RNA–Protein interactions for RNA: YGL212W

VAM7, Transcript of Vacuolar SNARE protein, yeast

Gene VAM7, Length 951 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VAM7	YGL212W	ARF2	P19146	181 aa	Known RBP	4.85	□□□□□ -1.63
VAM7	YGL212W	GAS1	P22146	559 aa	Known RBP	4.85	□□□□□ -1.63
VAM7	YGL212W	PPH21	P23594	369 aa		4.85	□□□□□ -1.63
VAM7	YGL212W	SAT4	P25333	603 aa	Known RBP	4.85	□□□□□ -1.63
VAM7	YGL212W	POF1	P25576	258 aa		4.85	□□□□□ -1.63
VAM7	YGL212W	QRI5	P32344	111 aa		4.85	□□□□□ -1.63
VAM7	YGL212W	SEC17	P32602	292 aa		4.85	□□□□□ -1.63
VAM7	YGL212W	YSC84	P32793	468 aa		4.85	□□□□□ -1.63
VAM7	YGL212W	YOR062C	P36025	268 aa		4.85	□□□□□ -1.63
VAM7	YGL212W	FRE2	P36033	711 aa		4.85	□□□□□ -1.63
VAM7	YGL212W	MRPL3	P36516	390 aa		4.85	□□□□□ -1.63
VAM7	YGL212W	NAT2	P37293	288 aa		4.85	□□□□□ -1.63
VAM7	YGL212W	YBR241C	P38142	488 aa		4.85	□□□□□ -1.63
VAM7	YGL212W	ECM14	P38836	430 aa		4.85	□□□□□ -1.63
VAM7	YGL212W	CTF8	P38877	133 aa		4.85	□□□□□ -1.63
VAM7	YGL212W	CEM1	P39525	442 aa		4.85	□□□□□ -1.63
VAM7	YGL212W	YAL037W	P39728	267 aa		4.85	□□□□□ -1.63
VAM7	YGL212W	GLR1	P41921	483 aa	Known RBP	4.85	□□□□□ -1.63
VAM7	YGL212W	NSE4	P43124	402 aa		4.85	□□□□□ -1.63
VAM7	YGL212W	MSY1	P48527	492 aa		4.85	□□□□□ -1.63
VAM7	YGL212W	COQ5	P49017	307 aa		4.85	□□□□□ -1.63
VAM7	YGL212W	TIM13	P53299	105 aa		4.85	□□□□□ -1.63
VAM7	YGL212W	CPR8	P53728	308 aa		4.85	□□□□□ -1.63
VAM7	YGL212W	MRPL22	P53881	309 aa		4.85	□□□□□ -1.63
VAM7	YGL212W	SLM2	P53955	656 aa		4.85	□□□□□ -1.63
VAM7	YGL212W	UTP15	Q04305	513 aa	Known RBP	4.85	□□□□□ -1.63
VAM7	YGL212W	SCP1	Q08873	200 aa		4.85	□□□□□ -1.63
VAM7	YGL212W	ALG6	Q12001	544 aa	Known RBP	4.85	□□□□□ -1.63
VAM7	YGL212W	DGK1	Q12382	290 aa		4.85	□□□□□ -1.63
VAM7	YGL212W	TY1A-DR3	Q12441	440 aa		4.85	□□□□□ -1.63
VAM7	YGL212W	YPR015C	Q12531	247 aa		4.85	□□□□□ -1.63
VAM7	YGL212W	YIL046W-A	Q3E7Z4	54 aa		4.85	□□□□□ -1.63
VAM7	YGL212W	YER175W-A	Q8TGU4	54 aa		4.85	□□□□□ -1.63
VAM7	YGL212W	HFA1	P32874	2273 aa		4.84	□□□□□ -1.63
VAM7	YGL212W	ALG7	P07286	448 aa		4.84	□□□□□ -1.63
VAM7	YGL212W	PHO85	P17157	305 aa		4.84	□□□□□ -1.63
VAM7	YGL212W	RPS2	P25443	254 aa	Known RBP	4.84	□□□□□ -1.63
VAM7	YGL212W	PEX4	P29340	183 aa		4.84	□□□□□ -1.63
VAM7	YGL212W	SAC1	P32368	623 aa	Known RBP	4.84	□□□□□ -1.63
VAM7	YGL212W	ZRT1	P32804	376 aa		4.84	□□□□□ -1.63
VAM7	YGL212W	SNC2	P33328	115 aa		4.84	□□□□□ -1.63
VAM7	YGL212W	RCN1	P36054	211 aa		4.84	□□□□□ -1.63
VAM7	YGL212W	SRX1	P36077	127 aa		4.84	□□□□□ -1.63
VAM7	YGL212W	RFC5	P38251	354 aa		4.84	□□□□□ -1.63
VAM7	YGL212W	YPC1	P38298	316 aa		4.84	□□□□□ -1.63
VAM7	YGL212W	DBP8	P38719	431 aa		4.84	□□□□□ -1.63
VAM7	YGL212W	YHR035W	P38769	630 aa		4.84	□□□□□ -1.63
VAM7	YGL212W	LYS1	P38998	373 aa	RIP-Chip data	4.84	□□□□□ -1.63	not detected
VAM7	YGL212W	PEX22	P39718	180 aa		4.84	□□□□□ -1.63
