RNA–Protein interactions for RNA: YHR172W

SPC97, Transcript of Component of the microtubule-nucleating Tub4p (gamma-tubulin) complex, yeast

Gene SPC97, Length 2,472 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPC97	YHR172W	ERP1	Q05359	219 aa	Known RBP	4.56	□□□□□ -1.68
SPC97	YHR172W	ATP16	Q12165	160 aa		4.56	□□□□□ -1.68
SPC97	YHR172W	CYC7	P00045	113 aa		4.56	□□□□□ -1.68
SPC97	YHR172W	MSI1	P13712	422 aa		4.56	□□□□□ -1.68
SPC97	YHR172W	PHO13	P19881	312 aa		4.56	□□□□□ -1.68
SPC97	YHR172W	MRPL20	P22354	195 aa	Predicted RBP	4.56	□□□□□ -1.68
SPC97	YHR172W	HYM1	P32464	399 aa		4.56	□□□□□ -1.68
SPC97	YHR172W	AYR1	P40471	297 aa		4.56	□□□□□ -1.68
SPC97	YHR172W	BUD13	P46947	266 aa	Predicted RBP	4.56	□□□□□ -1.68
SPC97	YHR172W	YJL043W	P47053	257 aa		4.56	□□□□□ -1.68
SPC97	YHR172W	MRH4	P53166	561 aa		4.56	□□□□□ -1.68
SPC97	YHR172W	FAR10	Q06001	478 aa		4.56	□□□□□ -1.68
SPC97	YHR172W	HEM4	P06174	275 aa		4.55	□□□□□ -1.68
SPC97	YHR172W	CBP6	P07253	162 aa	Predicted RBP	4.55	□□□□□ -1.68
SPC97	YHR172W	YKL102C	P34249	101 aa		4.55	□□□□□ -1.68
SPC97	YHR172W	SOL2	P37262	315 aa		4.55	□□□□□ -1.68
SPC97	YHR172W	NAT2	P37293	288 aa		4.55	□□□□□ -1.68
SPC97	YHR172W	SCO2	P38072	301 aa		4.55	□□□□□ -1.68
SPC97	YHR172W	LEU5	P38702	357 aa		4.55	□□□□□ -1.68
SPC97	YHR172W	YHL049C	P38722	271 aa		4.55	□□□□□ -1.68
SPC97	YHR172W	MTC6	P38849	526 aa		4.55	□□□□□ -1.68
SPC97	YHR172W	ARO8	P53090	500 aa	Known RBP	4.55	□□□□□ -1.68
SPC97	YHR172W	TIM13	P53299	105 aa		4.55	□□□□□ -1.68
SPC97	YHR172W	LSM3	P57743	89 aa	Known RBP	4.55	□□□□□ -1.68
SPC97	YHR172W	YMR181C	Q03231	154 aa		4.55	□□□□□ -1.68
SPC97	YHR172W	YOL160W	Q08321	113 aa		4.55	□□□□□ -1.68
SPC97	YHR172W	YOR186W	Q08560	144 aa		4.55	□□□□□ -1.68
SPC97	YHR172W	DGA1	Q08650	418 aa		4.55	□□□□□ -1.68
SPC97	YHR172W	SIR2	P06700	562 aa		4.55	□□□□□ -1.68
SPC97	YHR172W	NSP1	P14907	823 aa	Known RBP	4.55	□□□□□ -1.68
SPC97	YHR172W	ATG15	P25641	520 aa		4.55	□□□□□ -1.68
SPC97	YHR172W	AGA1	P32323	725 aa		4.55	□□□□□ -1.68
SPC97	YHR172W	YBR062C	P38239	180 aa		4.55	□□□□□ -1.68
SPC97	YHR172W	YBR220C	P38318	560 aa		4.55	□□□□□ -1.68
SPC97	YHR172W	HMF1	P40037	129 aa	Known RBP	4.55	□□□□□ -1.68
SPC97	YHR172W	YDR391C	Q04170	232 aa		4.55	□□□□□ -1.68
SPC97	YHR172W	TMA10	Q06177	86 aa		4.55	□□□□□ -1.68
SPC97	YHR172W	YMR316C-A	I2HB70	103 aa		4.54	□□□□□ -1.68
SPC97	YHR172W	GLC7	P32598	312 aa	Known RBP	4.54	□□□□□ -1.68
SPC97	YHR172W	CHL4	P38907	458 aa		4.54	□□□□□ -1.68
SPC97	YHR172W	RDL1	Q12305	139 aa	Known RBP	4.54	□□□□□ -1.68
SPC97	YHR172W	YLR099W-A	Q3E798	87 aa		4.54	□□□□□ -1.68
SPC97	YHR172W	MHP1	P43638	1398 aa		4.54	□□□□□ -1.68
SPC97	YHR172W	AQY1	P0CD91	305 aa		4.54	□□□□□ -1.68
SPC97	YHR172W	ILV6	P25605	309 aa	Known RBP	4.54	□□□□□ -1.68
SPC97	YHR172W	CTS1	P29029	562 aa		4.54	□□□□□ -1.68
SPC97	YHR172W	COX14	P39103	70 aa		4.54	□□□□□ -1.68
SPC97	YHR172W	SER2	P42941	309 aa		4.54	□□□□□ -1.68
