,963 RNA–protein pairs in 88.1 ms