RNA–Protein interactions for RNA: YGL025C

PGD1, Transcript of Subunit of the RNA polymerase II mediator complex, yeastyeast

Gene PGD1, Length 1,194 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PGD1YGL025C MATALPHA1P0CY06 175 aa1.58□□□□□ -2.16
PGD1YGL025C HMLALPHA1P0CY07 175 aa1.58□□□□□ -2.16
PGD1YGL025C MRPS28P21771 286 aa1.58□□□□□ -2.16
PGD1YGL025C MRX3P38172 270 aa1.58□□□□□ -2.16
PGD1YGL025C POP7P38291 140 aa1.58□□□□□ -2.16
PGD1YGL025C DOG1P38774 246 aa1.58□□□□□ -2.16
PGD1YGL025C CTR2P38865 189 aa1.58□□□□□ -2.16
PGD1YGL025C RIO2P40160 425 aaKnown RBP1.58□□□□□ -2.16
PGD1YGL025C FMC1P40491 155 aa1.58□□□□□ -2.16
PGD1YGL025C YRB2P40517 327 aa1.58□□□□□ -2.16
PGD1YGL025C RPL10P41805 221 aaKnown RBP1.58□□□□□ -2.16
PGD1YGL025C RCF2P53721 224 aa1.58□□□□□ -2.16
PGD1YGL025C YNL134CP53912 376 aaKnown RBP1.58□□□□□ -2.16
PGD1YGL025C YPR147CQ06522 304 aaKnown RBP1.58□□□□□ -2.16
PGD1YGL025C YPL225WQ08971 146 aaKnown RBP1.58□□□□□ -2.16
PGD1YGL025C MSH5Q12175 901 aa1.58□□□□□ -2.16
PGD1YGL025C TRM732Q03496 1420 aa1.57□□□□□ -2.16
PGD1YGL025C POL30P15873 258 aaKnown RBP1.57□□□□□ -2.16
PGD1YGL025C HSP30P25619 332 aa1.57□□□□□ -2.16
PGD1YGL025C GSP1P32835 219 aaKnown RBP1.57□□□□□ -2.16
PGD1YGL025C GSP2P32836 220 aaKnown RBP1.57□□□□□ -2.16
PGD1YGL025C SSO1P32867 290 aa1.57□□□□□ -2.16
PGD1YGL025C PRS2P38620 318 aaKnown RBP1.57□□□□□ -2.16
PGD1YGL025C TCD1P38756 429 aa1.57□□□□□ -2.16
PGD1YGL025C VMA22P38784 181 aa1.57□□□□□ -2.16
PGD1YGL025C YER189WP40104 122 aa1.57□□□□□ -2.16
PGD1YGL025C ARC15P40518 154 aaRIP-Chip data1.57□□□□□ -2.16not detected
PGD1YGL025C YAR1P46683 200 aa1.57□□□□□ -2.16
PGD1YGL025C HAM1P47119 197 aaKnown RBP1.57□□□□□ -2.16
PGD1YGL025C YJR111CP47148 283 aaKnown RBP1.57□□□□□ -2.16
PGD1YGL025C FYV6P53913 173 aa1.57□□□□□ -2.16
PGD1YGL025C PET117Q02771 107 aa1.57□□□□□ -2.16
PGD1YGL025C YDR209CQ03480 137 aa1.57□□□□□ -2.16
PGD1YGL025C YDR248CQ03786 193 aa1.57□□□□□ -2.16
PGD1YGL025C RFU1Q08003 200 aa1.57□□□□□ -2.16
PGD1YGL025C ADE6P38972 1358 aaKnown RBP1.57□□□□□ -2.16
PGD1YGL025C REV3P14284 1504 aa1.56□□□□□ -2.16
PGD1YGL025C HSL1P34244 1518 aa1.56□□□□□ -2.16
PGD1YGL025C YLR462WO13556 202 aa1.56□□□□□ -2.16
PGD1YGL025C TCP1P12612 559 aaKnown RBP1.56□□□□□ -2.16
PGD1YGL025C NMT1P14743 455 aa1.56□□□□□ -2.16
PGD1YGL025C SCL1P21243 252 aaKnown RBP1.56□□□□□ -2.16
PGD1YGL025C YCR016WP25617 290 aaKnown RBP1.56□□□□□ -2.16
PGD1YGL025C SUI1P32911 108 aaKnown RBP1.56□□□□□ -2.16
PGD1YGL025C CAF4P36130 643 aa1.56□□□□□ -2.16
PGD1YGL025C MSA2P36157 363 aa1.56□□□□□ -2.16
PGD1YGL025C FZO1P38297 855 aa1.56□□□□□ -2.16
PGD1YGL025C YHR125WP38831 101 aa1.56□□□□□ -2.16