SPC97	YHR172W	OST2	P46964	130 aa		4.54	□□□□□ -1.68
SPC97	YHR172W	SLM2	P53955	656 aa		4.54	□□□□□ -1.68
SPC97	YHR172W	SYC1	Q08553	188 aa	Predicted RBP	4.54	□□□□□ -1.68
SPC97	YHR172W	BUD4	P47136	1447 aa		4.54	□□□□□ -1.68
SPC97	YHR172W	TRM732	Q03496	1420 aa		4.54	□□□□□ -1.68
SPC97	YHR172W	PIS1	P06197	220 aa	Known RBP	4.53	□□□□□ -1.68
SPC97	YHR172W	POP8	P38208	133 aa		4.53	□□□□□ -1.68
SPC97	YHR172W	MBA1	P38300	278 aa		4.53	□□□□□ -1.68
SPC97	YHR172W	MED6	P38782	295 aa		4.53	□□□□□ -1.68
SPC97	YHR172W	HEM14	P40012	539 aa		4.53	□□□□□ -1.68
SPC97	YHR172W	RPS12	P48589	143 aa	Known RBP	4.53	□□□□□ -1.68
SPC97	YHR172W	YGR018C	P53211	109 aa		4.53	□□□□□ -1.68
SPC97	YHR172W	YPL245W	Q12179	454 aa	Known RBP	4.53	□□□□□ -1.68
SPC97	YHR172W	STP22	P25604	385 aa		4.53	□□□□□ -1.68
SPC97	YHR172W	RRT5	P43607	289 aa		4.53	□□□□□ -1.68
SPC97	YHR172W	YGL082W	P53155	381 aa		4.53	□□□□□ -1.68
SPC97	YHR172W	HHO1	P53551	258 aa		4.53	□□□□□ -1.68
SPC97	YHR172W	PAL1	Q05518	499 aa	Known RBP	4.53	□□□□□ -1.68
SPC97	YHR172W	YTH1	Q06102	208 aa	Predicted RBP	4.53	□□□□□ -1.68
SPC97	YHR172W	ATG39	Q06159	398 aa		4.53	□□□□□ -1.68
SPC97	YHR172W	SNX3	Q08826	162 aa	Known RBP	4.53	□□□□□ -1.68
SPC97	YHR172W	PHO85	P17157	305 aa		4.52	□□□□□ -1.69
SPC97	YHR172W	PTM1	P32857	523 aa		4.52	□□□□□ -1.69
SPC97	YHR172W	GPX1	P36014	167 aa		4.52	□□□□□ -1.69
SPC97	YHR172W	XPT1	P47165	209 aa		4.52	□□□□□ -1.69
SPC97	YHR172W	TMA23	Q03525	211 aa		4.52	□□□□□ -1.69
SPC97	YHR172W	HRI1	Q05905	244 aa	Known RBP	4.52	□□□□□ -1.69
SPC97	YHR172W	MSA1	Q08471	629 aa		4.52	□□□□□ -1.69
SPC97	YHR172W	MPD1	Q12404	318 aa	Known RBP	4.52	□□□□□ -1.69
SPC97	YHR172W	HTZ1	Q12692	134 aa	Known RBP	4.52	□□□□□ -1.69
SPC97	YHR172W	YHR214C-E	Q8TGK0	99 aa		4.52	□□□□□ -1.69
SPC97	YHR172W	PDR18	P53756	1333 aa		4.52	□□□□□ -1.69
SPC97	YHR172W	PSK1	P31374	1356 aa		4.52	□□□□□ -1.69
SPC97	YHR172W	YPL073C	P40323	161 aa		4.52	□□□□□ -1.69
SPC97	YHR172W	MDM34	P53083	459 aa		4.52	□□□□□ -1.69
SPC97	YHR172W	YNL234W	P53857	426 aa		4.52	□□□□□ -1.69
SPC97	YHR172W	YDR366C	P87287	132 aa		4.52	□□□□□ -1.69
SPC97	YHR172W	GOT1	Q03554	138 aa		4.52	□□□□□ -1.69
SPC97	YHR172W	PFA4	Q12006	378 aa		4.52	□□□□□ -1.69
SPC97	YHR172W	RPS13	P05756	151 aa	Known RBP	4.51	□□□□□ -1.69
SPC97	YHR172W	STE7	P06784	515 aa		4.51	□□□□□ -1.69
SPC97	YHR172W	SPO13	P23624	291 aa		4.51	□□□□□ -1.69
SPC97	YHR172W	MIR1	P23641	311 aa	Known RBP	4.51	□□□□□ -1.69
SPC97	YHR172W	OST1	P41543	476 aa	Known RBP	4.51	□□□□□ -1.69
SPC97	YHR172W	ORM1	P53224	222 aa		4.51	□□□□□ -1.69
SPC97	YHR172W	TPC1	P53257	314 aa		4.51	□□□□□ -1.69
SPC97	YHR172W	IES4	Q08561	116 aa		4.51	□□□□□ -1.69
SPC97	YHR172W	YOR376W	Q08900	122 aa		4.51	□□□□□ -1.69
SPC97	YHR172W	YDR215C	Q12240	137 aa		4.51	□□□□□ -1.69
SPC97	YHR172W	PHO2	P07269	559 aa		4.51	□□□□□ -1.69
SPC97	YHR172W	PCL1	P24867	279 aa		4.51	□□□□□ -1.69
SPC97	YHR172W	YPT53	P36019	220 aa		4.51	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 60.7 ms