RNA–Protein interactions for RNA: YEL048C

TCA17, Transcript of Component of transport protein particle (TRAPP) complex II, yeastyeast

Gene TCA17, Length 459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TCA17YEL048C RPL27BP0C2H7 136 aaKnown RBP2.29□□□□□ -2.04
TCA17YEL048C CCA1P21269 546 aa2.29□□□□□ -2.04
TCA17YEL048C COG3P40094 801 aa2.29□□□□□ -2.04
TCA17YEL048C FIS1P40515 155 aa2.29□□□□□ -2.04
TCA17YEL048C ARC15P40518 154 aaRIP-Chip data2.29□□□□□ -2.04not detected
TCA17YEL048C CAT5P41735 233 aa2.29□□□□□ -2.04
TCA17YEL048C FAR7P43592 221 aa2.29□□□□□ -2.04
TCA17YEL048C YJL016WP47072 561 aa2.29□□□□□ -2.04
TCA17YEL048C BAT2P47176 376 aaKnown RBP2.29□□□□□ -2.04
TCA17YEL048C DAN1P47178 298 aa2.29□□□□□ -2.04
TCA17YEL048C YGL159WP53110 370 aa2.29□□□□□ -2.04
TCA17YEL048C PRM8P53174 237 aa2.29□□□□□ -2.04
TCA17YEL048C GET1P53192 235 aa2.29□□□□□ -2.04
TCA17YEL048C YMD8Q03697 442 aa2.29□□□□□ -2.04
TCA17YEL048C PEX12Q04370 399 aa2.29□□□□□ -2.04
TCA17YEL048C YRA1Q12159 226 aaKnown RBP2.29□□□□□ -2.04
TCA17YEL048C SIR4P11978 1358 aa2.28□□□□□ -2.04
TCA17YEL048C DRS2P39524 1355 aa2.28□□□□□ -2.04
TCA17YEL048C SAC3P46674 1301 aa2.28□□□□□ -2.04
TCA17YEL048C HTB1P02293 131 aaKnown RBP2.28□□□□□ -2.04
TCA17YEL048C HTB2P02294 131 aa2.28□□□□□ -2.04
TCA17YEL048C MGM101P32787 269 aaKnown RBP2.28□□□□□ -2.04
TCA17YEL048C TAF14P35189 244 aa2.28□□□□□ -2.04
TCA17YEL048C YPT52P36018 234 aaKnown RBP2.28□□□□□ -2.04
TCA17YEL048C NRG2P38082 220 aa2.28□□□□□ -2.04
TCA17YEL048C RPF1P38805 295 aaKnown RBP2.28□□□□□ -2.04
TCA17YEL048C BXI1P48558 297 aa2.28□□□□□ -2.04
TCA17YEL048C ALG13P53178 202 aa2.28□□□□□ -2.04
TCA17YEL048C YGR026WP53217 278 aa2.28□□□□□ -2.04
TCA17YEL048C SLM2P53955 656 aa2.28□□□□□ -2.04
TCA17YEL048C YLR030WQ07967 263 aa2.28□□□□□ -2.04
TCA17YEL048C YOR268CQ08734 132 aa2.28□□□□□ -2.04
TCA17YEL048C SAS5Q99314 248 aa2.28□□□□□ -2.04
TCA17YEL048C YDR157WA0A023PZE8 133 aa2.27□□□□□ -2.05
TCA17YEL048C COX5AP00424 153 aa2.27□□□□□ -2.05
TCA17YEL048C YPK2P18961 677 aa2.27□□□□□ -2.05
TCA17YEL048C TRM5P38793 499 aa2.27□□□□□ -2.05
TCA17YEL048C YRB2P40517 327 aa2.27□□□□□ -2.05
TCA17YEL048C GON7P46984 123 aa2.27□□□□□ -2.05
TCA17YEL048C ERV29P53337 310 aa2.27□□□□□ -2.05
TCA17YEL048C PDR17P53844 350 aa2.27□□□□□ -2.05
TCA17YEL048C RSM10Q03201 203 aa2.27□□□□□ -2.05
TCA17YEL048C YDR248CQ03786 193 aa2.27□□□□□ -2.05
TCA17YEL048C YLR179CQ06252 201 aaKnown RBP2.27□□□□□ -2.05
TCA17YEL048C BBP1Q12365 385 aa2.27□□□□□ -2.05
TCA17YEL048C YPL229WQ99395 206 aa2.27□□□□□ -2.05
TCA17YEL048C CDC28P00546 298 aaKnown RBP2.26□□□□□ -2.05
TCA17YEL048C Q0255P03881 472 aa2.26□□□□□ -2.05
TCA17YEL048C DSF1P0CX08 502 aa2.26□□□□□ -2.05