VAM7	YGL212W	ISC1	P40015	477 aa	Known RBP	4.84	□□□□□ -1.63
VAM7	YGL212W	RPA43	P46669	326 aa		4.84	□□□□□ -1.63
VAM7	YGL212W	TRM9	P49957	279 aa		4.84	□□□□□ -1.63
VAM7	YGL212W	COS10	P52924	374 aa		4.84	□□□□□ -1.63
VAM7	YGL212W	DAD3	P69850	94 aa		4.84	□□□□□ -1.63
VAM7	YGL212W	YCL001W-A	P87012	153 aa		4.84	□□□□□ -1.63
VAM7	YGL212W	CDC14	Q00684	551 aa		4.84	□□□□□ -1.63
VAM7	YGL212W	SDH1	Q00711	640 aa		4.84	□□□□□ -1.63
VAM7	YGL212W	YPL014W	Q02606	381 aa		4.84	□□□□□ -1.63
VAM7	YGL212W	COF1	Q03048	143 aa	Known RBP	4.84	□□□□□ -1.63
VAM7	YGL212W	YMR166C	Q03829	368 aa		4.84	□□□□□ -1.63
VAM7	YGL212W	YET2	Q04210	160 aa		4.84	□□□□□ -1.63
VAM7	YGL212W	TY1A-MR1	Q04215	440 aa		4.84	□□□□□ -1.63
VAM7	YGL212W	TAF9	Q05027	157 aa		4.84	□□□□□ -1.63
VAM7	YGL212W	HPF1	Q05164	967 aa		4.84	□□□□□ -1.63
VAM7	YGL212W	LIP2	Q06005	328 aa		4.84	□□□□□ -1.63
VAM7	YGL212W	YLR446W	Q06204	433 aa		4.84	□□□□□ -1.63
VAM7	YGL212W	SYC1	Q08553	188 aa	Predicted RBP	4.84	□□□□□ -1.63
VAM7	YGL212W	IRC13	Q08630	104 aa		4.84	□□□□□ -1.63
VAM7	YGL212W	IGO2	Q9P305	131 aa		4.84	□□□□□ -1.63
VAM7	YGL212W	RAD10	P06838	210 aa		4.83	□□□□□ -1.64
VAM7	YGL212W	MRS1	P07266	363 aa		4.83	□□□□□ -1.64
VAM7	YGL212W	RPL31A	P0C2H8	113 aa	Known RBP	4.83	□□□□□ -1.64
VAM7	YGL212W	UBI4	P0CG63	381 aa	Known RBP	4.83	□□□□□ -1.64
VAM7	YGL212W	MAG1	P22134	296 aa	Known RBP	4.83	□□□□□ -1.64
VAM7	YGL212W	BUB3	P26449	341 aa		4.83	□□□□□ -1.64
VAM7	YGL212W	NNK1	P36003	928 aa		4.83	□□□□□ -1.64
VAM7	YGL212W	BAT1	P38891	393 aa	Known RBP	4.83	□□□□□ -1.64
VAM7	YGL212W	SAS2	P40963	338 aa		4.83	□□□□□ -1.64
VAM7	YGL212W	YFL064C	P43540	174 aa		4.83	□□□□□ -1.64
VAM7	YGL212W	JJJ3	P47138	172 aa		4.83	□□□□□ -1.64
VAM7	YGL212W	MCM22	P47167	239 aa		4.83	□□□□□ -1.64
VAM7	YGL212W	AVT4	P50944	713 aa		4.83	□□□□□ -1.64
VAM7	YGL212W	YIP1	P53039	248 aa		4.83	□□□□□ -1.64
VAM7	YGL212W	DOC1	P53068	250 aa		4.83	□□□□□ -1.64
VAM7	YGL212W	ERG26	P53199	349 aa	Known RBP	4.83	□□□□□ -1.64
VAM7	YGL212W	FHN1	P53279	174 aa		4.83	□□□□□ -1.64
VAM7	YGL212W	HHO1	P53551	258 aa		4.83	□□□□□ -1.64
VAM7	YGL212W	ERP1	Q05359	219 aa	Known RBP	4.83	□□□□□ -1.64
VAM7	YGL212W	PFA4	Q12006	378 aa		4.83	□□□□□ -1.64
VAM7	YGL212W	YPR063C	Q12160	140 aa		4.83	□□□□□ -1.64
VAM7	YGL212W	YLR118C	Q12354	227 aa		4.83	□□□□□ -1.64
VAM7	YGL212W	PRM4	Q12498	284 aa		4.83	□□□□□ -1.64
VAM7	YGL212W	RPN13	O13563	156 aa		4.82	□□□□□ -1.64
VAM7	YGL212W	RPS19A	P07280	144 aa	Known RBP	4.82	□□□□□ -1.64
VAM7	YGL212W	RPS19B	P07281	144 aa	Predicted RBP	4.82	□□□□□ -1.64
VAM7	YGL212W	SPO11	P23179	398 aa		4.82	□□□□□ -1.64
VAM7	YGL212W	MSN2	P33748	704 aa		4.82	□□□□□ -1.64
VAM7	YGL212W	YHR112C	P38716	378 aa		4.82	□□□□□ -1.64
VAM7	YGL212W	DOG1	P38774	246 aa		4.82	□□□□□ -1.64
VAM7	YGL212W	YEA6	P39953	335 aa		4.82	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 50.8 ms