PGD1YGL025C YEL075CP39972 122 aa1.56□□□□□ -2.16
PGD1YGL025C GIM4P40005 111 aaKnown RBP1.56□□□□□ -2.16
PGD1YGL025C RTR1P40084 226 aaPredicted RBP1.56□□□□□ -2.16
PGD1YGL025C HPM1P40481 377 aa1.56□□□□□ -2.16
PGD1YGL025C PRM10P42946 383 aa1.56□□□□□ -2.16
PGD1YGL025C JHD2P47156 728 aaPredicted RBP1.56□□□□□ -2.16
PGD1YGL025C RBL2P48606 106 aaKnown RBP1.56□□□□□ -2.16
PGD1YGL025C VMA10P48836 114 aaKnown RBP1.56□□□□□ -2.16
PGD1YGL025C MRH4P53166 561 aa1.56□□□□□ -2.16
PGD1YGL025C CGR1P53188 120 aa1.56□□□□□ -2.16
PGD1YGL025C SRL4Q03085 281 aa1.56□□□□□ -2.16
PGD1YGL025C MRPS17Q03246 237 aaPredicted RBP1.56□□□□□ -2.16
PGD1YGL025C PRM15Q03262 622 aa1.56□□□□□ -2.16
PGD1YGL025C GIM5Q04493 163 aa1.56□□□□□ -2.16
PGD1YGL025C YDR124WQ04608 324 aa1.56□□□□□ -2.16
PGD1YGL025C PAM18Q07914 168 aa1.56□□□□□ -2.16
PGD1YGL025C SDO1Q07953 250 aaKnown RBP1.56□□□□□ -2.16
PGD1YGL025C COQ10Q08058 207 aa1.56□□□□□ -2.16
PGD1YGL025C RTR2Q12378 196 aa1.56□□□□□ -2.16
PGD1YGL025C CMC2Q3E7A4 109 aa1.56□□□□□ -2.16
PGD1YGL025C HAP1P0CE41 1502 aa1.56□□□□□ -2.16
PGD1YGL025C XRN1P22147 1528 aaKnown RBP1.56□□□□□ -2.16
PGD1YGL025C SIN3P22579 1536 aa1.56□□□□□ -2.16
PGD1YGL025C COX5AP00424 153 aa1.55□□□□□ -2.16
PGD1YGL025C CDC7P06243 507 aa1.55□□□□□ -2.16
PGD1YGL025C SPT3P06844 337 aa1.55□□□□□ -2.16
PGD1YGL025C CNB1P25296 175 aa1.55□□□□□ -2.16
PGD1YGL025C RNA15P25299 296 aaPredicted RBP1.55□□□□□ -2.16
PGD1YGL025C TFC1P32367 649 aa1.55□□□□□ -2.16
PGD1YGL025C CPR5P35176 225 aa1.55□□□□□ -2.16
PGD1YGL025C JEN1P36035 616 aa1.55□□□□□ -2.16
PGD1YGL025C ECM31P38122 312 aa1.55□□□□□ -2.16
PGD1YGL025C URA8P38627 578 aaPredicted RBP1.55□□□□□ -2.16
PGD1YGL025C YAP3P38749 330 aa1.55□□□□□ -2.16
PGD1YGL025C BIG1P38813 335 aa1.55□□□□□ -2.16
PGD1YGL025C SMB1P40018 196 aaKnown RBP1.55□□□□□ -2.16
PGD1YGL025C YKE4P40544 346 aa1.55□□□□□ -2.16
PGD1YGL025C YIL001WP40560 513 aa1.55□□□□□ -2.16
PGD1YGL025C MSS2P40990 351 aa1.55□□□□□ -2.16
PGD1YGL025C YKR005CQ02203 525 aa1.55□□□□□ -2.16
PGD1YGL025C CTF19Q02732 369 aa1.55□□□□□ -2.16
PGD1YGL025C MRPS8Q03799 155 aa1.55□□□□□ -2.16
PGD1YGL025C COA4Q05809 96 aa1.55□□□□□ -2.16
PGD1YGL025C YPD1Q07688 167 aa1.55□□□□□ -2.16
PGD1YGL025C YLR036CQ07986 203 aa1.55□□□□□ -2.16
PGD1YGL025C YOR029WQ12243 111 aa1.55□□□□□ -2.16
PGD1YGL025C NCB2Q92317 146 aa1.55□□□□□ -2.16
PGD1YGL025C SPP41P38904 1435 aa1.55□□□□□ -2.16
PGD1YGL025C UFD4P33202 1483 aa1.55□□□□□ -2.16
PGD1YGL025C JIP3O13555 125 aa1.54□□□□□ -2.16
PGD1YGL025C NSP1P14907 823 aaKnown RBP1.54□□□□□ -2.16
PGD1YGL025C CBF1P17106 351 aa1.54□□□□□ -2.16
Retrieved 100 of 5,963 RNA–protein pairs in 117.5 ms