TCA17YEL048C YNR073CP0CX09 502 aa2.26□□□□□ -2.05
TCA17YEL048C MATALPHA2P0CY08 210 aa2.26□□□□□ -2.05
TCA17YEL048C HMLALPHA2P0CY09 210 aa2.26□□□□□ -2.05
TCA17YEL048C GCN3P14741 305 aa2.26□□□□□ -2.05
TCA17YEL048C RFA3P26755 122 aaKnown RBP2.26□□□□□ -2.05
TCA17YEL048C APS1P35181 156 aa2.26□□□□□ -2.05
TCA17YEL048C SRY1P36007 326 aa2.26□□□□□ -2.05
TCA17YEL048C MSA2P36157 363 aa2.26□□□□□ -2.05
TCA17YEL048C YCR087C-AP37263 153 aa2.26□□□□□ -2.05
TCA17YEL048C YAR068WP39564 161 aa2.26□□□□□ -2.05
TCA17YEL048C RPA43P46669 326 aa2.26□□□□□ -2.05
TCA17YEL048C MSA1Q08471 629 aa2.26□□□□□ -2.05
TCA17YEL048C NIP7Q08962 181 aaKnown RBP2.26□□□□□ -2.05
TCA17YEL048C CBF1P17106 351 aa2.25□□□□□ -2.05
TCA17YEL048C SCM4P32564 187 aa2.25□□□□□ -2.05
TCA17YEL048C YBR063CP38083 404 aa2.25□□□□□ -2.05
TCA17YEL048C YHL026CP38740 315 aa2.25□□□□□ -2.05
TCA17YEL048C DOG2P38773 246 aa2.25□□□□□ -2.05
TCA17YEL048C DOG1P38774 246 aa2.25□□□□□ -2.05
TCA17YEL048C YHR125WP38831 101 aa2.25□□□□□ -2.05
TCA17YEL048C MRPL49P40858 161 aaPredicted RBP2.25□□□□□ -2.05
TCA17YEL048C ATG39Q06159 398 aa2.25□□□□□ -2.05
TCA17YEL048C FCY2P17064 533 aa2.24□□□□□ -2.05
TCA17YEL048C DBF2P22204 572 aa2.24□□□□□ -2.05
TCA17YEL048C BMT5P40493 336 aa2.24□□□□□ -2.05
TCA17YEL048C COS6P53344 381 aa2.24□□□□□ -2.05
TCA17YEL048C YNL010WP53981 241 aaKnown RBP2.24□□□□□ -2.05
TCA17YEL048C TUS1Q06412 1307 aa2.23□□□□□ -2.05
TCA17YEL048C ECM33P38248 429 aaKnown RBP2.23□□□□□ -2.05
TCA17YEL048C AKR2Q12013 749 aa2.23□□□□□ -2.05
TCA17YEL048C EMC6Q12431 108 aa2.23□□□□□ -2.05
TCA17YEL048C YHR086W-AQ3E746 53 aa2.23□□□□□ -2.05
TCA17YEL048C QCR7P00128 127 aa2.22□□□□□ -2.05
TCA17YEL048C RPL9AP05738 191 aaKnown RBP2.22□□□□□ -2.05
TCA17YEL048C SEC4P07560 215 aaKnown RBP2.22□□□□□ -2.05
TCA17YEL048C OAC1P32332 324 aa2.22□□□□□ -2.05
TCA17YEL048C TCA17P32613 152 aa2.22□□□□□ -2.05
TCA17YEL048C MRPL28P36527 147 aa2.22□□□□□ -2.05
TCA17YEL048C IRC22P40006 225 aa2.22□□□□□ -2.05
TCA17YEL048C RPL9BP51401 191 aaKnown RBP2.22□□□□□ -2.05
TCA17YEL048C SNZ1Q03148 297 aa2.22□□□□□ -2.05
TCA17YEL048C TLG1Q03322 224 aa2.22□□□□□ -2.05
TCA17YEL048C LPP1Q04396 274 aa2.22□□□□□ -2.05
TCA17YEL048C MDM32Q12171 622 aa2.22□□□□□ -2.05
TCA17YEL048C RPL25P04456 142 aaKnown RBP2.21□□□□□ -2.06
TCA17YEL048C MAG1P22134 296 aaKnown RBP2.21□□□□□ -2.06
TCA17YEL048C ATG22P25568 528 aa2.21□□□□□ -2.06
TCA17YEL048C ATP7P30902 174 aa2.21□□□□□ -2.06
TCA17YEL048C VMA11P32842 164 aa2.21□□□□□ -2.06
TCA17YEL048C POP4P38336 279 aa2.21□□□□□ -2.06
TCA17YEL048C GRE3P38715 327 aaKnown RBP RIP-Chip data2.21□□□□□ -2.06not detected
Retrieved 100 of 5,963 RNA–protein pairs in 12.7 ms